Submission ID | S00036 |
Submission Date | 2022-03-21 00:00:00 |
Submission Status | reviewing |
Submitter | William Lees |
Submitter Address | Birkbeck College, University of London, Malet Street, London |
Species | Homo sapiens |
Ethnicity | UN |
Sequence | Subject | Genotype | Published | |
---|---|---|---|---|
TRBV12-1*01_C165A | CI11 | P4_I11_S1_ogrdb_report | ||
TRBV12-2*01_T187C | CI21 | P4_I16_S1_ogrdb_report | ||
TRBV20-1*02_319AGAGA323 | C10 | P4_I1_S1_ogrdb_report | ||
TRBV2*02_322GAAGC326 | C10 | P4_I1_S1_ogrdb_report | ||
TRBV12-5*01_C28G_T140A | SC1 | P4_I21_S1_ogrdb_report | A03002 | |
TRBV6-6*01_G264A | SC10 | P4_I22_S1_ogrdb_report | ||
TRBV6-9*01_A303G | SC9 | P4_I31_S1_ogrdb_report | ||
TRBV15*02_G275A | C7 | P4_I7_S1_ogrdb_report | ||
TRBV7-7*01_C315T | C9 | P4_I9_S1_ogrdb_report | A02570 | |
TRBV5-6*01_T284G | CI13 | P4_I12_S1_ogrdb_report | A02568 | |
TRBV12-4*01_C87T | S24 | P4_I24_S1_ogrdb_report | A02565 | |
TRBV19*01_A24G | S24 | P4_I24_S1_ogrdb_report | A02563 |
Repository | ENA |
Accession Number | PRJEB28370 |
Project/Study Title | Antibody repertoire analysis of Hepatitis C virus infections identifies immune signatures associated with spontaneous clearance |
Dataset URL | https://www.ebi.ac.uk/ena/browser/api/xml/PRJEB28370 |
MiAIRR Compliant? | No |
MiAIRR URL | |
Sequencing Platform | MiSeq 2x300 |
Read Length | Full |
Primers Overlapping? | No |
PubMed ID | Title | Authors |
---|---|---|
30622532 | Antibody Repertoire Analysis of Hepatitis C Virus Infections Identifies Immune Signatures Associated With Spontaneous Clearance. | Eliyahu S, Sharabi O, Elmedvi S, Timor R, Davidovich A, Vigneault F, Clouser C, Hope R, Nimer A, Braun M, Weiss YY, Polak P, Yaari G, Gal-Tanamy M |
Primer Name | Primer Sequence |
---|---|
TRA1_R1 | CACGGCAGGGTCAGGGTTC |
TRB1_R1 | CGACCTCGGGTGGGAACAC |
TRD1_R1 | ACCAGACAAGCGACATTTGTTCC |
TRG1_R1 | GGGGAAACATCTGCATCAAGTTG |
TRBV12-1*01_c165a imported to OGRDB from VDJbase with the following notes:
TRBV12-2*01_t187c imported to OGRDB from VDJbase with the following notes:
TRBV20-1*02_319agaga323 imported to OGRDB from VDJbase with the following notes:
TRBV2*02_322gaagc326 imported to OGRDB from VDJbase with the following notes:
TRBV12-5*01_c28g_t140a imported to OGRDB from VDJbase with the following notes:
TRBV6-6*01_g264a imported to OGRDB from VDJbase with the following notes:
TRBV6-9*01_a303g imported to OGRDB from VDJbase with the following notes:
TRBV15*02_g275a imported to OGRDB from VDJbase with the following notes:
TRBV7-7*01_c315t imported to OGRDB from VDJbase with the following notes: