|Submission Date||2023-01-24 00:00:00|
|Submitter Address||Birkbeck College, University of London, Malet Street, London|
The inferred novel alleles from each genotype that are submitted for review. This table lists all inferences put forward by the submitter. Where IARC has affirmed a sequence based on an inference, the corresponding sequence record will be listed in the Published column. Inferences for which no published sequence is shown have not been affirmed.
Each genotype that has been inferred, along with the descriptive name of the inference tool and settings that were used.
|Genotype Name||Subject ID||Locus||Sequence Type||Genotype Filename||Tool/Setting Name|
Individuals who should be acknowledged as contributing to the inferences listed in this submission.
Details of the repertoire from which the inferences are based. This corresponds, for example, to an NIH Project or an ENA study.
|Project/Study Title||Naive B-cell receptor heavy chain repertoire of celiac patients and healthy controls|
|Sequencing Platform||Illumina MiSeq|
Publications associated with this study.
|30733445||Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping.||Gidoni M, Snir O, Peres A, Polak P, Lindeman I, Mikocziova I, Sarna VK, Lundin KEA, Clouser C, Vigneault F, Collins AM, Sollid LM, Yaari G|
Sequences of the PCR primers used in the study.
As the protocol used was 5’ RACE, there is only one primer set.
|Primer Name||Primer Sequence|
Details of the inference tools and settings used to infer novel alleles. Each combination of tool and setting is listed here, and provided with a descriptive name.
|Tool/Settings Name||Tool Name||Tool Version|