Sequence IGHV4-30-4*i01
Details
| Species | Human |
| Species subgroup | |
| Subgroup type | |
| Sequence Name | IGHV4-30-4*i01 |
| IUIS Name | |
| Alternative names | IGHV4-30-4*p08 |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | F |
| Inference Type | Rearranged Only |
| Mapped | |
| Paralogs | |
| Paralog Rep |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
CDR delineation
| CDR1 Start | |
| CDR1 End | |
| CDR2 Start | |
| CDR2 End | |
| CDR3 Start |
Additional Information
| Sequence ID | A00009 |
| Curator | |
| Curator address | School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney Australia |
| Version | 1 |
| Release Date | 2018-12-21 |
| Release Notes | Submission published by IARC on Dec 21, 2018. |
| Locus | IGH |
| Sequence Type | V |
| Gene Subgroup | 4 |
| Gene Designation | 30-4 |
| Allele Designation | i01 |
Notes
Notes are added by IARC reviewers.
| Originally approved by IARC on April 13, 2018. “The sequence is present at high frequency (1.3%), in the IgDiscover analysis. It was inferred by IgDiscover, TIger and Partis. Haplotype analysis was supportive of the inference, as the sequence was strongly associated with the IGHJ6*03 haplotype. The sequence has previously been reported from genomic sequencing, and by inference from VDJ data, and is documented in IgPdb as IGHV4-30-4*p08. It was agreed that the sequence should be moved to Level 1.” |
Attachments
History
History logs the times and reasons for the publication of each version of this sequence.
| Mats Ohlin 2018-12-21 12:11:12 | Version 1 published Submission published by IARC on Dec 21, 2018. |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Alternative names | Inference Type | Affirmation Level | Species subgroup | Subgroup type | Version | Date |
|---|---|---|---|---|---|---|---|---|
| IGHV4-30-4*i01 | IGHV4-30-4*p08 | Rearranged Only | 1 | 1 | 2018-12-21 | |||
| IGHV4-30-4*i01 | IGHV4-30-4*p08 | Rearranged Only | 1 | 2 | 2019-04-03 | |||
| IGHV4-30-4*i01 | IGHV4-30-4*p08 | Rearranged Only | 1 | 3 | 2019-04-12 | |||
| IGHV4-30-4*i01 | IGHV4-30-4*08 | IGHV4-30-4*p08 | Rearranged Only | 1 | 4 | 2019-05-16 | ||
| IGHV4-30-4*08 | IGHV4-30-4*08 | IGHV4-30-4*i01 | Rearranged Only | 1 | 5 | 2023-07-10 |