Species | Human |
Species subgroup | |
Subgroup type | |
Sequence Name | IGHV3-43D*i01 |
IUIS Name | IGHV3-43D*04 |
Alternative names | |
Affirmation Level | 1 |
Full Sequence | |
Coding Sequence | |
Functionality | F |
Inference Type | Rearranged Only |
Alternative names | |
Paralogs |
The table below lists the submissions, and the inferences within them, on which this published sequence is based. The list may be short when the sequence is first published, containing, for example, reference to just a single submission, but is expected to grow over time as additional inferences are submitted.
'Sequence Match' indicates whether the inference exactly matches the sequence, and clicking on the tick or cross will provide an alignment. Mismatches may be caused, for example, by the inclusion of leader sequences, or nucleotides in the inference which do not in IARC's opinion have sufficient evidence for inclusion in the sequence.
Submission ID | Accession No | Subject ID | Genotype Name | Sequence Name | Sequence Match |
---|---|---|---|---|---|
S00003 | BK010573 | IB | Genotype - with Database 3 | IGHV3-43D*01_S3103 |
Sequences in other published genotypes which have been identified by IARC and support the inference:
Inferred sequences in VDJbase that match this sequence:
Un-rearranged sequence observations that support this sequence:
Sequence ID | A00005 |
Curator address | School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney Australia |
Version | 2 |
Release Date | 2019-04-12 |
Release Notes | In line with IARC policy, the submitted sequence was recognized up to and including nucleotide 321. A trailing “.” indicates IARC’s opinion that the sequences likely to contain an additional/additional 3’ nucleotide(s) for which there is insufficient evidence to make an affirmation. |
Locus | IGH |
Sequence Type | V |
Gene Subgroup | 3 |
Gene Designation | 43D |
Allele Designation | i01 |
Notes are added by IARC reviewers.
Originally approved by IARC on May 11, 2018. “The sequence is present at low frequency (0.07%), in the IgDiscover analysis. It was inferred by IgDiscover. No information was provided by the submitter regarding analysis with partis or TIgGER. Haplotype analysis could not be performed. Analysis for chimerism did not provide evidence against the existence of the sequence. It was agreed that the sequence should be moved to Level 1, subject to the provision of additional information.” Further deliberation on May 25, 2018 The allele was incorporated into IMGT on October 4, 2018 as IGHV3-43D*04. (April 12, 2019) In line with IARC policy, the submitted sequence was recognized up to and including nucleotide 321. A trailing “.” indicates IARC’s opinion that the sequences likely to contain an additional/additional 3’ nucleotide(s) for which there is insufficient evidence to make an affirmation. |
History logs the times and reasons for the publication of each version of this sequence.
Mats Ohlin 2018-12-21 12:10:41 | Version 1 published Submission published by IARC on Dec 21, 2018. |
Mats Ohlin 2019-04-12 14:33:49 | Version 2 published In line with IARC policy, the submitted sequence was recognized up to and including nucleotide 321. A trailing “.” indicates IARC’s opinion that the sequences likely to contain an additional/additional 3’ nucleotide(s) for which there is insufficient evidence to make an affirmation. |
v1 | v2 | |
---|---|---|
Full Sequence | ||
Coding Sequence | ||
Notes | changed |
All published versions of this sequence.
Sequence Name | IMGT Name | Alternative names | Inference Type | Affirmation Level | Species subgroup | Subgroup type | Version | Date |
---|---|---|---|---|---|---|---|---|
IGHV3-43D*i01 | IGHV3-43D*04 | Rearranged Only | 1 | 1 | 2018-12-21 | |||
IGHV3-43D*i01 | IGHV3-43D*04 | Rearranged Only | 1 | 2 | 2019-04-12 |