| Species | Homo sapiens |
| Species subgroup | |
| Subgroup type | |
| Sequence Name | IGLV10-54*i01 |
| IUIS Name | IGLV10-54*04 |
| Alternative names | |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | F |
| Inference Type | Rearranged Only |
| Mapped | |
| Paralogs | |
| Paralog Rep |
Un-rearranged sequence observations that support this sequence:
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
| CDR1 Start | 76 |
| CDR1 End | 99 |
| CDR2 Start | 151 |
| CDR2 End | 159 |
| CDR3 Start | 268 |
| Sequence ID | A00055 |
| Curator | |
| Curator address | School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney Australia |
| Version | 1 |
| Release Date | 2020-07-30 |
| Release Notes | Submission published by IARC on July 30th 2020. |
| Locus | IGL |
| Sequence Type | V |
| Gene Subgroup | 10 |
| Gene Designation | 54 |
| Allele Designation | i01 |
| Gene start | 1 |
| Gene end | 294 |
Notes are added by IARC reviewers.
| The sequence was first affirmed at IARC Meeting 53 on April 14th 2020, where it was noted: “The sequence was seen in 1.79% of all unmutated rearrangements, with 11279 sequences including 2138 perfect matches to the inferred allele. There was abundant variation in the CDR3 regions of the aligned sequences. The IGLV10-54*01 allele was also present in the genotype, at a similar frequency (1.77% of all unmutated sequences; 7826 sequences; 2117 unmutated sequences). Haplotype data is unavailable. Plots of the final 3’ nucleotides showed a high level of variability, making it impossible to determine the final three nucleotides with certainty. The sequence, up to and including nucleotide 339, was affirmed as a Level 1 sequence. Uncertainty regarding nucleotides 340-341 will be indicated in IARC and OGRDB publications by two dots at the end of the affirmed sequence.” |
History logs the times and reasons for the publication of each version of this sequence.
| Andrew Collins 2020-07-30 12:58:46 | Version 1 published Submission published by IARC on July 30th 2020. |
| Mats Ohlin 2021-04-29 22:33:15 | IMGT Name updated to IGLV10-54*04 IMGT Name updated. |
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGLV10-54*i01 | IGLV10-54*04 | 1 | 2020-07-30 |
| IGLV10-54*04 | IGLV10-54*04 | 2 | 2023-07-10 |
| IGLV10-54*04 | IGLV10-54*04 | 3 | 2024-02-22 |