Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGLV5-48*02
IUIS NameIGLV5-48*02
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityP
Inference TypeGenomic Only
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
AC245291NonlocationalGenBank137222137754
Gibson:HG02572LocationalGenBank1533
GRCh38:NC_000022.11LocationalGenBank326865327397

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start258
CDR1 End284
CDR2 Start336
CDR2 End356
CDR3 Start471

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGCCTGGACTCCTCTCCTTCTCCTGTTCCTCTCTCACTGCACAG
L-PART2 Start172
L-PART2 End182
L_PART2GTTCCCTCTCG
v_rs_start495
v_rs_end533
V_HEPTAMERCACAGTG
V_NONAMERACGAAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02942
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGL
Sequence TypeV
Gene Subgroup5
Gene Designation48
Allele Designation02

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AC245291

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:48
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGLV5-48*02IGLV5-48*02Genomic Only112023-07-10