Species | Human |
Species subgroup | |
Subgroup type | |
Sequence Name | IGLV5-48*02 |
IUIS Name | IGLV5-48*02 |
Alternative names | |
Affirmation Level | 1 |
Full Sequence | |
Coding Sequence | |
Functionality | P |
Inference Type | Genomic Only |
Mapped | True |
Paralogs | |
Paralog Rep | False |
Un-rearranged sequence observations that support this sequence:
Accession | Type | Repository | Start | End |
---|---|---|---|---|
AC245291 | Nonlocational | GenBank | 137222 | 137754 |
Gibson:HG02572 | Locational | GenBank | 1 | 533 |
GRCh38:NC_000022.11 | Locational | GenBank | 326865 | 327397 |
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
CDR1 Start | 258 |
CDR1 End | 284 |
CDR2 Start | 336 |
CDR2 End | 356 |
CDR3 Start | 471 |
UTR 5' Start | |
UTR 5' End | |
L-PART1 Start | 1 |
L-PART1 End | 46 |
L_PART1 | ATGGCCTGGACTCCTCTCCTTCTCCTGTTCCTCTCTCACTGCACAG |
L-PART2 Start | 172 |
L-PART2 End | 182 |
L_PART2 | GTTCCCTCTCG |
v_rs_start | 495 |
v_rs_end | 533 |
V_HEPTAMER | CACAGTG |
V_NONAMER | ACGAAAACC |
3' Extension | |
3' start | |
3' end | |
5' start | |
5' end |
Sequence ID | A02942 |
Curator | William Lees |
Curator address | Birkbeck College, University of London, Malet Street, London |
Version | 1 |
Release Date | 2023-07-10 |
Release Notes | Bulk upload of sequences for the AIRR-C Human IG germline sets |
Locus | IGL |
Sequence Type | V |
Gene Subgroup | 5 |
Gene Designation | 48 |
Allele Designation | 02 |
Notes are added by IARC reviewers.
Information for this sequence was imported into OGRDB via bulk update with the following notes: |
History logs the times and reasons for the publication of each version of this sequence.
William Lees 2023-07-10 11:24:48 | Version 1 published Bulk upload of sequences for the AIRR-C Human IG germline sets |
All published versions of this sequence.
Sequence Name | IMGT Name | Alternative names | Inference Type | Affirmation Level | Species subgroup | Subgroup type | Gene start | Gene end | UTR 5' Start | UTR 5' End | L-PART1 Start | L-PART1 End | L-PART2 Start | L-PART2 End | CDR1 Start | CDR1 End | CDR2 Start | CDR2 End | CDR3 Start | v_rs_start | v_rs_end | d_rs_3_prime_start | d_rs_3_prime_end | d_rs_5_prime_start | d_rs_5_prime_end | j_rs_start | j_rs_end | Codon Frame | Version | Date |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
IGLV5-48*02 | IGLV5-48*02 | Genomic Only | 1 | 183 | 494 | 1 | 46 | 172 | 182 | 258 | 284 | 336 | 356 | 471 | 495 | 533 | 1 | 2023-07-10 |