Sequence IGHD5-5*01
Details
| Species | Homo sapiens |
| Species subgroup | |
| Subgroup type | |
| Sequence Name | IGHD5-5*01 |
| IUIS Name | IGHD5-5*01 |
| Alternative names | |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | ORF |
| Inference Type | Unrearranged Only |
| Mapped | True |
| Paralogs | IGHD5-18*01 |
| Paralog Rep | True |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
| Accession | Type | Repository | Start | End |
|---|---|---|---|---|
| X97051 | Nonlocational | GenBank | 40919 | 40994 |
| AB019441 | Nonlocational | GenBank | 111378 | 111453 |
| ON052113 | Nonlocational | GenBank | 135 | 210 |
| GRCh38:CM000676.2 | Locational | GenBank | 967541 | 967616 |
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
Non-Core Regions
| d_rs_3_prime_start | 49 |
| d_rs_3_prime_end | 76 |
| d_rs_5_prime_start | 1 |
| d_rs_5_prime_end | 28 |
| D_3_HEPTAMER | CACAGTG |
| D_3_NONAMER | GCAGCAACC |
| D_5_HEPTAMER | GACTGTG |
| D_5_NONAMER | GGTTATTGT |
Additional Information
| Sequence ID | A02633 |
| Curator | William Lees |
| Curator address | Birkbeck College, University of London, Malet Street, London |
| Version | 1 |
| Release Date | 2023-07-10 |
| Release Notes | Bulk upload of sequences for the AIRR-C Human IG germline sets |
| Locus | IGH |
| Sequence Type | D |
| Gene Subgroup | 5 |
| Gene Designation | 5 |
| Allele Designation | 01 |
| Gene start | 29 |
| Gene end | 48 |
Notes
Notes are added by IARC reviewers.
| Information for this sequence was imported into OGRDB via bulk update with the following notes: |
Attachments
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2023-07-10 11:24:34 | Version 1 published Bulk upload of sequences for the AIRR-C Human IG germline sets |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGHD5-5*01 | IGHD5-5*01 | 1 | 2023-07-10 |