Sequence IGKV2D-40*02
Details
| Species | Homo sapiens |
| Species subgroup | |
| Subgroup type | |
| Sequence Name | IGKV2D-40*02 |
| IUIS Name | IGKV2D-40*02 |
| Alternative names | |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | ORF |
| Inference Type | Unrearranged |
| Mapped | True |
| Paralogs | |
| Paralog Rep | False |
Observations in VDJbase
Inferred sequences in VDJbase that match this sequence:
| VDJbase Allele Name | Subjects | Sequence Match |
|---|---|---|
| IGKV2D-40*01_c195t | 2 |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
| Accession | Type | Repository | Start | End | Coding Sequence | SC Coding Sequence |
|---|---|---|---|---|---|---|
| SRR26518958 | V | Genbank | 1 | 764 |
CDR delineation
| CDR1 Start | 510 |
| CDR1 End | 545 |
| CDR2 Start | 597 |
| CDR2 End | 605 |
| CDR3 Start | 714 |
Non-Core Regions
| UTR 5' Start | |
| UTR 5' End | |
| L-PART1 Start | 1 |
| L-PART1 End | 49 |
| L_PART1 | ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCTG |
| L-PART2 Start | 421 |
| L-PART2 End | 431 |
| L_PART2 | GATCCAGTGAG |
| v_rs_start | 737 |
| v_rs_end | 764 |
| V_HEPTAMER | CACAGTG |
| V_NONAMER | ACAGAAACC |
| Exon 1 Start | |
| Exon 1 End | |
| Exon 2 Start | |
| Exon 2 End | |
| Exon 3 Start | |
| Exon 3 End | |
| Exon 4 Start | |
| Exon 4 End | |
| Exon 5 Start | |
| Exon 5 End | |
| Exon 6 Start | |
| Exon 6 End | |
| Exon 7 Start | |
| Exon 7 End | |
| Exon 8 Start | |
| Exon 8 End | |
| Exon 9 Start | |
| Exon 9 End | |
| UTR 3' Start | |
| UTR 3' End |
Extension
| 3' Extension | |
| 3' start | |
| 3' end | |
| 5' start | |
| 5' end |
Additional Information
| Sequence ID | A08736 |
| Curator | William Lees |
| Curator address | Clareo Biosciences, Louisville, Kentucky, USA |
| Version | 1 |
| Release Date | 2026-05-27 |
| Release Notes | Repeat – had to roll back yesterday’s changes. Added genomic evidence from VDJbase study P27 (PMID38844673), including leaders/RSS for many sequences and additional alleles that currently have IUIS/IMGT names |
| Locus | IGK |
| Sequence Type | V |
| Gene Subgroup | 2D |
| Gene Designation | 40 |
| Allele Designation | 02 |
| Gene start | 432 |
| Gene end | 736 |
Notes
Notes are added by IARC reviewers.
| Information for this sequence was imported into OGRDB via bulk update with the following notes: |
Attachments
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2026-05-27 08:07:27 | Version 1 published Repeat – had to roll back yesterday’s changes. Added genomic evidence from VDJbase study P27 (PMID38844673), including leaders/RSS for many sequences and additional alleles that currently have IUIS/IMGT names |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGKV2D-40*02 | IGKV2D-40*02 | 1 | 2026-05-27 |