Germline Sets
For information on the names and approach used in these sets, please see our poster.
For tools to help with the adoption of the new name format, please see receptor-germline-tools.
The OGRDB REST API allows you to list and download germline sets programatically.
Mouse
IGKJ genes for use with all strains
As published in Kos et al. (2022) (in preparation)
IGLJ genes for use with all strains
As published in Kos et al. (2022) (in preparation)
Mouse strain 129S1/SvImJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain A/J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain AKR/J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain BALB/c
The germline set is based on sequences published in Jackson et al. (2022) (DOI: 10.3389/fimmu.2022.888555)
Mouse strain BALB/c/ByJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain C3H/HeJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain C57BL/6
The germline set is based on sequences published in Jackson et al. (2022) (DOI: 10.3389/fimmu.2022.888555)
Mouse strain C57BL/6J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain CAST/EiJ
The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain CBA/J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain DBA/1J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain DBA/2J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain LEWES/EiJ
The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain MRL/MpJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain MSM/MsJ
The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain NOD/ShiLtJ
The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain NOR/LtJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain NZB/BlNJ
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain PWD/PhJ
The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
Mouse strain SJL/J
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
The germline set is based on sequences published in Kos et al. (2022) (in preparation)
For information on the names and approach used in these sets, please see our poster.
For tools to help with the adoption of the new name format, please see receptor-germline-tools.
The OGRDB REST API allows you to list and download germline sets programatically.