Sequence IGLV-COOR
Details
| Species | Mus musculus |
| Species subgroup | MSM/MsJ |
| Subgroup type | strain |
| Sequence Name | IGLV-COOR |
| IUIS Name | |
| Alternative names | Kos et al: IGLV6*03_MSM |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | F |
| Inference Type | Rearranged Only |
| Mapped | False |
| Paralogs | |
| Paralog Rep | False |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
No Items
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
CDR delineation
| CDR1 Start | 76 |
| CDR1 End | 99 |
| CDR2 Start | 151 |
| CDR2 End | 159 |
| CDR3 Start | 274 |
Non-Core Regions
| Exon 1 Start | |
| Exon 1 End | |
| Exon 2 Start | |
| Exon 2 End | |
| Exon 3 Start | |
| Exon 3 End | |
| Exon 4 Start | |
| Exon 4 End | |
| Exon 5 Start | |
| Exon 5 End | |
| Exon 6 Start | |
| Exon 6 End | |
| Exon 7 Start | |
| Exon 7 End | |
| Exon 8 Start | |
| Exon 8 End | |
| Exon 9 Start | |
| Exon 9 End | |
| UTR 3' Start | |
| UTR 3' End |
Additional Information
| Sequence ID | A00350 |
| Curator | William Lees |
| Curator address | Birkbeck College, University of London, Malet Street, London |
| Version | 2 |
| Release Date | 2026-03-28 |
| Release Notes | Replaced with full sequence derived from SRR32426572 |
| Locus | IGL |
| Sequence Type | V |
| Gene Subgroup | |
| Gene Designation | |
| Allele Designation | |
| Gene start | 1 |
| Gene end | 294 |
Notes
Notes are added by IARC reviewers.
| Imported to OGRDB with the following notes: |
Attachments
No Items
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2022-05-03 11:39:24 | Version 1 published This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1 |
| William Lees 2026-03-28 14:36:24 | Version 2 published Replaced with full sequence derived from SRR32426572 |
Changes from previous version
| v1 | v2 | |
|---|---|---|
| Mapped | False | |
| Gene Subgroup | ||
| Gene Designation | ||
| Allele Designation | ||
| Full Sequence | ||
| Coding Sequence | ||
| SC Coding Sequence | None | None |
| Gene end | 245 | 294 |
| CDR3 Start | 246 | 274 |
| Codon Frame | 1 | |
| Paralogs | ||
| Paralog Rep | False | |
| curational_tags | none |