Sequence IGKV-N7YY
Details
| Species | Mus musculus |
| Species subgroup | SJL/J |
| Subgroup type | strain |
| Sequence Name | IGKV-N7YY |
| IUIS Name | Musmus IGKV4-52*01 ORF, or Musmus IGKV4-54*01 ORF |
| Alternative names | Kos et al: IGKV4-52*01_SJL |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | ORF |
| Inference Type | Rearranged Only |
| Mapped | |
| Paralogs | |
| Paralog Rep |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
CDR delineation
| CDR1 Start | 79 |
| CDR1 End | 93 |
| CDR2 Start | 145 |
| CDR2 End | 153 |
| CDR3 Start | 262 |
Non-Core Regions
| Exon 1 Start | |
| Exon 1 End | |
| Exon 2 Start | |
| Exon 2 End | |
| Exon 3 Start | |
| Exon 3 End | |
| Exon 4 Start | |
| Exon 4 End | |
| Exon 5 Start | |
| Exon 5 End | |
| Exon 6 Start | |
| Exon 6 End | |
| Exon 7 Start | |
| Exon 7 End | |
| Exon 8 Start | |
| Exon 8 End | |
| Exon 9 Start | |
| Exon 9 End | |
| UTR 3' Start | |
| UTR 3' End |
Additional Information
| Sequence ID | A00654 |
| Curator | William Lees |
| Curator address | Birkbeck College, University of London, Malet Street, London |
| Version | 1 |
| Release Date | 2022-05-03 |
| Release Notes | This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1 |
| Locus | IGK |
| Sequence Type | V |
| Gene Subgroup | |
| Gene Designation | |
| Allele Designation | |
| Gene start | 1 |
| Gene end | 286 |
Notes
Notes are added by IARC reviewers.
| Imported to OGRDB with the following notes: |
Attachments
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2022-05-03 12:35:09 | Version 1 published This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1 |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGKV-N7YY | Musmus IGKV4-52*01 ORF, or Musmus IGKV4-54*01 ORF | 1 | 2022-05-03 |