Sequence IGHJ3-XRNC*01
Details
| Species | Macaca mulatta |
| Species subgroup | |
| Subgroup type | |
| Sequence Name | IGHJ3-XRNC*01 |
| IUIS Name | |
| Alternative names | kimdb: IGHJ3-2*01; rhgldb+: IGHJ3*01; imgt: IGHJ3*01 |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | F |
| Inference Type | Unrearranged and rearranged |
| Mapped | False |
| Paralogs | |
| Paralog Rep | False |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
| Accession | Type | Repository | Start | End | Coding Sequence | SC Coding Sequence |
|---|---|---|---|---|---|---|
| 10.5281/zenodo.18156194 RAi15_h1tg001105l | J | VDJbase | 12929 | 13017 |
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
Non-Core Regions
| j_rs_start | 1 |
| j_rs_end | 39 |
| J_HEPTAMER | CCCTGTG |
| J_NONAMER | GGTTTGTGT |
| Exon 1 Start | |
| Exon 1 End | |
| Exon 2 Start | |
| Exon 2 End | |
| Exon 3 Start | |
| Exon 3 End | |
| Exon 4 Start | |
| Exon 4 End | |
| Exon 5 Start | |
| Exon 5 End | |
| Exon 6 Start | |
| Exon 6 End | |
| Exon 7 Start | |
| Exon 7 End | |
| Exon 8 Start | |
| Exon 8 End | |
| Exon 9 Start | |
| Exon 9 End | |
| UTR 3' Start | |
| UTR 3' End |
Additional Information
| Sequence ID | A05657 |
| Curator | William Lees |
| Curator address | Clareo Biosciences, Louisville, Kentucky, USA |
| Version | 1 |
| Release Date | 2026-01-06 |
| Release Notes | First version of the macaque IGH germline set. |
| Locus | IGH |
| Sequence Type | J |
| Gene Subgroup | 3 |
| Gene Designation | XRNC |
| Allele Designation | 01 |
| Gene start | 40 |
| Gene end | 89 |
| Codon Frame | 2 |
| J CDR3 End | 17 |
Notes
Notes are added by IARC reviewers.
| Information for this sequence was imported into OGRDB via bulk update with the following notes: |
Attachments
No Items
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2026-01-06 16:41:18 | Version 1 published First version of the macaque IGH germline set. |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGHJ3-XRNC*01 | 1 | 2026-01-06 |