Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGKJ3*01
IUIS NameIGKJ3*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic and rearranged
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
AH002839NonlocationalGenBank880955
NG_000834NonlocationalGenBank480405480480
GRCh38:NC_000002.12LocationalGenBank13779461377871

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

j_rs_start1
j_rs_end38
J_HEPTAMER
J_NONAMERGGTTTTTGT

Additional Information

Sequence IDA02792
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version2
Release Date2024-10-12
Release Notes

J gene metadata updated to conform to MiAIRR standards

LocusIGK
Sequence TypeJ
Gene Subgroup3
Gene Designation
Allele Designation01
Gene start39
Gene end76
Codon Frame2
J CDR3 End8

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AH002839
VDJbase example haplotype: P1_I10

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:42
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

William Lees
2024-10-12 11:14:13
Version 2 published

J gene metadata updated to conform to MiAIRR standards

Changes from previous version

v1v2
Codon Frame12
J CDR3 End768

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGKJ3*01IGKJ3*0112023-07-10
IGKJ3*01IGKJ3*0122024-10-12