Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGHJ6*02
IUIS NameIGHJ6*02
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic and rearranged
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
X97051NonlocationalGenBank8972289822
ON023006NonlocationalGenBank30130

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

j_rs_start1
j_rs_end38
J_HEPTAMER
J_NONAMERGGTTTTTGT

Additional Information

Sequence IDA02644
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version2
Release Date2024-10-12
Release Notes

J gene metadata updated to conform to MiAIRR standards

LocusIGH
Sequence TypeJ
Gene Subgroup6
Gene Designation
Allele Designation02
Gene start39
Gene end101
Codon Frame3
J CDR3 End30

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample X97051
VDJbase example haplotype: P1_I100

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:34
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

William Lees
2024-10-12 11:14:12
Version 2 published

J gene metadata updated to conform to MiAIRR standards

Changes from previous version

v1v2
Codon Frame23
J CDR3 End10130

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGHJ6*02IGHJ6*0212023-07-10
IGHJ6*02IGHJ6*0222024-10-12