Details

SpeciesHuman
Species subgroup
Subgroup typenone
Sequence NameIGLV6-57*03
IUIS NameIGLV6-57*03
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedFalse
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
Gibson:HG02059LocationalGenBank1517

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start258
CDR1 End281
CDR2 Start333
CDR2 End341
CDR3 Start456

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGCCTGGGCTCCACTACTTCTCACCCTCCTCGCTCACTGCACAG
L-PART2 Start172
L-PART2 End182
L_PART2GTTCTTGGGCC
v_rs_start479
v_rs_end517
V_HEPTAMERCACAGTG
V_NONAMERACAGAAACT

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02946
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version2
Release Date2024-02-22
Release Notes

Supporting sequence and annotation updated

LocusIGL
Sequence TypeV
Gene Subgroup6
Gene Designation57
Allele Designation03

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample Gibson:HG02059

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:48
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

William Lees
2024-02-22 15:40:44
Version 2 published

Supporting sequence and annotation updated

Changes from previous version

v1v2
Subgroup typenone
L-PART1 Start1
L-PART1 End46
Codon Frame1
3' Extension
5' Extension

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGLV6-57*03IGLV6-57*03Genomic Only112023-07-10
IGLV6-57*03IGLV6-57*03Genomic Only1none22024-02-22