Details

SpeciesHuman
Species subgroup
Subgroup typenone
Sequence NameIGLV3-22*03
IUIS NameIGLV3-22*03
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedFalse
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
Gibson:NA18555LocationalGenBank65593

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start282
CDR1 End299
CDR2 Start351
CDR2 End359
CDR3 Start468

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGCATGGGCCACACTCCTGCTCCCACTCCTCAACCTCTACACAG
L-PART2 Start196
L-PART2 End206
L_PART2GCTCTGTTGCC
v_rs_start491
v_rs_end529
V_HEPTAMERCTCAGTG
V_NONAMERACACAAACT

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02923
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version2
Release Date2024-02-22
Release Notes

Supporting sequence and annotation updated

LocusIGL
Sequence TypeV
Gene Subgroup3
Gene Designation22
Allele Designation03

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample Gibson:NA18555

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:47
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

William Lees
2024-02-22 15:38:05
Version 2 published

Supporting sequence and annotation updated

Changes from previous version

v1v2
Subgroup typenone
Full Sequence
Gene start271207
Gene end554490
L-PART1 Start1
L-PART1 End46
L-PART2 Start260196
L-PART2 End270206
CDR1 Start346282
CDR1 End363299
CDR2 Start415351
CDR2 End423359
CDR3 Start532468
v_rs_start555491
v_rs_end593529
Codon Frame1
3' Extension
5' Extension

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGLV3-22*03IGLV3-22*03Genomic Only112023-07-10
IGLV3-22*03IGLV3-22*03Genomic Only1none22024-02-22