Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGHV4-28*07
IUIS NameIGHV4-28*07
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedFalse
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
GRCh38:CM000676.2LocationalGenBank555157555630

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start215
CDR1 End241
CDR2 Start293
CDR2 End313
CDR3 Start428

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGAT
L-PART2 Start129
L-PART2 End139
L_PART2GGGTCCTGTCC
v_rs_start436
v_rs_end474
V_HEPTAMERCACAGTG
V_NONAMERACACAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02980
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-08-15
Release Notes

Sequences added following discussion at IARC meeting on 9th August 2023

LocusIGH
Sequence TypeV
Gene Subgroup4
Gene Designation28
Allele Designation07
Gene start140
Gene end435

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample GRCh38:CM000676.2. Sequence observed in data from Rodriguez et al.
2023 as reported in VDJbase (1 samples). Example subject: P25_I16.

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-08-15 12:54:49
Version 1 published

Sequences added following discussion at IARC meeting on 9th August 2023

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGHV4-28*07IGHV4-28*0712023-08-15