Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGHV3-25*05
IUIS NameIGHV3-25*05
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityP
Inference TypeGenomic Only
MappedFalse
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
HM855413NonlocationalGenBank1328

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start104
CDR1 End127
CDR2 Start179
CDR2 End202
CDR3 Start317

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start
L-PART1 End
L_PART1
L-PART2 Start18
L-PART2 End28
L_PART2GTGTCCAGTGT
v_rs_start325
v_rs_end353
V_HEPTAMER
V_NONAMER

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02973
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-08-15
Release Notes

Sequences added following discussion at IARC meeting on 9th August 2023

LocusIGH
Sequence TypeV
Gene Subgroup3
Gene Designation25
Allele Designation05

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample HM855413. Sequence observed in data from Rodriguez et al.
2023 as reported in VDJbase (30 samples). Example subject: P25_I7.

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-08-15 12:54:49
Version 1 published

Sequences added following discussion at IARC meeting on 9th August 2023

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGHV3-25*05IGHV3-25*05Genomic Only112023-08-15