Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGLV5-48*01
IUIS NameIGLV5-48*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
Z73649NonlocationalGenBank1312
D87016NonlocationalGenBank2296423495
Gibson:HG02059LocationalGenBank1532

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start257
CDR1 End283
CDR2 Start335
CDR2 End355
CDR3 Start470

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGCCTGGAATCCTCTCCTCCTCCTGTTCCTCTCTCACTGCACAG
L-PART2 Start171
L-PART2 End181
L_PART2GTTCCCTCTCG
v_rs_start494
v_rs_end532
V_HEPTAMERTACAGTG
V_NONAMERACAAAAACT

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02941
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGL
Sequence TypeV
Gene Subgroup5
Gene Designation48
Allele Designation01

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample D87016

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:48
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGLV5-48*01IGLV5-48*01Genomic Only112023-07-10