Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGLV3-1*01
IUIS NameIGLV3-1*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
Z22208NonlocationalGenBank1285
AC245028NonlocationalGenBank5877859451
D87023NonlocationalGenBank63577030
Gibson:HG01106LocationalGenBank53726
GRCh38:NC_000022.11LocationalGenBank854683855356

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start426
CDR1 End443
CDR2 Start495
CDR2 End503
CDR3 Start612

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAG
L-PART2 Start340
L-PART2 End350
L_PART2GATCCGTGGCC
v_rs_start636
v_rs_end674
V_HEPTAMERCACAGTG
V_NONAMERACAGAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02910
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGL
Sequence TypeV
Gene Subgroup3
Gene Designation1
Allele Designation01

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AC245028

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:47
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGLV3-1*01IGLV3-1*01Genomic Only112023-07-10