Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGKV2D-28*01
IUIS NameIGKV2D-28*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedTrue
ParalogsIGKV2-28*01
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
X93632NonlocationalGenBank1302
AC245506NonlocationalGenBank122442123205
AC244255NonlocationalGenBank8998890751
NG_000833NonlocationalGenBank288078288841
GRCh38:NC_000002.12LocationalGenBank11026551103418

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start513
CDR1 End545
CDR2 Start597
CDR2 End605
CDR3 Start714

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End49
L_PART1ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTG
L-PART2 Start424
L-PART2 End434
L_PART2GATCCAGTGGG
v_rs_start737
v_rs_end764
V_HEPTAMERCACAGTG
V_NONAMERACAGAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02839
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGK
Sequence TypeV
Gene Subgroup2D
Gene Designation28
Allele Designation01
Gene start435
Gene end736

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AC245506

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:44
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGKV2D-28*01IGKV2D-28*0112023-07-10