Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGKV2D-24*01
IUIS NameIGKV2D-24*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic and rearranged
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
X93634NonlocationalGenBank1302
AC245506NonlocationalGenBank7756178393
NG_000833NonlocationalGenBank243197244029
GRCh38:NC_000002.12LocationalGenBank11475461148299

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start582
CDR1 End614
CDR2 Start666
CDR2 End674
CDR3 Start783

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End49
L_PART1ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTG
L-PART2 Start493
L-PART2 End503
L_PART2GATCCAGTGGG
v_rs_start806
v_rs_end833
V_HEPTAMERCACAGTG
V_NONAMERACAAAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02837
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGK
Sequence TypeV
Gene Subgroup2D
Gene Designation24
Allele Designation01
Gene start504
Gene end805

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AC245506
VDJbase example haplotype: P1_I74 (5 seq)

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:44
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGKV2D-24*01IGKV2D-24*0112023-07-10