Details

SpeciesHomo sapiens
Species subgroup
Subgroup type
Sequence NameIGHV2-5*01
IUIS NameIGHV2-5*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic and rearranged
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
AB019440NonlocationalGenBank194964195446
MG719330NonlocationalGenBank59541

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start219
CDR1 End248
CDR2 Start300
CDR2 End320
CDR3 Start435

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start1
L-PART1 End46
L_PART1ATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCAT
L-PART2 Start133
L-PART2 End143
L_PART2GGGTCTTGTCC
v_rs_start445
v_rs_end483
V_HEPTAMERCACAAAG
V_NONAMERACAAAAACC

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA02679
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGH
Sequence TypeV
Gene Subgroup2
Gene Designation5
Allele Designation01
Gene start144
Gene end444

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample AB019440
VDJbase example haplotype: P1_I43

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:36
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGHV2-5*01IGHV2-5*0112023-07-10