Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGHD3-9*01
IUIS NameIGHD3-9*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic and rearranged
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
X97051NonlocationalGenBank4848448570
AB019441NonlocationalGenBank118944119030
ON052106NonlocationalGenBank239325
GRCh38:CM000676.2LocationalGenBank975106975192

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

d_rs_3_prime_start60
d_rs_3_prime_end87
d_rs_5_prime_start1
d_rs_5_prime_end28
D_3_HEPTAMERCACAGTG
D_3_NONAMERTCAAAAACC
D_5_HEPTAMERCACTGTG
D_5_NONAMERGGTTTAGAA

Additional Information

Sequence IDA02625
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGH
Sequence TypeD
Gene Subgroup3
Gene Designation9
Allele Designation01

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample X97051
VDJbase example haplotype: P1_I100

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:34
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGHD3-9*01IGHD3-9*01Genomic and rearranged112023-07-10