Details

SpeciesHuman
Species subgroup
Subgroup type
Sequence NameIGHD1-20*01
IUIS NameIGHD1-20*01
Alternative names
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeGenomic Only
MappedTrue
Paralogs
Paralog RepFalse

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

AccessionTypeRepositoryStartEnd
X97051NonlocationalGenBank6198762059
AB019441NonlocationalGenBank132446132518
ON052095NonlocationalGenBank141213
GRCh38:CM000676.2LocationalGenBank988610988682

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

d_rs_3_prime_start46
d_rs_3_prime_end73
d_rs_5_prime_start1
d_rs_5_prime_end28
D_3_HEPTAMERCACCGTG
D_3_NONAMERTCCAAAACT
D_5_HEPTAMERCACAGTG
D_5_NONAMERGGATTCTGA

Additional Information

Sequence IDA02611
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2023-07-10
Release Notes

Bulk upload of sequences for the AIRR-C Human IG germline sets

LocusIGH
Sequence TypeD
Gene Subgroup1
Gene Designation20
Allele Designation01

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Information for this sequence was imported into OGRDB via bulk update with the following notes:
Sequence annotation is based on Genbank sample X97051

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2023-07-10 11:24:33
Version 1 published

Bulk upload of sequences for the AIRR-C Human IG germline sets

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGHD1-20*01IGHD1-20*01Genomic Only112023-07-10