Details

SpeciesMouse
Species subgroupMSM/MsJ
Subgroup typestrain
Sequence NameIGHD-2ZLC
IUIS NameIGHD2-5*01|Mus_musculus_CB.20,IGHD2-6*01|Mus_musculus_C57BL/6J
Alternative nameswatson_et_al:MSM_MsJ_IGHD2-5*01|IGHD2-6*01
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityF
Inference TypeRearranged
Mapped
Paralogs
Paralog Rep

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

No Items

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

d_rs_3_prime_start
d_rs_3_prime_end
d_rs_5_prime_start
d_rs_5_prime_end
D_3_HEPTAMER
D_3_NONAMER
D_5_HEPTAMER
D_5_NONAMER

Additional Information

Sequence IDA02205
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2022-05-15
Release Notes

First release

LocusIGH
Sequence TypeD
Gene Subgroup
Gene Designation
Allele Designation

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Imported to OGRDB with the following notes:
watson_et_al: MSM_MsJ_IGHD2-5*01|IGHD2-6*01

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2022-05-15 15:54:36
Version 1 published

First release

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeGene startGene endUTR 5' StartUTR 5' EndL-PART1 StartL-PART1 EndL-PART2 StartL-PART2 EndCDR1 StartCDR1 EndCDR2 StartCDR2 EndCDR3 Startv_rs_startv_rs_endd_rs_3_prime_startd_rs_3_prime_endd_rs_5_prime_startd_rs_5_prime_endj_rs_startj_rs_endCodon FrameVersionDate
IGHD-2ZLCIGHD2-5*01|Mus_musculus_CB.20,IGHD2-6*01|Mus_musculus_C57BL/6Jwatson_et_al:MSM_MsJ_IGHD2-5*01|IGHD2-6*01Rearranged1MSM/MsJstrain11712022-05-15