Sequence IGHJ-O6GC
Details
| Species | Mouse |
| Species subgroup | CAST/EiJ |
| Subgroup type | strain |
| Sequence Name | IGHJ-O6GC |
| IUIS Name | |
| Alternative names | watson_et_al:CAST_EiJ_IGHJ2_var |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | F |
| Inference Type | Rearranged |
| Mapped | |
| Paralogs | |
| Paralog Rep |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
No Items
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
Non-Core Regions
| j_rs_start | |
| j_rs_end | |
| J_HEPTAMER | |
| J_NONAMER |
Additional Information
| Sequence ID | A02104 |
| Curator | William Lees |
| Curator address | Birkbeck College, University of London, Malet Street, London |
| Version | 1 |
| Release Date | 2022-05-14 |
| Release Notes | First release |
| Locus | IGH |
| Sequence Type | J |
| Gene Subgroup | |
| Gene Designation | |
| Allele Designation | |
| Codon Frame | 3 |
| J CDR3 End | 15 |
Notes
Notes are added by IARC reviewers.
| Imported to OGRDB with the following notes: |
Attachments
No Items
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2022-05-14 14:31:11 | Version 1 published First release |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Alternative names | Inference Type | Affirmation Level | Species subgroup | Subgroup type | Gene start | Gene end | UTR 5' Start | UTR 5' End | L-PART1 Start | L-PART1 End | L-PART2 Start | L-PART2 End | CDR1 Start | CDR1 End | CDR2 Start | CDR2 End | CDR3 Start | v_rs_start | v_rs_end | d_rs_3_prime_start | d_rs_3_prime_end | d_rs_5_prime_start | d_rs_5_prime_end | j_rs_start | j_rs_end | Codon Frame | Version | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IGHJ-O6GC | watson_et_al:CAST_EiJ_IGHJ2_var | Rearranged | 1 | CAST/EiJ | strain | 1 | 48 | 3 | 1 | 2022-05-14 |