Details

SpeciesMus musculus
Species subgroupCAST/EiJ
Subgroup typestrain
Sequence NameIGHV-BVKM
IUIS Name
Alternative nameswatson_et_al:CAST_EiJ_IGHV5-8
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityF
Inference TypeRearranged Only
Mapped
Paralogs
Paralog Rep

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

No Items

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

CDR delineation

CDR1 Start76
CDR1 End99
CDR2 Start151
CDR2 End174
CDR3 Start289

Non-Core Regions

Exon 1 Start
Exon 1 End
Exon 2 Start
Exon 2 End
Exon 3 Start
Exon 3 End
Exon 4 Start
Exon 4 End
Exon 5 Start
Exon 5 End
Exon 6 Start
Exon 6 End
Exon 7 Start
Exon 7 End
Exon 8 Start
Exon 8 End
Exon 9 Start
Exon 9 End
UTR 3' Start
UTR 3' End

Additional Information

Sequence IDA02076
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2022-05-14
Release Notes

First release

LocusIGH
Sequence TypeV
Gene Subgroup
Gene Designation
Allele Designation
Gene start1
Gene end293

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Imported to OGRDB with the following notes:
watson_et_al: CAST_EiJ_IGHV5-8

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2022-05-14 14:31:08
Version 1 published

First release

Versions

All published versions of this sequence.

Sequence NameIMGT NameVersionDate
IGHV-BVKM12022-05-14