Sequence IGKV-HVPK
Details
| Species | Mus musculus |
| Species subgroup | DBA/1J |
| Subgroup type | strain |
| Sequence Name | IGKV-HVPK |
| IUIS Name | Musmus IGKV9-129*01 ORF |
| Alternative names | Kos et al: IGKV9-129*01_DBA1 |
| Affirmation Level | 1 |
| Full Sequence | |
| Coding Sequence | |
| Functionality | ORF |
| Inference Type | Rearranged |
| Mapped | |
| Paralogs | |
| Paralog Rep |
Un-rearranged Observations
Un-rearranged sequence observations that support this sequence:
Observations in AIRR-seq Repertoires
Click here to review supporting data in VDJbase.
Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.
CDR delineation
| CDR1 Start | 79 |
| CDR1 End | 96 |
| CDR2 Start | 148 |
| CDR2 End | 156 |
| CDR3 Start | 265 |
Non-Core Regions
| UTR 5' Start | |
| UTR 5' End | |
| L-PART1 Start | |
| L-PART1 End | |
| L_PART1 | |
| L-PART2 Start | |
| L-PART2 End | |
| L_PART2 | |
| v_rs_start | |
| v_rs_end | |
| V_HEPTAMER | |
| V_NONAMER |
Extension
| 3' Extension | |
| 3' start | |
| 3' end | |
| 5' start | |
| 5' end |
Additional Information
| Sequence ID | A01489 |
| Curator | William Lees |
| Curator address | Birkbeck College, University of London, Malet Street, London |
| Version | 1 |
| Release Date | 2022-05-03 |
| Release Notes | This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1 |
| Locus | IGK |
| Sequence Type | V |
| Gene Subgroup | |
| Gene Designation | |
| Allele Designation | |
| Gene start | 1 |
| Gene end | 287 |
Notes
Notes are added by IARC reviewers.
| Imported to OGRDB with the following notes: |
Attachments
History
History logs the times and reasons for the publication of each version of this sequence.
| William Lees 2022-05-03 11:20:36 | Version 1 published This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1 |
Versions
All published versions of this sequence.
| Sequence Name | IMGT Name | Version | Date |
|---|---|---|---|
| IGKV-HVPK | Musmus IGKV9-129*01 ORF | 1 | 2022-05-03 |