Details

SpeciesMouse
Species subgroupDBA/2J
Subgroup typestrain
Sequence NameIGKV-E76R
IUIS NameMusmus IGKV4-52*01 ORF, or Musmus IGKV4-54*01 ORF
Alternative namesKos et al: IGKV4-52*01_S5019_DBA2
Affirmation Level1
Full Sequence
Coding Sequence
FunctionalityORF
Inference TypeRearranged
Mapped
Paralogs
Paralog Rep

Un-rearranged Observations

Un-rearranged sequence observations that support this sequence:

No Items

Observations in AIRR-seq Repertoires

Click here to review supporting data in VDJbase.

Clicking the link will take you to VDJbase. Open in a new tab if you want to keep this page open. In VDJbase, click on the count in the Apperances column to see a list of samples in which the sequence was found.

Non-Core Regions

UTR 5' Start
UTR 5' End
L-PART1 Start
L-PART1 End
L_PART1
L-PART2 Start
L-PART2 End
L_PART2
v_rs_start
v_rs_end
V_HEPTAMER
V_NONAMER

Extension

3' Extension
3' start
3' end
5' start
5' end

Additional Information

Sequence IDA01394
CuratorWilliam Lees
Curator addressBirkbeck College, University of London, Malet Street, London
Version1
Release Date2022-05-03
Release Notes

This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1

LocusIGK
Sequence TypeV
Gene Subgroup
Gene Designation
Allele Designation

Acknowledgements

Individuals acknowledged as contributing to this sequence:

No Items

Notes

Notes are added by IARC reviewers.

Imported to OGRDB with the following notes:
Conserved Trp not found

Attachments

No Items

History

History logs the times and reasons for the publication of each version of this sequence.

William Lees
2022-05-03 11:21:03
Version 1 published

This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1

Versions

All published versions of this sequence.

Sequence NameIMGT NameAlternative namesInference TypeAffirmation LevelSpecies subgroupSubgroup typeVersionDate
IGKV-E76RMusmus IGKV4-52*01 ORF, or Musmus IGKV4-54*01 ORFKos et al: IGKV4-52*01_S5019_DBA2Rearranged1DBA/2Jstrain12022-05-03