{ "GermlineSet": [ { "germline_set_id": "OGRDB:G00089", "author": "Pierre Boudinot (1), Susana Magadan (2)", "lab_name": "(1) VIM, UMR 0892 (2) Immunology Laboratory CINBIO", "lab_address": "(1) INRAE, Universit\u00e9 Paris-Saclay, UVSQ, VIM, Jouy-en-Josas, France. (2) Research Center for Nanomaterials and Biomedicine (CINBIO), Universidade de Vigo, Vigo, Spain.", "acknowledgements": null, "release_version": 1, "release_description": null, "release_date": "2026-06-20", "germline_set_name": "IGH_VDJ", "germline_set_ref": "OGRDB:IGH_VDJ.1", "pub_ids": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "locus": "IGH", "allele_descriptions": [ { "allele_description_id": "OGRDB:A04153", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD1*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD1*02", "sequence": "GGTTTTTGTATGGGTGTGTGTCATCGTGATAACAACGGGGGCACAGTGTTACAAACCATAACAAAAACC", "coding_sequence": "ATAACAACGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2958", "sequence": "GGTTTTTGTATGGGTGTGTGTCATCGTGATAACAACGGGGGCACAGTGTTACAAACCATAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52049106, "gff_end": 52049174, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD1D*02" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04166", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD1D*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD1D*02", "sequence": "GGTTTTTGTATGGGTGTGTGTCATCGTGATAACAACGGGGGCACAGTGTTACAAACCATAACAAAAACC", "coding_sequence": "ATAACAACGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": "Genomic only", "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2971", "sequence": "GGTTTTTGTATGGGTGTGTGTCATCGTGATAACAACGGGGGCACAGTGTTACAAACCATAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84769548, "gff_end": 84769616, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD1*02" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A04147", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD1T1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD1T1*01", "sequence": "GGTTTTTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACGCCGTACAAAAACC", "coding_sequence": "ACTATATGGGGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2952", "sequence": "GGTTTTTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACGCCGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51935981, "gff_end": 51936049, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD1T3D*01", "IGHD3T2*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04150", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD1T2*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD1T2*02", "sequence": "GGTTTTTGTTATGGTGTTTTTCACAGTGACTATACAGTTACAGTTTGGGCTTCTTATTTGAGAGCCACAGTGATATTACATCGTACAAAAACC", "coding_sequence": "ACTATACAGTTACAGTTTGGGCTTCTTATTTGAGAGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T2", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 65, "d_rs_3_prime_start": 66, "d_rs_3_prime_end": 93, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2955", "sequence": "GGTTTTTGTTATGGTGTTTTTCACAGTGACTATACAGTTACAGTTTGGGCTTCTTATTTGAGAGCCACAGTGATATTACATCGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51987468, "gff_end": 51987560, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04162", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD1T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD1T3D*01", "sequence": "GGTTTTTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACACCGTACAAAAACC", "coding_sequence": "ACTATATGGGGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2967", "sequence": "GGTTTTTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACACCGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84681076, "gff_end": 84681144, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD1T1*01", "IGHD3T2*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04154", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2*01", "sequence": "GGTTTTTGTACAGGGTTAAACCACTGTGCCATATAGCGGGGTCACAATGATACAGTCCATGACAAAAACC", "coding_sequence": "CCATATAGCGGGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 42, "d_rs_3_prime_start": 43, "d_rs_3_prime_end": 70, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2959", "sequence": "GGTTTTTGTACAGGGTTAAACCACTGTGCCATATAGCGGGGTCACAATGATACAGTCCATGACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52049557, "gff_end": 52049626, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04167", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2D*01", "sequence": "GGTTTTTGTACAGGGTTAAACCACTGTGTCATATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "coding_sequence": "TCATATAGCGGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2972", "sequence": "GGTTTTTGTACAGGGTTAAACCACTGTGTCATATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84770003, "gff_end": 84770071, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04148", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2T1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2T1*01", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGCTGGGGGGCACTGTGAAATGAGGCTGTACAAAAACC", "coding_sequence": "ATATGGGCTGGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 43, "d_rs_3_prime_start": 44, "d_rs_3_prime_end": 71, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2953", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGCTGGGGGGCACTGTGAAATGAGGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51936252, "gff_end": 51936322, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04159", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2T1D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2T1D*01", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "coding_sequence": "ATATGGGGTGGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 43, "d_rs_3_prime_start": 44, "d_rs_3_prime_end": 71, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2964", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84581625, "gff_end": 84581695, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04152", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2T2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2T2*01", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGGTGCACAGTGAAATGAGACTGTACAAAAACC", "coding_sequence": "ATATGGGGTGGGGTG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 43, "d_rs_3_prime_start": 44, "d_rs_3_prime_end": 71, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2957", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGGTGCACAGTGAAATGAGACTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51988520, "gff_end": 51988590, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04163", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2T3D*01", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGCTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "coding_sequence": "ATATGGGGTGGGCTGGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 48, "d_rs_3_prime_start": 49, "d_rs_3_prime_end": 76, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2968", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATATGGGGTGGGCTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84681490, "gff_end": 84681565, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04155", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3*01", "sequence": "GGTTTTTGTAATGGTGTGATTCACTGTGTATGGGAGTGGCCACAGTGATAAACATCAATACAAAAACC", "coding_sequence": "TATGGGAGTGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2960", "sequence": "GGTTTTTGTAATGGTGTGATTCACTGTGTATGGGAGTGGCCACAGTGATAAACATCAATACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52049999, "gff_end": 52050066, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04168", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3D*01", "sequence": "GGTTTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "coding_sequence": "TACGGGAATGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2973", "sequence": "GGTTTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84770433, "gff_end": 84770500, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD4T1D*01", "IGHD4T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04149", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3T1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3T1*01", "sequence": "GGGGTTTGTATAGGGTTAAACCACTGTGCCATATAGCAGGTCACAATGATACAGTCCATGACAAAAACC", "coding_sequence": "CCATATAGCAGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3T1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2954", "sequence": "GGGGTTTGTATAGGGTTAAACCACTGTGCCATATAGCAGGTCACAATGATACAGTCCATGACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51943141, "gff_end": 51943209, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04160", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3T1D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3T1D*01", "sequence": "GGGAGTTGTACAGGGTTAAACCACTGTGCCACATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "coding_sequence": "CCACATAGCGGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3T1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2965", "sequence": "GGGAGTTGTACAGGGTTAAACCACTGTGCCACATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84588366, "gff_end": 84588434, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD3T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04151", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3T2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3T2*01", "sequence": "GGTTTCTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACATCGTAAAAAAAAA", "coding_sequence": "ACTATATGGGGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3T2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2956", "sequence": "GGTTTCTGTTATGGTGTGTATCACTGTGACTATATGGGGGCCACAGTGATATTACATCGTAAAAAAAAA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51988245, "gff_end": 51988313, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD1T1*01", "IGHD1T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04164", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD3T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD3T3D*01", "sequence": "GGGAGTTGTACAGGGTTAAACCACTGTGCCACATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "coding_sequence": "CCACATAGCGGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3T3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 41, "d_rs_3_prime_start": 42, "d_rs_3_prime_end": 69, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2969", "sequence": "GGGAGTTGTACAGGGTTAAACCACTGTGCCACATAGCGGGTCACAATGATACAGTCCATGACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84688211, "gff_end": 84688279, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD3T1D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04156", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD4*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD4*01", "sequence": "GGTTTTTGTACAGGGATGTATCACAGTGCAGAATAACGGCCACAGTGATATAGCCCATGACAAAAACT", "coding_sequence": "CAGAATAACGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2961", "sequence": "GGTTTTTGTACAGGGATGTATCACAGTGCAGAATAACGGCCACAGTGATATAGCCCATGACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52050786, "gff_end": 52050853, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD4D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04169", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD4D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD4D*01", "sequence": "GGTTTTTGTACAGGGATGTATCACAGTGCAGAATAACGGCCACAGTGATATAGCCCATGACAAAAACT", "coding_sequence": "CAGAATAACGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2974", "sequence": "GGTTTTTGTACAGGGATGTATCACAGTGCAGAATAACGGCCACAGTGATATAGCCCATGACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84771220, "gff_end": 84771287, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD4*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04161", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD4T1D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD4T1D*01", "sequence": "GGGCTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "coding_sequence": "TACGGGAATGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4T1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2966", "sequence": "GGGCTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84589003, "gff_end": 84589070, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD3D*01", "IGHD4T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04165", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD4T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD4T3D*01", "sequence": "GGGCTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "coding_sequence": "TACGGGAATGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4T3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2970", "sequence": "GGGCTTTGTAATGGTGTGAGTCACTGTGTACGGGAATGGCCACAGTGATAAACATCAATACTAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84688848, "gff_end": 84688915, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD3D*01", "IGHD4T1D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04157", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD5*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD5*01", "sequence": "AGATTTTGTACTGGCATGTATCACTGTGTACACTGGGAGCCACAATGATATACACCAGTACAAAAACC", "coding_sequence": "TACACTGGGAGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "5", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2962", "sequence": "AGATTTTGTACTGGCATGTATCACTGTGTACACTGGGAGCCACAATGATATACACCAGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52051228, "gff_end": 52051295, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD5D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04170", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD5D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD5D*01", "sequence": "AGATTTTGTACTGGCATGTATCACTGTGTACACTGGGAGCCACAATGATATACACCAGTACAAAAACG", "coding_sequence": "TACACTGGGAGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "5D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2975", "sequence": "AGATTTTGTACTGGCATGTATCACTGTGTACACTGGGAGCCACAATGATATACACCAGTACAAAAACG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84771664, "gff_end": 84771731, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD5*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04158", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD6*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD6*01", "sequence": "GGTTTTTGTAATGATGTGAGTCACTGTGTATGGGGGCAGCCACAGTGATACACACCACTACGAAAACC", "coding_sequence": "TATGGGGGCAGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "6", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2963", "sequence": "GGTTTTTGTAATGATGTGAGTCACTGTGTATGGGGGCAGCCACAGTGATACACACCACTACGAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52051683, "gff_end": 52051750, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD6D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04171", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD6D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD6D*01", "sequence": "GGTTTTTGTAATGGTGTGTGCCACTGTGTATGGGGGCAGCCACAGTGATACACACCACTACGAAAACC", "coding_sequence": "TATGGGGGCAGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "6D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 29, "gene_end": 40, "d_rs_3_prime_start": 41, "d_rs_3_prime_end": 68, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 28, "unrearranged_support": [ { "sequence_id": "2976", "sequence": "GGTTTTTGTAATGGTGTGTGCCACTGTGTATGGGGGCAGCCACAGTGATACACACCACTACGAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84772120, "gff_end": 84772187, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHD6*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04176", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ1*01", "sequence": "GGTTTTTAGTTTAGGGGCAGATAAACAATTATCACTGTGATTACTATTTCGACTACTGGGGGAAAGGGACCCAAGTCACGATAACTTCTG", "coding_sequence": "ATTACTATTTCGACTACTGGGGGAAAGGGACCCAAGTCACGATAACTTCTG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2981", "sequence": "GGTTTTTAGTTTAGGGGCAGATAAACAATTATCACTGTGATTACTATTTCGACTACTGGGGGAAAGGGACCCAAGTCACGATAACTTCTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52065854, "gff_end": 52065943, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04172", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ1T1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ1T1*01", "sequence": "GGTTTTTGTACAGTCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "coding_sequence": "ATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 87, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2977", "sequence": "GGTTTTTGTACAGTCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51936588, "gff_end": 51936674, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ1T1D*01", "IGHJ1T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04181", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ1T1D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ1T1D*01", "sequence": "GGTTTTTGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "coding_sequence": "ATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 87, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2986", "sequence": "GGTTTTTGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84582009, "gff_end": 84582095, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ1T1*01", "IGHJ1T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04174", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ1T2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ1T2*01", "sequence": "GGTTTTAGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAGCAG", "coding_sequence": "ATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAGCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 87, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2979", "sequence": "GGTTTTAGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAGCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51988903, "gff_end": 51988989, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04183", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ1T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ1T3D*01", "sequence": "GGTTTTTGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "coding_sequence": "ATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": "Genomic only", "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "1T3D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 87, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2988", "sequence": "GGTTTTTGTACAGGCAGTGAATGGAGACAGAGCACTGTGATGCTTTTGACTACTGGGGTAAAGGGACACAAGTCACCGTCTCAACAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84681880, "gff_end": 84681966, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ1T1*01", "IGHJ1T1D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A04177", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ2*01", "sequence": "CTGATTTTGTACGAAGTATTGGTCAGACCATTCACTGTGACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "coding_sequence": "ACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2982", "sequence": "CTGATTTTGTACGAAGTATTGGTCAGACCATTCACTGTGACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52066023, "gff_end": 52066112, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ4D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04173", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ2T1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ2T1*01", "sequence": "CTTTTTGTATTGCTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "coding_sequence": "TATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 91, "j_codon_frame": 1, "j_cdr3_end": 19, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2978", "sequence": "CTTTTTGTATTGCTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51937064, "gff_end": 51937154, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ2T1D*01", "IGHJ2T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04182", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ2T1D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ2T1D*01", "sequence": "GTTTTTGTATTGTTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "coding_sequence": "TATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 91, "j_codon_frame": 1, "j_cdr3_end": 19, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2987", "sequence": "GTTTTTGTATTGTTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84582517, "gff_end": 84582607, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ2T1*01", "IGHJ2T3D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04175", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ2T2*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ2T2*02", "sequence": "GTTTTTGTATTGCTTGGCATATGCCCTTCTCACACTGTGTATGGATACTTTGACTATTGGGGGAAAGGAACATTGATCACAGTATCATCAG", "coding_sequence": "TATGGATACTTTGACTATTGGGGGAAAGGAACATTGATCACAGTATCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T2", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 91, "j_codon_frame": 1, "j_cdr3_end": 19, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2980", "sequence": "GTTTTTGTATTGCTTGGCATATGCCCTTCTCACACTGTGTATGGATACTTTGACTATTGGGGGAAAGGAACATTGATCACAGTATCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51989416, "gff_end": 51989506, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04184", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ2T3D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ2T3D*01", "sequence": "GTTTTTGTATTGTTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "coding_sequence": "TATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T3D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 91, "j_codon_frame": 1, "j_cdr3_end": 19, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2989", "sequence": "GTTTTTGTATTGTTTGGCATATGCCCTTGTCACGCTGTGTATAGCTACTTTGACTATTGGGGGAAAGGAACAATGGTCACAGTCTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84682395, "gff_end": 84682485, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ2T1*01", "IGHJ2T1D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04178", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ3*01", "sequence": "AGTTTTTGTGCGTTGCACGTATTGAAAGATTGCACTGTGACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "coding_sequence": "ACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2983", "sequence": "AGTTTTTGTGCGTTGCACGTATTGAAAGATTGCACTGTGACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52066228, "gff_end": 52066317, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ5D*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04185", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ3D*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ3D*02", "sequence": "GGTTTTTAGTTTAGGGGCAGATAAACAATTATCACTGTGATTACTATTTCGACTACTGGGGGAAGGGGACCCAAGTCACGATAACTTCTG", "coding_sequence": "ATTACTATTTCGACTACTGGGGGAAGGGGACCCAAGTCACGATAACTTCTG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "3D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2990", "sequence": "GGTTTTTAGTTTAGGGGCAGATAAACAATTATCACTGTGATTACTATTTCGACTACTGGGGGAAGGGGACCCAAGTCACGATAACTTCTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84789439, "gff_end": 84789528, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04179", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ4*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ4*02", "sequence": "GGTTTTTGTGCATAGCCTGTATTGGTTATTTGCACTGTGACTACAGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "coding_sequence": "ACTACAGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2984", "sequence": "GGTTTTTGTGCATAGCCTGTATTGGTTATTTGCACTGTGACTACAGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52066563, "gff_end": 52066652, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04186", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ4D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ4D*01", "sequence": "CTGATTTTGTACGAAGTATTGGTCAGACCATTCACTGTGACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "coding_sequence": "ACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "4D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2991", "sequence": "CTGATTTTGTACGAAGTATTGGTCAGACCATTCACTGTGACAACTACTTTGACTACTGGGGGAAAGGGACCATGGTGACCGTGTCCACAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84789608, "gff_end": 84789697, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ2*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04180", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ5*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ5*02", "sequence": "TGCTTTTTATACCACTTGTCAAGGTAATTGAACACAGTGCTACGCTGCTTTTGACTCCTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "coding_sequence": "CTACGCTGCTTTTGACTCCTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "5", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 89, "j_codon_frame": 2, "j_cdr3_end": 20, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2985", "sequence": "TGCTTTTTATACCACTTGTCAAGGTAATTGAACACAGTGCTACGCTGCTTTTGACTCCTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52066948, "gff_end": 52067036, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04187", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ5D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ5D*01", "sequence": "AGTTTTTGTGCGTTGCACGTATTGAAAGATTGCACTGTGACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "coding_sequence": "ACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "5D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2992", "sequence": "AGTTTTTGTGCGTTGCACGTATTGAAAGATTGCACTGTGACAATGCTTTTGACTACTGGGGGAAAGGCACAATGGTTACCGTTTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84789813, "gff_end": 84789902, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGHJ3*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04188", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ6D*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ6D*02", "sequence": "GGTTTTTGTGCATAGCCTGTATTGGTTATTTGCACTGTGACTACCGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "coding_sequence": "ACTACCGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "6D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 90, "j_codon_frame": 3, "j_cdr3_end": 18, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2993", "sequence": "GGTTTTTGTGCATAGCCTGTATTGGTTATTTGCACTGTGACTACCGTTTTGACTACTGGGGGAAAGGGACAATGGTTACTGTTTCATCAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84790172, "gff_end": 84790261, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04189", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHJ7D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHJ7D*01", "sequence": "TGCTTTTTATACCACTTGTCAAGGTAATTGAACACAGTGCTACGCTGCTTTTGACTATTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "coding_sequence": "CTACGCTGCTTTTGACTATTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "7D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 89, "j_codon_frame": 2, "j_cdr3_end": 20, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "2994", "sequence": "TGCTTTTTATACCACTTGTCAAGGTAATTGAACACAGTGCTACGCTGCTTTTGACTATTGGGGTCAGGGTACAATAGTAACCGTTTCAG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84790560, "gff_end": 84790648, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04066", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-13*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-13*01", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTGGTTAAAAATCCTGGAGAATCCCACAAACTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTATGAGATGAACTGGATCAGACAGGCTCCTGGGAAAGGATTGGAGTGGATTGCCTATAGTTATAGTACTACTACATATTACTCCCAGTCAGTCCAAGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAACTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAAGCA", "coding_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTGGTTAAAAATCCTGGAGAATCCCACAAACTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTATGAGATGAACTGGATCAGACAGGCTCCTGGGAAAGGATTGGAGTGGATTGCCTATAGTTATAGTACTACTACATATTACTCCCAGTCAGTCCAAGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAACTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "13", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTGGTTAAAAATCCTGGAGAATCCCACAAACTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTATGAGATGAACTGGATCAGACAGGCTCCTGGGAAAGGATTGGAGTGGATTGCCTATAGTTATAGTACTACTACATATTACTCCCAGTCAGTCCAAGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAACTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "aligned_sequence": "GGTCAGACATTGACTGAG......TCTGGACCA...GTGGTTAAAAATCCTGGAGAATCCCACAAACTG...ACCTGTACAGGTTCTGGGTTCACATTC............AGTAGCTATGAGATGAACTGGATCAGACAGGCTCCTGGGAAAGGATTGGAGTGGATTGCCTATAGTTATAGT............ACTACTACATATTACTCCCAGTCAGTCCAA...GGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAACTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2880", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTGGTTAAAAATCCTGGAGAATCCCACAAACTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTATGAGATGAACTGGATCAGACAGGCTCCTGGGAAAGGATTGGAGTGGATTGCCTATAGTTATAGTACTACTACATATTACTCCCAGTCAGTCCAAGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAACTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAAGCA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51951807, "gff_end": 51952137, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04067", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-18*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-18*02", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGGGATTAAAACGCCTGGAGAATCCAACACACTGAGTTGTACCACCTCTGGGTTCACATTCAGTAGCTACCATATGGCATGGATGAAACAGGCTCCTGGGAAAGGACTTGAGTTTGTTGCCTTTATACACACTGGTGGATCGAGTCCATTCTATTCTCAGTCAATACAGGGTAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCATTGTATTACTGTGCCCGGTACACACAGTGAGAGAGAGTGGTGAGAGAGCTGTACAAAAACC", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGGGATTAAAACGCCTGGAGAATCCAACACACTGAGTTGTACCACCTCTGGGTTCACATTCAGTAGCTACCATATGGCATGGATGAAACAGGCTCCTGGGAAAGGACTTGAGTTTGTTGCCTTTATACACACTGGTGGATCGAGTCCATTCTATTCTCAGTCAATACAGGGTAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCATTGTATTACTGTGCCCGGTACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "18", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGGGATTAAAACGCCTGGAGAATCCAACACACTGAGTTGTACCACCTCTGGGTTCACATTCAGTAGCTACCATATGGCATGGATGAAACAGGCTCCTGGGAAAGGACTTGAGTTTGTTGCCTTTATACACACTGGTGGATCGAGTCCATTCTATTCTCAGTCAATACAGGGTAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCATTGTATTACTGTGCCCGGTACA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GGGATTAAAACGCCTGGAGAATCCAACACACTG...AGTTGTACCACCTCTGGGTTCACATTC............AGTAGCTACCATATGGCATGGATGAAACAGGCTCCTGGGAAAGGACTTGAGTTTGTTGCCTTTATACACACTGGT......GGATCGAGTCCATTCTATTCTCAGTCAATACAG...GGTAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCATTGTATTACTGTGCCCGGTACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2881", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGGGATTAAAACGCCTGGAGAATCCAACACACTGAGTTGTACCACCTCTGGGTTCACATTCAGTAGCTACCATATGGCATGGATGAAACAGGCTCCTGGGAAAGGACTTGAGTTTGTTGCCTTTATACACACTGGTGGATCGAGTCCATTCTATTCTCAGTCAATACAGGGTAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCATTGTATTACTGTGCCCGGTACACACAGTGAGAGAGAGTGGTGAGAGAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51907821, "gff_end": 51908157, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04081", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-2*03.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-2*03", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAATTAAAACGCCTGGAGAATCCCACACACTGATCTGTACAGGTTCTGGGTTCACGTTCAAGAACTATTGGATGAGTTGGATAAGACAGGCTCCTGGGAAAGAACTGGAATGGATTGGTTATATACATGGTACTACTACTTACTACTCCCAGTCAATGCAGGGTAGATTCACCCTCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCCCGGTACACACAGTGAGAGAGAGTGGTAGGGGAGTCCCGCAAAAACC", "coding_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAATTAAAACGCCTGGAGAATCCCACACACTGATCTGTACAGGTTCTGGGTTCACGTTCAAGAACTATTGGATGAGTTGGATAAGACAGGCTCCTGGGAAAGAACTGGAATGGATTGGTTATATACATGGTACTACTACTTACTACTCCCAGTCAATGCAGGGTAGATTCACCCTCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCCCGGTACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "2", "subgroup_designation": "1", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAATTAAAACGCCTGGAGAATCCCACACACTGATCTGTACAGGTTCTGGGTTCACGTTCAAGAACTATTGGATGAGTTGGATAAGACAGGCTCCTGGGAAAGAACTGGAATGGATTGGTTATATACATGGTACTACTACTTACTACTCCCAGTCAATGCAGGGTAGATTCACCCTCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCCCGGTACA", "aligned_sequence": "GGTCAGACATTGACTGAG......TCTGGACCA...GTAATTAAAACGCCTGGAGAATCCCACACACTG...ATCTGTACAGGTTCTGGGTTCACGTTC............AAGAACTATTGGATGAGTTGGATAAGACAGGCTCCTGGGAAAGAACTGGAATGGATTGGTTATATACATGGT............ACTACTACTTACTACTCCCAGTCAATGCAG...GGTAGATTCACCCTCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCCCGGTACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2894", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAATTAAAACGCCTGGAGAATCCCACACACTGATCTGTACAGGTTCTGGGTTCACGTTCAAGAACTATTGGATGAGTTGGATAAGACAGGCTCCTGGGAAAGAACTGGAATGGATTGGTTATATACATGGTACTACTACTTACTACTCCCAGTCAATGCAGGGTAGATTCACCCTCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCCCGGTACACACAGTGAGAGAGAGTGGTAGGGGAGTCCCGCAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52035268, "gff_end": 52035598, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04068", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-21*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-21*02", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTTGTAAAAATAACTGGAGAACCACACAAAGTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTACTGGATGGCTTGGATCAGACAGGTTCCTGGGAAAGGACTTGAATGGATTGCCATTATAAAATATGATAGTGCTGAAATCTACTACTCCCAGTCAGTCCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAAACACAGTGACACAGGAGGCTGCAGCGCTGTATAAAAACTG", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTTGTAAAAATAACTGGAGAACCACACAAAGTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTACTGGATGGCTTGGATCAGACAGGTTCCTGGGAAAGGACTTGAATGGATTGCCATTATAAAATATGATAGTGCTGAAATCTACTACTCCCAGTCAGTCCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAAA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "21", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTTGTAAAAATAACTGGAGAACCACACAAAGTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTACTGGATGGCTTGGATCAGACAGGTTCCTGGGAAAGGACTTGAATGGATTGCCATTATAAAATATGATAGTGCTGAAATCTACTACTCCCAGTCAGTCCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAAA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTTGTAAAAATAACTGGAGAACCACACAAAGTG...ACCTGTACAGGTTCTGGGTTCACATTC............AGTAGCTACTGGATGGCTTGGATCAGACAGGTTCCTGGGAAAGGACTTGAATGGATTGCCATTATAAAATATGAT......AGTGCTGAAATCTACTACTCCCAGTCAGTCCAG...GGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2882", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTTGTAAAAATAACTGGAGAACCACACAAAGTGACCTGTACAGGTTCTGGGTTCACATTCAGTAGCTACTGGATGGCTTGGATCAGACAGGTTCCTGGGAAAGGACTTGAATGGATTGCCATTATAAAATATGATAGTGCTGAAATCTACTACTCCCAGTCAGTCCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAAACACAGTGACACAGGAGGCTGCAGCGCTGTATAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51869490, "gff_end": 51869824, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04083", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-28-2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-28-2*01", "sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTAATCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAACAC", "coding_sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTAATCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "28-2", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTAATCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "aligned_sequence": "AGTCAGATATTGACTGAG......TCTGGACCA...GTAGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAGCATCTGGGTTCACATTC............AGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAG......AGTAATCCAATCTCTTAATCCCAGTCAGTCCAG...GGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2896", "sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTAATCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAACAC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51839561, "gff_end": 51839897, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04069", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-36*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-36*01", "sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACCTCTGGGTTCACATTCAGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTCTAGTTATAGTACTGCTACATATTATTCCCAGTCAGTCCAGGGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTTAAATTAAGTGAGAAGCGGCACAAAAACCA", "coding_sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACCTCTGGGTTCACATTCAGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTCTAGTTATAGTACTGCTACATATTATTCCCAGTCAGTCCAGGGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "36", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACCTCTGGGTTCACATTCAGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTCTAGTTATAGTACTGCTACATATTATTCCCAGTCAGTCCAGGGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "aligned_sequence": "AGTCAGATATTGACTGAG......TCTGGACCA...GTAGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAACCTCTGGGTTCACATTC............AGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTCTAGTTATAGT............ACTGCTACATATTATTCCCAGTCAGTCCAG...GGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2883", "sequence": "AGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACCTCTGGGTTCACATTCAGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTCTAGTTATAGTACTGCTACATATTATTCCCAGTCAGTCCAGGGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTTAAATTAAGTGAGAAGCGGCACAAAAACCA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51733851, "gff_end": 51734181, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04071", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-39*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-39*02", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACCCAGCAGTATATTACTGTGCCCGGTACACACAGTGAGAGATAGTGGTGAGAGAGCTGTACAAAAATC", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACCCAGCAGTATATTACTGTGCCCGGTACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "39", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACCCAGCAGTATATTACTGTGCCCGGTACA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTGGTTAAACATCCTGGAGAATCACACAAACTG...ACCTGTACAGGCTCTGGGTTCACATTC............AGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGT............ACTACTGCTGACTACTCCCAGTCATTTCAG...GGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACCCAGCAGTATATTACTGTGCCCGGTACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2885", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACCCAGCAGTATATTACTGTGCCCGGTACACACAGTGAGAGATAGTGGTGAGAGAGCTGTACAAAAATC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51717941, "gff_end": 51718271, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04070", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-39-5*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-39-5*01", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACACACAGTGAGAGATAGTGGTGAGAGAGCTGTACAAAAACC", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "39-5", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTGGTTAAACATCCTGGAGAATCACACAAACTG...ACCTGTACAGGCTCTGGGTTCACATTC............AGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGT............ACTACTGCTGACTACTCCCAGTCATTTCAG...GGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2884", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACACACAGTGAGAGATAGTGGTGAGAGAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51698219, "gff_end": 51698549, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04084", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-41*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-41*02", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTAGATCAGACAGGCTCCTTGGAAAGGACTGGGGTGGGTTGCTTATATAGGCACATCTAGTAGTCCAATCTCTTCCTCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACTGACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAAACTAATGGGAGAAGCTGTACAAAAAAC", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTAGATCAGACAGGCTCCTTGGAAAGGACTGGGGTGGGTTGCTTATATAGGCACATCTAGTAGTCCAATCTCTTCCTCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACTGACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "41", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTAGATCAGACAGGCTCCTTGGAAAGGACTGGGGTGGGTTGCTTATATAGGCACATCTAGTAGTCCAATCTCTTCCTCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACTGACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTAGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAGCATCTGGGTTCACATTC............AGTAGCTATAGGATGGGTTAGATCAGACAGGCTCCTTGGAAAGGACTGGGGTGGGTTGCTTATATAGGCACATCT......AGTAGTCCAATCTCTTCCTCCCAGTCAGTCCAG...GGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACTGACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2897", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTAGATCAGACAGGCTCCTTGGAAAGGACTGGGGTGGGTTGCTTATATAGGCACATCTAGTAGTCCAATCTCTTCCTCCCAGTCAGTCCAGGGTAGATTCACTATCTCCAGAGATGACTCCAGCAGTAAGCTGTACTGACAGATGAACAGTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTAAAACTAATGGGAGAAGCTGTACAAAAAAC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51691487, "gff_end": 51691823, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04072", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-42*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-42*02", "sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCCTGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACAATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTTCAGCTATTACCAGCAGTGATGGTGGTAGCACTTACTACTCCCAGTCTGTTCAGGGTCAGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCGCTGTACAAAAACTT", "coding_sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCCTGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACAATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTTCAGCTATTACCAGCAGTGATGGTGGTAGCACTTACTACTCCCAGTCTGTTCAGGGTCAGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "42", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCCTGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACAATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTTCAGCTATTACCAGCAGTGATGGTGGTAGCACTTACTACTCCCAGTCTGTTCAGGGTCAGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACACTGACGGAG......TCTGAATCA...GTGGTTAAAAAGCCTGGAGAATCCCACAAACTG...ACCTGTACATATTCTGGGTTTGGTGGC...............AACAATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTTCAGCTATTACCAGCAGTGAT...GGTGGTAGCACTTACTACTCCCAGTCTGTTCAG...GGTCAGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2886", "sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCCTGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACAATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTTCAGCTATTACCAGCAGTGATGGTGGTAGCACTTACTACTCCCAGTCTGTTCAGGGTCAGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCGCTGTACAAAAACTT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51678364, "gff_end": 51678698, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04073", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1-47-4*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1-47-4*01", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTATTCCCAGTCAGTCCAGGGTAGATTCACCATCTCCAGAGATGACGCCAGCAGTAAGATGTATCTACAGATGAACAGCCTGAAGAGTGAGGACTCTGCAGTGTATTATTGTGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAACCA", "coding_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTATTCCCAGTCAGTCCAGGGTAGATTCACCATCTCCAGAGATGACGCCAGCAGTAAGATGTATCTACAGATGAACAGCCTGAAGAGTGAGGACTCTGCAGTGTATTATTGTGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "47-4", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 291, "v_rs_end": 329, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTATTCCCAGTCAGTCCAGGGTAGATTCACCATCTCCAGAGATGACGCCAGCAGTAAGATGTATCTACAGATGAACAGCCTGAAGAGTGAGGACTCTGCAGTGTATTATTGTGT", "aligned_sequence": "GGTCAGACATTGACTGAG......TCTGGACCA...GTAGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAGCATCTGGGTTCACATTC............AGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAG......AGTAATCCAATCTCTTATTCCCAGTCAGTCCAG...GGTAGATTCACCATCTCCAGAGATGACGCCAGCAGTAAGATGTATCTACAGATGAACAGCCTGAAGAGTGAGGACTCTGCAGTGTATTATTGTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2887", "sequence": "GGTCAGACATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCATCTGGGTTCACATTCAGTAGCTATAGGATGGGTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATATTAGCACACAGAGTAATCCAATCTCTTATTCCCAGTCAGTCCAGGGTAGATTCACCATCTCCAGAGATGACGCCAGCAGTAAGATGTATCTACAGATGAACAGCCTGAAGAGTGAGGACTCTGCAGTGTATTATTGTGTCACAGTGGTAAACTAATGGGAGAAGCCGTACAAAAACCA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51629745, "gff_end": 51630073, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04125", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV10-47*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV10-47*02", "sequence": "GATATCACATTAACCCAACCTGGTTCTATGGTTGTAAGTCCAGGAGAGTCTGTCACCATCCCCTGTAAGGTTGCTGGTTATTCTGTTACTAGCACTTGCACCAACTGGATTCGCCATTCTGAAGGAAAAGCTATGGAGTGGATTGGATACCTGTGTAGTAGTAGTAGCAGTGGCACAACAGACTCATTAAAGAGCAAAATCAGCTTCACTGTTGACTCCTCCAGCAGCACAGTGTTTCTACAAGGGAAGAATTTCCAGACTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCCCACAGTGATACAAACCACCGCCAGAGCTGTGCAAAAACC", "coding_sequence": "GATATCACATTAACCCAACCTGGTTCTATGGTTGTAAGTCCAGGAGAGTCTGTCACCATCCCCTGTAAGGTTGCTGGTTATTCTGTTACTAGCACTTGCACCAACTGGATTCGCCATTCTGAAGGAAAAGCTATGGAGTGGATTGGATACCTGTGTAGTAGTAGTAGCAGTGGCACAACAGACTCATTAAAGAGCAAAATCAGCTTCACTGTTGACTCCTCCAGCAGCACAGTGTTTCTACAAGGGAAGAATTTCCAGACTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "47", "subgroup_designation": "10", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 298, "v_rs_end": 336, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCACATTAACCCAACCTGGTTCTATGGTTGTAAGTCCAGGAGAGTCTGTCACCATCCCCTGTAAGGTTGCTGGTTATTCTGTTACTAGCACTTGCACCAACTGGATTCGCCATTCTGAAGGAAAAGCTATGGAGTGGATTGGATACCTGTGTAGTAGTAGTAGCAGTGGCACAACAGACTCATTAAAGAGCAAAATCAGCTTCACTGTTGACTCCTCCAGCAGCACAGTGTTTCTACAAGGGAAGAATTTCCAGACTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCC", "aligned_sequence": "GATATCACATTAACCCAA......CCTGGTTCT...ATGGTTGTAAGTCCAGGAGAGTCTGTCACCATC...CCCTGTAAGGTTGCTGGTTATTCTGTT............ACTAGCACTTGCACCAACTGGATTCGCCATTCTGAAGGAAAAGCTATGGAGTGGATTGGATACCTGTGTAGTAGT.........AGTAGCAGTGGCACAACAGACTCATTAAAG...AGCAAAATCAGCTTCACTGTTGACTCCTCCAGCAGCACAGTGTTTCTACAAGGGAAGAATTTCCAGACTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2934", "sequence": "GATATCACATTAACCCAACCTGGTTCTATGGTTGTAAGTCCAGGAGAGTCTGTCACCATCCCCTGTAAGGTTGCTGGTTATTCTGTTACTAGCACTTGCACCAACTGGATTCGCCATTCTGAAGGAAAAGCTATGGAGTGGATTGGATACCTGTGTAGTAGTAGTAGCAGTGGCACAACAGACTCATTAAAGAGCAAAATCAGCTTCACTGTTGACTCCTCCAGCAGCACAGTGTTTCTACAAGGGAAGAATTTCCAGACTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCCCACAGTGATACAAACCACCGCCAGAGCTGTGCAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51649050, "gff_end": 51649385, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04126", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV10D-26*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV10D-26*01", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTATTGTCTTGGATGGATACGACAAGCTGAAGGGAAAGCTTTGGAGCATGTTGGTGTTACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGAGGACACAGTGATACAAACCAGCACCAGAGCTTTACAAAAACT", "coding_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTATTGTCTTGGATGGATACGACAAGCTGAAGGGAAAGCTTTGGAGCATGTTGGTGTTACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGAGGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "26", "subgroup_designation": "10D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTATTGTCTTGGATGGATACGACAAGCTGAAGGGAAAGCTTTGGAGCATGTTGGTGTTACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGAGGA", "aligned_sequence": "GATATTGAACTCATCCAG......TCTGGTCCA...GTGGTTATAGAACCAGGAGTGTCTTTCAGCATC...TCCTGCAAATTCTCTGGGTTTTCTATA............TCTTCTTATTGTCTTGGATGGATACGACAAGCTGAAGGGAAAGCTTTGGAGCATGTTGGTGTTACATGCAGT............AGTAGTACTTACACTGTAGACTCACTAAAG...AGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGAGGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2935", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTATTGTCTTGGATGGATACGACAAGCTGAAGGGAAAGCTTTGGAGCATGTTGGTGTTACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGAGGACACAGTGATACAAACCAGCACCAGAGCTTTACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84518851, "gff_end": 84519181, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04127", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV10D-7*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV10D-7*02", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCTTCGCTGGATACGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGACACAGTGGCACAAACCATGACCAGGCTCTACAAAAACCC", "coding_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCTTCGCTGGATACGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "7", "subgroup_designation": "10D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCTTCGCTGGATACGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "aligned_sequence": "GATATTGAACTCATCCAG......TCTGGTCCA...GTGGTTATAGAACCAGGAGTGTCTTTCAGCATC...TCCTGCAAATTCTCTGGGTTTTCTATA............TCTTCTTACTGTCTTCGCTGGATACGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGCAGT............AGTAGTACTTACACTGTAGACTCACTAAAG...AGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2936", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCTTCGCTGGATACGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGTACTTACACTGTAGACTCACTAAAGAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGACACAGTGGCACAAACCATGACCAGGCTCTACAAAAACCC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84702794, "gff_end": 84703124, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04128", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV10D-9*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV10D-9*02", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCCTCACTGGATACGACAAGCTGAAGGGAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGAACTTCCACTGTAGACTCACTAAATAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGACACAGTGGCACAAACCATGACCAGGCTCTACAAAAACCC", "coding_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCCTCACTGGATACGACAAGCTGAAGGGAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGAACTTCCACTGTAGACTCACTAAATAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "9", "subgroup_designation": "10D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCCTCACTGGATACGACAAGCTGAAGGGAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGAACTTCCACTGTAGACTCACTAAATAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "aligned_sequence": "GATATTGAACTCATCCAG......TCTGGTCCA...GTGGTTATAGAACCAGGAGTGTCTTTCAGCATC...TCCTGCAAATTCTCTGGGTTTTCTATA............TCTTCTTACTGTCCTCACTGGATACGACAAGCTGAAGGGAAAGCTTTGGAGTATGTTGGTTATACATGCAGT............AGTAGAACTTCCACTGTAGACTCACTAAAT...AGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2937", "sequence": "GATATTGAACTCATCCAGTCTGGTCCAGTGGTTATAGAACCAGGAGTGTCTTTCAGCATCTCCTGCAAATTCTCTGGGTTTTCTATATCTTCTTACTGTCCTCACTGGATACGACAAGCTGAAGGGAAAGCTTTGGAGTATGTTGGTTATACATGCAGTAGTAGAACTTCCACTGTAGACTCACTAAATAGCAAGATCACTTCTAGATATGACAGTTCCAGCAGTACAGTGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGTGAGACACAGTGGCACAAACCATGACCAGGCTCTACAAAAACCC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84599738, "gff_end": 84600068, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04129", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV11-25*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV11-25*02", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCAAAAACTGGAGGCACAGTGCAACAGCTCAATGGAAGACCTGGACAAAAACA", "coding_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCAAAAACTGGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "25", "subgroup_designation": "11", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCAAAAACTGGAGG", "aligned_sequence": "AGCATTAGTTTGACCTCC......TCCCCTGCT...CAACTCAAACCTCCTGGAGAGTCAGTGAAACTA...TCTTGCCAAGTCTCTGGCTATGTCCTG............ACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGT.........GGATCCATCAACTCTGGGGCCTCTTTTAAG...AGCAGATTCACCATCTCCAGAGAC...AGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCAAAAACTGGAGG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2938", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCAAAAACTGGAGGCACAGTGCAACAGCTCAATGGAAGACCTGGACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51850492, "gff_end": 51850826, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04130", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV11-28-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV11-28-3*01", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGCCCTGACAGACTATGGTACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGAGTGGTGGATCAATTGAATCTGGAGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGGTGGTCACAGTGATACAAACCAGCACCAGACCTGTACAAAAACT", "coding_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGCCCTGACAGACTATGGTACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGAGTGGTGGATCAATTGAATCTGGAGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGGTGGT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "28-3", "subgroup_designation": "11", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGCCCTGACAGACTATGGTACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGAGTGGTGGATCAATTGAATCTGGAGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGGTGGT", "aligned_sequence": "AGCATTAGTTTGACCTCC......TCCCCTGCT...CAACTCAAACCTCCTGGAGAGTCAGTGAAACTA...TCTTGCCAAGTCTCTGGCTATGCCCTG............ACAGACTATGGTACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGAGTGGT.........GGATCAATTGAATCTGGAGCCTCTTTTAAG...AGCAGATTCACCATCTCCAGAGAC...AGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGGTGGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2939", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGCCCTGACAGACTATGGTACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGAGTGGTGGATCAATTGAATCTGGAGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGGTGGTCACAGTGATACAAACCAGCACCAGACCTGTACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51837335, "gff_end": 51837665, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04131", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV11-47-2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV11-47-2*01", "sequence": "AGCATTAGTCTGACATCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCAAAGTCTCTGGCTATGCCCTGACGGCCTATGGTACAGGATGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTAGTGGATCCATCACTTCTGGAGACTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATTACCAGTCTGCAGGCTGAGGACACAGCTGTGTTTTATTGTGCAAAAACTGGAGGCACAGTACAACAGCTCAATGGAAGACCTGTACAAAAACA", "coding_sequence": "AGCATTAGTCTGACATCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCAAAGTCTCTGGCTATGCCCTGACGGCCTATGGTACAGGATGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTAGTGGATCCATCACTTCTGGAGACTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATTACCAGTCTGCAGGCTGAGGACACAGCTGTGTTTTATTGTGCAAAAACTGGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "47-2", "subgroup_designation": "11", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGCATTAGTCTGACATCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCAAAGTCTCTGGCTATGCCCTGACGGCCTATGGTACAGGATGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTAGTGGATCCATCACTTCTGGAGACTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATTACCAGTCTGCAGGCTGAGGACACAGCTGTGTTTTATTGTGCAAAAACTGGAGG", "aligned_sequence": "AGCATTAGTCTGACATCC......TCCCCTGCT...CAACTCAAACCTCCTGGAGAGTCAGTGAAACTA...TCTTGCAAAGTCTCTGGCTATGCCCTG............ACGGCCTATGGTACAGGATGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTAGT.........GGATCCATCACTTCTGGAGACTCTTTTAAG...AGCAGATTCACCATCTCCAGAGAC...AGTAGTAATGTACTGTACTTAGACATTACCAGTCTGCAGGCTGAGGACACAGCTGTGTTTTATTGTGCAAAAACTGGAGG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2876", "sequence": "AGCATTAGTCTGACATCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCAAAGTCTCTGGCTATGCCCTGACGGCCTATGGTACAGGATGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTAGTGGATCCATCACTTCTGGAGACTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATTACCAGTCTGCAGGCTGAGGACACAGCTGTGTTTTATTGTGCAAAAACTGGAGGCACAGTACAACAGCTCAATGGAAGACCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51642015, "gff_end": 51642349, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04132", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV11-47-5*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV11-47-5*01", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGACAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGCTACCCACAGAGATAGAAACCAGCACCAGACCTGTACAAAAACT", "coding_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGACAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGCTACC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "47-5", "subgroup_designation": "11", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGACAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGCTACC", "aligned_sequence": "AGCATTAGTTTGACCTCC......TCCCCTGCT...CAACTCAAACCTCCTGGACAGTCAGTGAAACTA...TCTTGCCAAGTCTCTGGCTATGTCCTG............ACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGT.........GGATCCATCAACTCTGGGGCCTCTTTTAAG...AGCAGATTCACCATCTCCAGAGAC...AGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGCTACC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2940", "sequence": "AGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGACAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAGTAGTAATGTACTGTACTTAGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTGTATTATTGTGCTCGCTACCCACAGAGATAGAAACCAGCACCAGACCTGTACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51628104, "gff_end": 51628434, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04133", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV12D-36*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV12D-36*02", "sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGATTATCACCTGTAAGGTATCTGGTTATTCTCTGACTGATAGCAGCAACGTCTATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGTTGGAAGCTCAGACTCTCAAAGTTCCCTAACAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGCCACAGTGATACAAACCACCAACAGACTAGTACAAAAACC", "coding_sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGATTATCACCTGTAAGGTATCTGGTTATTCTCTGACTGATAGCAGCAACGTCTATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGTTGGAAGCTCAGACTCTCAAAGTTCCCTAACAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "36", "subgroup_designation": "12D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 307, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 308, "v_rs_end": 346, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGATTATCACCTGTAAGGTATCTGGTTATTCTCTGACTGATAGCAGCAACGTCTATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGTTGGAAGCTCAGACTCTCAAAGTTCCCTAACAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "aligned_sequence": "GGTCTTGAGCTCACCCAA......CCAAGCTCA...TTGGATGTAAAGCCTGGAGAGTCTTTGATTATC...ACCTGTAAGGTATCTGGTTATTCTCTGACTGATAGCAGCAACGTCTATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGTT.........GGAAGCTCAGACTCTCAAAGTTCCCTAACA...GACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 297, "cdr3_start": 298, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2877", "sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGATTATCACCTGTAAGGTATCTGGTTATTCTCTGACTGATAGCAGCAACGTCTATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGTTGGAAGCTCAGACTCTCAAAGTTCCCTAACAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGCCACAGTGATACAAACCACCAACAGACTAGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84492653, "gff_end": 84492998, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04134", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV12D-71*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV12D-71*02", "sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGAGCATCACCTGTAAGGTCTCTGGTTATTCTCTGACTGATAGCAGCAACGTCCATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGATGGAAGCTCATACTCTCAAAGTTCCCTAAAAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGCCACAGTGATACAAACCACCAACAGACCAGTACAAAAACC", "coding_sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGAGCATCACCTGTAAGGTCTCTGGTTATTCTCTGACTGATAGCAGCAACGTCCATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGATGGAAGCTCATACTCTCAAAGTTCCCTAAAAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "71", "subgroup_designation": "12D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 307, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 308, "v_rs_end": 346, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGAGCATCACCTGTAAGGTCTCTGGTTATTCTCTGACTGATAGCAGCAACGTCCATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGATGGAAGCTCATACTCTCAAAGTTCCCTAAAAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "aligned_sequence": "GGTCTTGAGCTCACCCAA......CCAAGCTCA...TTGGATGTAAAGCCTGGAGAGTCTTTGAGCATC...ACCTGTAAGGTCTCTGGTTATTCTCTGACTGATAGCAGCAACGTCCATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGAT.........GGAAGCTCATACTCTCAAAGTTCCCTAAAA...GACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 297, "cdr3_start": 298, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2878", "sequence": "GGTCTTGAGCTCACCCAACCAAGCTCATTGGATGTAAAGCCTGGAGAGTCTTTGAGCATCACCTGTAAGGTCTCTGGTTATTCTCTGACTGATAGCAGCAACGTCCATGGAATAGGCTGGATCCGTCAGCCTGTAGGAAAAGCACTTGAATGGATTTGGACCATCTATTATGATGGAAGCTCATACTCTCAAAGTTCCCTAAAAGACAGGTTCAGTGTCACAAGAGACACTTCCAGCAACACAGTGTTTTTAAAAGGACAGAATCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGGTGGCCACAGTGATACAAACCACCAACAGACCAGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84404925, "gff_end": 84405270, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04135", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV14-33*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV14-33*02", "sequence": "AGTGTTGAACACAACCAGCCAAACTCATTGAGTTTAAAGCCTGGAGAAACTTTGACTATCAGTTGTGCAATCTCTGGGTATTCTCTTACAGACAACATCTATGCGGTAGCTTGGATCCGACAGTCTGCAGGGAAACCAATGGAATGCATTTTTTATATTTGGGGTGGTGGTAGTTTTTACCTTAACAATGCACTAAAAAACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAACTCTAATAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGACGACCACAGTGATACAAACCAACACAGGACCTGTACAAAAACC", "coding_sequence": "AGTGTTGAACACAACCAGCCAAACTCATTGAGTTTAAAGCCTGGAGAAACTTTGACTATCAGTTGTGCAATCTCTGGGTATTCTCTTACAGACAACATCTATGCGGTAGCTTGGATCCGACAGTCTGCAGGGAAACCAATGGAATGCATTTTTTATATTTGGGGTGGTGGTAGTTTTTACCTTAACAATGCACTAAAAAACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAACTCTAATAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGACGAC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "33", "subgroup_designation": "14", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 301, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 302, "v_rs_end": 340, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTGTTGAACACAACCAGCCAAACTCATTGAGTTTAAAGCCTGGAGAAACTTTGACTATCAGTTGTGCAATCTCTGGGTATTCTCTTACAGACAACATCTATGCGGTAGCTTGGATCCGACAGTCTGCAGGGAAACCAATGGAATGCATTTTTTATATTTGGGGTGGTGGTAGTTTTTACCTTAACAATGCACTAAAAAACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAACTCTAATAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGACGAC", "aligned_sequence": "AGTGTTGAACACAACCAG......CCAAACTCA...TTGAGTTTAAAGCCTGGAGAAACTTTGACTATC...AGTTGTGCAATCTCTGGGTATTCTCTTACA......GACAACATCTATGCGGTAGCTTGGATCCGACAGTCTGCAGGGAAACCAATGGAATGCATTTTTTATATTTGGGGTGGT.........GGTAGTTTTTACCTTAACAATGCACTAAAA...AACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAACTCTAATAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGACGAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2941", "sequence": "AGTGTTGAACACAACCAGCCAAACTCATTGAGTTTAAAGCCTGGAGAAACTTTGACTATCAGTTGTGCAATCTCTGGGTATTCTCTTACAGACAACATCTATGCGGTAGCTTGGATCCGACAGTCTGCAGGGAAACCAATGGAATGCATTTTTTATATTTGGGGTGGTGGTAGTTTTTACCTTAACAATGCACTAAAAAACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAACTCTAATAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGACGACCACAGTGATACAAACCAACACAGGACCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51756639, "gff_end": 51756978, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04136", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV15-48*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV15-48*02", "sequence": "AGTCAAACTATGGAATCCATTCCCTCCAGTCCACTCCAGAAAAAGCCAGGAGAAACTCTCAACCTCTCTTGCAGAGGAACTGGGTATACCTTTACAAGCTATGGTATGAACTGGATTCGCCAACCTACAGGGAAACCATTGGAATGGATGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAATCCCTGGAGGGACGGATTGAACTGACCAAAGACAGCTCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGTGCACGCAGGACACAGTGATGTGAATGTGTGGTGGATCTGTACAAAAACC", "coding_sequence": "AGTCAAACTATGGAATCCATTCCCTCCAGTCCACTCCAGAAAAAGCCAGGAGAAACTCTCAACCTCTCTTGCAGAGGAACTGGGTATACCTTTACAAGCTATGGTATGAACTGGATTCGCCAACCTACAGGGAAACCATTGGAATGGATGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAATCCCTGGAGGGACGGATTGAACTGACCAAAGACAGCTCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGTGCACGCAGGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "48", "subgroup_designation": "15", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAAACTATGGAATCCATTCCCTCCAGTCCACTCCAGAAAAAGCCAGGAGAAACTCTCAACCTCTCTTGCAGAGGAACTGGGTATACCTTTACAAGCTATGGTATGAACTGGATTCGCCAACCTACAGGGAAACCATTGGAATGGATGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAATCCCTGGAGGGACGGATTGAACTGACCAAAGACAGCTCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGTGCACGCAGGA", "aligned_sequence": "AGTCAAACTATGGAATCCATTCCCTCCAGTCCA...CTCCAGAAAAAGCCAGGAGAAACTCTCAACCTC...TCTTGCAGAGGAACTGGGTATACCTTT............ACAAGCTATGGTATGAACTGGATTCGCCAACCTACAGGGAAACCATTGGAATGGATGGGCTGGATCAACACCAAT......ACTGGAGCAGCAGGCTATGCCAAATCCCTGGAG...GGACGGATTGAACTGACCAAAGACAGCTCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGTGCACGCAGGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2942", "sequence": "AGTCAAACTATGGAATCCATTCCCTCCAGTCCACTCCAGAAAAAGCCAGGAGAAACTCTCAACCTCTCTTGCAGAGGAACTGGGTATACCTTTACAAGCTATGGTATGAACTGGATTCGCCAACCTACAGGGAAACCATTGGAATGGATGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAATCCCTGGAGGGACGGATTGAACTGACCAAAGACAGCTCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGTGCACGCAGGACACAGTGATGTGAATGTGTGGTGGATCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51625869, "gff_end": 51626211, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04138", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV15D-66*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV15D-66*02", "sequence": "ACACAGTGCCTTAGACCACTGCGCCACACGGGAGCCCTGGAGAAACCTGGAGAAACTCTCAACCTATCTTGCAGAGGAACTGGGTATACCTTTACAAGCTCTGGTTTGATCTGGATTCACCAACCTACAGGGAAACCATTGGAATGGGTGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAAACCCTGGAGGGACAGATTGAACTGACCAAAGACAGCCCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGGGTACAGTGAAGTGAATGTGTGGTGGATCTGTACAAAATCCCTCAGACA", "coding_sequence": "ACACAGTGCCTTAGACCACTGCGCCACACGGGAGCCCTGGAGAAACCTGGAGAAACTCTCAACCTATCTTGCAGAGGAACTGGGTATACCTTTACAAGCTCTGGTTTGATCTGGATTCACCAACCTACAGGGAAACCATTGGAATGGGTGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAAACCCTGGAGGGACAGATTGAACTGACCAAAGACAGCCCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGGGTACAGTGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "66", "subgroup_designation": "15D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 303, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 304, "v_rs_end": 342, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "ACACAGTGCCTTAGACCACTGCGCCACACGGGAGCCCTGGAGAAACCTGGAGAAACTCTCAACCTATCTTGCAGAGGAACTGGGTATACCTTTACAAGCTCTGGTTTGATCTGGATTCACCAACCTACAGGGAAACCATTGGAATGGGTGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAAACCCTGGAGGGACAGATTGAACTGACCAAAGACAGCCCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGGGTACAGTGA", "aligned_sequence": "ACACAGTGCCTTAGACCACTGCGCCACACGGGA...GCCCTGGAGAAACCTGGAGAAACTCTCAACCTA...TCTTGCAGAGGAACTGGGTATACCTTT............ACAAGCTCTGGTTTGATCTGGATTCACCAACCTACAGGGAAACCATTGGAATGGGTGGGCTGGATCAACACCAAT......ACTGGAGCAGCAGGCTATGCCAAAACCCTGGAG...GGACAGATTGAACTGACCAAAGACAGCCCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGGGTACAGTGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2944", "sequence": "ACACAGTGCCTTAGACCACTGCGCCACACGGGAGCCCTGGAGAAACCTGGAGAAACTCTCAACCTATCTTGCAGAGGAACTGGGTATACCTTTACAAGCTCTGGTTTGATCTGGATTCACCAACCTACAGGGAAACCATTGGAATGGGTGGGCTGGATCAACACCAATACTGGAGCAGCAGGCTATGCCAAAACCCTGGAGGGACAGATTGAACTGACCAAAGACAGCCCAGTGAGCATGACACATCTGAAACTGTCTGGTCTGAAGGCAGAGGACTCTGCTGTGTATTACTGGGTACAGTGAAGTGAATGTGTGGTGGATCTGTACAAAATCCCTCAGACA", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84439472, "gff_end": 84439813, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04137", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV15D-69-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV15D-69-3*01", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTAGTCCAGTCATGAAAAAGCCTGGAGAAACTCTCAATCTCTCCTGTAAAGGATCTGGGTATACTTTTGGAAACCATGCCGTGCACTGGGTACGACAACCAAAAGGAAAAGGACTGGAGTGGATAGGACGTGTGAGAACAGATACTGGTGAAGCAACGTATGCCAACAGCGTTAGTGGACGCCTTGAAATAACTAAGGACAATGCCCAAAGCATGTCATTCCTGAAGCTGTCTGGTGTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGTCAGACACAGTCGTGTGAGTGAGTGGAGGATCTGTACAAAAACC", "coding_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTAGTCCAGTCATGAAAAAGCCTGGAGAAACTCTCAATCTCTCCTGTAAAGGATCTGGGTATACTTTTGGAAACCATGCCGTGCACTGGGTACGACAACCAAAAGGAAAAGGACTGGAGTGGATAGGACGTGTGAGAACAGATACTGGTGAAGCAACGTATGCCAACAGCGTTAGTGGACGCCTTGAAATAACTAAGGACAATGCCCAAAGCATGTCATTCCTGAAGCTGTCTGGTGTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGTCAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "69-3", "subgroup_designation": "15D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTAGTCCAGTCATGAAAAAGCCTGGAGAAACTCTCAATCTCTCCTGTAAAGGATCTGGGTATACTTTTGGAAACCATGCCGTGCACTGGGTACGACAACCAAAAGGAAAAGGACTGGAGTGGATAGGACGTGTGAGAACAGATACTGGTGAAGCAACGTATGCCAACAGCGTTAGTGGACGCCTTGAAATAACTAAGGACAATGCCCAAAGCATGTCATTCCTGAAGCTGTCTGGTGTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGTCAGA", "aligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTAGTCCA...GTCATGAAAAAGCCTGGAGAAACTCTCAATCTC...TCCTGTAAAGGATCTGGGTATACTTTT............GGAAACCATGCCGTGCACTGGGTACGACAACCAAAAGGAAAAGGACTGGAGTGGATAGGACGTGTGAGAACAGAT......ACTGGTGAAGCAACGTATGCCAACAGCGTTAGT...GGACGCCTTGAAATAACTAAGGACAATGCCCAAAGCATGTCATTCCTGAAGCTGTCTGGTGTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGTCAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2943", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTAGTCCAGTCATGAAAAAGCCTGGAGAAACTCTCAATCTCTCCTGTAAAGGATCTGGGTATACTTTTGGAAACCATGCCGTGCACTGGGTACGACAACCAAAAGGAAAAGGACTGGAGTGGATAGGACGTGTGAGAACAGATACTGGTGAAGCAACGTATGCCAACAGCGTTAGTGGACGCCTTGAAATAACTAAGGACAATGCCCAAAGCATGTCATTCCTGAAGCTGTCTGGTGTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGTCAGACACAGTCGTGTGAGTGAGTGGAGGATCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84426444, "gff_end": 84426786, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04140", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-14*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-14*02", "sequence": "AGTCAGAGTCTGGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGACTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGGAGTGATGCTAGTGGAACTGTATATACAAAAAGTGTTGAAGGATGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "coding_sequence": "AGTCAGAGTCTGGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGACTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGGAGTGATGCTAGTGGAACTGTATATACAAAAAGTGTTGAAGGATGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "14", "subgroup_designation": "16", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGAGTCTGGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGACTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGGAGTGATGCTAGTGGAACTGTATATACAAAAAGTGTTGAAGGATGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "aligned_sequence": "AGTCAGAGTCTGGAGGACATTCCCTCCAGTCCA...GTCCTGAAAAAGACTGCAGAACCTCTCAGCCTC...TCCTGTAAGGGATCTGGCTTTACCTTT............AGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGGAGTGAT......GCTAGTGGAACTGTATATACAAAAAGTGTTGAA...GGATGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2946", "sequence": "AGTCAGAGTCTGGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGACTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGGAGTGATGCTAGTGGAACTGTATATACAAAAAGTGTTGAAGGATGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51945316, "gff_end": 51945658, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04139", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-37*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-37*01", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGAAAAAGCACTGGACTGGATGGGATTAATCTACTATGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGACAGACACTGTGGTGTGAGTGAGTGGAGGATCTGTACAAAAACC", "coding_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGAAAAAGCACTGGACTGGATGGGATTAATCTACTATGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGACAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "37", "subgroup_designation": "16", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGAAAAAGCACTGGACTGGATGGGATTAATCTACTATGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGACAGA", "aligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCA...GTCCTGAAAAAGCCTGGAGATACTCTCAGCCTC...TCCTGTAAGGGAGATGGCTTTACATTT............AGTAGCTATGGCATGCACTGGATACGACAACCTGCAGAAAAAGCACTGGACTGGATGGGATTAATCTACTATGAT......GCCAGCAAAACGATCTATTCAAAAAATATTGAA...GGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGACAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2945", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGAAAAAGCACTGGACTGGATGGGATTAATCTACTATGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGACAGACACTGTGGTGTGAGTGAGTGGAGGATCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51722871, "gff_end": 51723213, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04141", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-38*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-38*02", "sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCATGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTAACTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAACACTTGAATGGATAGGCATTATATGGAGTGATGCTGGTGGAACTGTATATACAAAAAGAGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "coding_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCATGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTAACTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAACACTTGAATGGATAGGCATTATATGGAGTGATGCTGGTGGAACTGTATATACAAAAAGAGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "38", "subgroup_designation": "16", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCATGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTAACTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAACACTTGAATGGATAGGCATTATATGGAGTGATGCTGGTGGAACTGTATATACAAAAAGAGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "aligned_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCA...GTCATGAAAAAGCCTGGAGAACCTCTCAGCCTC...TCCTGTAAGGGATCTGGCTTTAACTTT............AGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAACACTTGAATGGATAGGCATTATATGGAGTGAT......GCTGGTGGAACTGTATATACAAAAAGAGTTGAA...GGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2947", "sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCATGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTAACTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAACACTTGAATGGATAGGCATTATATGGAGTGATGCTGGTGGAACTGTATATACAAAAAGAGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51720757, "gff_end": 51721099, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04142", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-39-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-39-3*01", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGGAAAAGCACTGGACTGGATGGGATTAATCTACTCTGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGAGTGGAGGATCTGTACAAAAAAC", "coding_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGGAAAAGCACTGGACTGGATGGGATTAATCTACTCTGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "39-3", "subgroup_designation": "16", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGGAAAAGCACTGGACTGGATGGGATTAATCTACTCTGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "aligned_sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCA...GTCCTGAAAAAGCCTGGAGATACTCTCAGCCTC...TCCTGTAAGGGAGATGGCTTTACATTT............AGTAGCTATGGCATGCACTGGATACGACAACCTGCAGGAAAAGCACTGGACTGGATGGGATTAATCTACTCTGAT......GCCAGCAAAACGATCTATTCAAAAAATATTGAA...GGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2948", "sequence": "GGTCAGAGTATGGAGTCCATTCCCTCTGGTCCAGTCCTGAAAAAGCCTGGAGATACTCTCAGCCTCTCCTGTAAGGGAGATGGCTTTACATTTAGTAGCTATGGCATGCACTGGATACGACAACCTGCAGGAAAAGCACTGGACTGGATGGGATTAATCTACTCTGATGCCAGCAAAACGATCTATTCAAAAAATATTGAAGGACGTATAGAAGTCACCAGAGATAATTCTAACAGCGTGGTGTATCTGAAGCTCTCTGGTCTAAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGAGTGGAGGATCTGTACAAAAAAC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51703129, "gff_end": 51703471, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04143", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-39-4*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-39-4*01", "sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGACACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "coding_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "39-4", "subgroup_designation": "16", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGA", "aligned_sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCA...GTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTC...TCCTGTAAGGGATCTGGCTTTACCTTT............AGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGAT......GCTGGTGGAACTGTATATACAAAAAGTGTTGAA...GGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2949", "sequence": "AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGACACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51701013, "gff_end": 51701355, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04144", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-50*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-50*01", "sequence": "GGTCAGAGTCTAGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCAGCTGTCTATTATTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAACGCCCCTT", "coding_sequence": "GGTCAGAGTCTAGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCAGCTGTCTATTATTGTGCAAGAGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "50", "subgroup_designation": "16", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTAGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCAGCTGTCTATTATTGTGCAAGAGAGG", "aligned_sequence": "GGTCAGAGTCTAGAGGACATTCCCTCCAGTCCA...GTCCTGAAAAAGCCTGCAGAACCTCTCAGCCTC...TCCTGTAAGGGATCTGGCTTTACCTTT............AGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGAT......GCTGGTGGAACTGTATATACAAAAAGTGTTGAA...GGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCAGCTGTCTATTATTGTGCAAGAGAGG", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2950", "sequence": "GGTCAGAGTCTAGAGGACATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGTAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCAGCTGTCTATTATTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAACGCCCCTT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51604449, "gff_end": 51604791, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04145", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16-9*03.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16-9*03", "sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGTACCTCTCAGCCTCTCCTGTAAGGGATCTGCCTATATATGTAGTAGCTACCATATTGGCTGGATAAGACAACCAGCATGAAAAGCTTGAGAATGGATTGGCGCTGTATGAAGTGATGCTAGTGGAACTGTGTATGCAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAAAACATT", "coding_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGTACCTCTCAGCCTCTCCTGTAAGGGATCTGCCTATATATGTAGTAGCTACCATATTGGCTGGATAAGACAACCAGCATGAAAAGCTTGAGAATGGATTGGCGCTGTATGAAGTGATGCTAGTGGAACTGTGTATGCAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "9", "subgroup_designation": "16", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 305, "v_rs_end": 343, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGTACCTCTCAGCCTCTCCTGTAAGGGATCTGCCTATATATGTAGTAGCTACCATATTGGCTGGATAAGACAACCAGCATGAAAAGCTTGAGAATGGATTGGCGCTGTATGAAGTGATGCTAGTGGAACTGTGTATGCAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "aligned_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCA...GTCCTGAAAAAGCCTGGAGTACCTCTCAGCCTC...TCCTGTAAGGGATCTGCCTATATATGT............AGTAGCTACCATATTGGCTGGATAAGACAACCAGCATGAAAAGCTTGAGAATGGATTGGCGCTGTATGAAGTGAT......GCTAGTGGAACTGTGTATGCAAAAAGTGTTGAA...GGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGG", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2879", "sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGTACCTCTCAGCCTCTCCTGTAAGGGATCTGCCTATATATGTAGTAGCTACCATATTGGCTGGATAAGACAACCAGCATGAAAAGCTTGAGAATGGATTGGCGCTGTATGAAGTGATGCTAGTGGAACTGTGTATGCAAAAAGTGTTGAAGGACGGATAGAAGTCACCAGAGACAATTCTAACAGCATGTTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCAAGAGAGGCACAGTGGTGTGAGTGGAGGATCTGTACAAAAAAACATT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51960662, "gff_end": 51961004, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04146", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV16D-79*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV16D-79*02", "sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGCGTTTAACTTTAGTAGCTAAAACATGGCCTGGATACATCAACCTGTAGGAAGAGCACTTGAATTGATAGGCATTAATGCTAGTGGAACTACATATGCAAAAAGAGTTGAAGGACAGGTAGAAGTCACCATAGAGAATTCTAACAGCATCGTGTATCTGAAGCTGTCTGTTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACAAGAGACACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "coding_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGCGTTTAACTTTAGTAGCTAAAACATGGCCTGGATACATCAACCTGTAGGAAGAGCACTTGAATTGATAGGCATTAATGCTAGTGGAACTACATATGCAAAAAGAGTTGAAGGACAGGTAGAAGTCACCATAGAGAATTCTAACAGCATCGTGTATCTGAAGCTGTCTGTTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACAAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "79", "subgroup_designation": "16D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGCGTTTAACTTTAGTAGCTAAAACATGGCCTGGATACATCAACCTGTAGGAAGAGCACTTGAATTGATAGGCATTAATGCTAGTGGAACTACATATGCAAAAAGAGTTGAAGGACAGGTAGAAGTCACCATAGAGAATTCTAACAGCATCGTGTATCTGAAGCTGTCTGTTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACAAGAGA", "aligned_sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCA...GTCCTGAAAAAGCCTGGAGAACCTCTCAGCCTC...TCCTGTAAGGGATCTGCGTTTAACTTT............AGTAGCTAAAACATGGCCTGGATACATCAACCTGTAGGAAGAGCACTTGAATTGATAGGCATTAATGCTAGT...............GGAACTACATATGCAAAAAGAGTTGAA...GGACAGGTAGAAGTCACCATAGAGAATTCTAACAGCATCGTGTATCTGAAGCTGTCTGTTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACAAGAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2951", "sequence": "GGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGCGTTTAACTTTAGTAGCTAAAACATGGCCTGGATACATCAACCTGTAGGAAGAGCACTTGAATTGATAGGCATTAATGCTAGTGGAACTACATATGCAAAAAGAGTTGAAGGACAGGTAGAAGTCACCATAGAGAATTCTAACAGCATCGTGTATCTGAAGCTGTCTGTTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACAAGAGACACAGTGGTGTGAGTGGAGGATCTGTACAAAAACCCCTC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84377129, "gff_end": 84377462, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04074", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-12*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-12*01", "sequence": "GGTCAGAGGCTGATTCAGTCTGGACCAGTAGTTAAAAAGCCAGAAGAACCACACAAACTGACCTGTACAGCCTCGGATTTAGACATGAATAGCTACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATTACCCATAACAGCAGAAGCACTTTCTACCCCCAGTCTGTTCAAGGTCGGTTCATCATCTCCAGAGACAACAGCATAAAACAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGGGCGGTACATAAACTG", "coding_sequence": "GGTCAGAGGCTGATTCAGTCTGGACCAGTAGTTAAAAAGCCAGAAGAACCACACAAACTGACCTGTACAGCCTCGGATTTAGACATGAATAGCTACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATTACCCATAACAGCAGAAGCACTTTCTACCCCCAGTCTGTTCAAGGTCGGTTCATCATCTCCAGAGACAACAGCATAAAACAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "12", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGGCTGATTCAGTCTGGACCAGTAGTTAAAAAGCCAGAAGAACCACACAAACTGACCTGTACAGCCTCGGATTTAGACATGAATAGCTACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATTACCCATAACAGCAGAAGCACTTTCTACCCCCAGTCTGTTCAAGGTCGGTTCATCATCTCCAGAGACAACAGCATAAAACAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGAGGCTGATTCAG......TCTGGACCA...GTAGTTAAAAAGCCAGAAGAACCACACAAACTG...ACCTGTACAGCCTCGGATTTAGACATG............AATAGCTACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATTACCCATAAC......AGCAGAAGCACTTTCTACCCCCAGTCTGTTCAA...GGTCGGTTCATCATCTCCAGAGACAACAGCATAAAACAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2888", "sequence": "GGTCAGAGGCTGATTCAGTCTGGACCAGTAGTTAAAAAGCCAGAAGAACCACACAAACTGACCTGTACAGCCTCGGATTTAGACATGAATAGCTACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATTACCCATAACAGCAGAAGCACTTTCTACCCCCAGTCTGTTCAAGGTCGGTTCATCATCTCCAGAGACAACAGCATAAAACAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGGGCGGTACATAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84579544, "gff_end": 84579878, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04075", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-14-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-14-3*01", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACTTCTGAGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTAGAGTGGGTGTCCTATGTTAGCAGTAGCGGTGGCAGCACTTACTACTCCCAGTCTGTTCAGAGTCGTTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGACTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACATGAGGCTGCAGCACTGTACAAAAACTG", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACTTCTGAGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTAGAGTGGGTGTCCTATGTTAGCAGTAGCGGTGGCAGCACTTACTACTCCCAGTCTGTTCAGAGTCGTTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGACTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "14-3", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACTTCTGAGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTAGAGTGGGTGTCCTATGTTAGCAGTAGCGGTGGCAGCACTTACTACTCCCAGTCTGTTCAGAGTCGTTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGACTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTAGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAACTTCTGAGTTCACATTC............AGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTAGAGTGGGTGTCCTATGTTAGCAGTAGC......GGTGGCAGCACTTACTACTCCCAGTCTGTTCAG...AGTCGTTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGACTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2889", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACTTCTGAGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTAGAGTGGGTGTCCTATGTTAGCAGTAGCGGTGGCAGCACTTACTACTCCCAGTCTGTTCAGAGTCGTTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGACTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACATGAGGCTGCAGCACTGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84556573, "gff_end": 84556907, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04085", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-22*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-22*02", "sequence": "GGTCAGACACTGACTGAGTCTGGACCACACATACTGACCTGTACAGCCTCTGATTTAGACAAGAATAGCCACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGTAATGGGTTGCAACTATTACCCATAACATCAGAAGCACTTTCTACCCCCAGTCTGTTCAGAGTCAGTTCACCATCTCCAGAGACAATAGCAAGCAACAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGGGCTTTACAACAGCTG", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCACACATACTGACCTGTACAGCCTCTGATTTAGACAAGAATAGCCACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGTAATGGGTTGCAACTATTACCCATAACATCAGAAGCACTTTCTACCCCCAGTCTGTTCAGAGTCAGTTCACCATCTCCAGAGACAATAGCAAGCAACAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "22", "subgroup_designation": "1D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 272, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 273, "v_rs_end": 311, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCACACATACTGACCTGTACAGCCTCTGATTTAGACAAGAATAGCCACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGTAATGGGTTGCAACTATTACCCATAACATCAGAAGCACTTTCTACCCCCAGTCTGTTCAGAGTCAGTTCACCATCTCCAGAGACAATAGCAAGCAACAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGA...........................CCACACATACTG...ACCTGTACAGCCTCTGATTTAGACAAG............AATAGCCACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGTAATGGGTTGCAACTATTACCCATAAC......ATCAGAAGCACTTTCTACCCCCAGTCTGTTCAG...AGTCAGTTCACCATCTCCAGAGACAATAGCAAGCAACAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 51, "cdr1_start": 52, "cdr1_end": 75, "fwr2_start": 76, "fwr2_end": 126, "cdr2_start": 127, "cdr2_end": 150, "fwr3_start": 151, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2898", "sequence": "GGTCAGACACTGACTGAGTCTGGACCACACATACTGACCTGTACAGCCTCTGATTTAGACAAGAATAGCCACTGGATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGTAATGGGTTGCAACTATTACCCATAACATCAGAAGCACTTTCTACCCCCAGTCTGTTCAGAGTCAGTTCACCATCTCCAGAGACAATAGCAAGCAACAGGTGTATCTCCAGATGAACAGCTTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGGGCTTTACAACAGCTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84539219, "gff_end": 84539529, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04082", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-4*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-4*02", "sequence": "AGTCAAACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTTTAGAAGCCCACAAACTGACCTGTACAGCCTCTAATTTAGACATAAATGGCTATTGGATTGCATGGATCAAACAGGCTCCTGGTAAAGGACTAGAATTTGTGGCAGCGCATTATGACATTAGAAATATTGCCTACTCTCAGTCTGTTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCATGAAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTGTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCGCTGTGCATAAACTG", "coding_sequence": "AGTCAAACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTTTAGAAGCCCACAAACTGACCTGTACAGCCTCTAATTTAGACATAAATGGCTATTGGATTGCATGGATCAAACAGGCTCCTGGTAAAGGACTAGAATTTGTGGCAGCGCATTATGACATTAGAAATATTGCCTACTCTCAGTCTGTTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCATGAAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTGTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "4", "subgroup_designation": "1D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 294, "v_rs_end": 332, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAAACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTTTAGAAGCCCACAAACTGACCTGTACAGCCTCTAATTTAGACATAAATGGCTATTGGATTGCATGGATCAAACAGGCTCCTGGTAAAGGACTAGAATTTGTGGCAGCGCATTATGACATTAGAAATATTGCCTACTCTCAGTCTGTTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCATGAAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTGTATTATTGTGCCAGAGA", "aligned_sequence": "AGTCAAACACTGACTGAG......TCTGGACCA...GTGGTTAAAAAGCCTTTAGAAGCCCACAAACTG...ACCTGTACAGCCTCTAATTTAGACATA............AATGGCTATTGGATTGCATGGATCAAACAGGCTCCTGGTAAAGGACTAGAATTTGTGGCAGCGCATTATGACATT.........AGAAATATTGCCTACTCTCAGTCTGTTCAG...GGTCGGTTCACCATCTCCAGAGACAACAGCATGAAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTGTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2895", "sequence": "AGTCAAACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTTTAGAAGCCCACAAACTGACCTGTACAGCCTCTAATTTAGACATAAATGGCTATTGGATTGCATGGATCAAACAGGCTCCTGGTAAAGGACTAGAATTTGTGGCAGCGCATTATGACATTAGAAATATTGCCTACTCTCAGTCTGTTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCATGAAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTGTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCGCTGTGCATAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84742390, "gff_end": 84742721, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04086", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-4-2*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-4-2*02", "sequence": "GGTCAGACAGCGACTCAGTCTGAATCTGTAGATAAAAAACTGACTTTTACATACACTGGGTTTAGTGGCCATGATTGGTATGCTTGGATCAGACAGGCACCTGGGAAAGGACTGGAGTGCAACGCAACTATTGGGAGTGGTAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGTTCACAATCTCCAGAGACAACAGCAAGTAGTAGGTGTATCTCCAGATGAACAGCATAAAGACTGAAGACTCTCCTGTTTATTATTGTGCCAGAGACACAGGAGGCTGCAGTGCTGTACAAAACCTGGTCGACAC", "coding_sequence": "GGTCAGACAGCGACTCAGTCTGAATCTGTAGATAAAAAACTGACTTTTACATACACTGGGTTTAGTGGCCATGATTGGTATGCTTGGATCAGACAGGCACCTGGGAAAGGACTGGAGTGCAACGCAACTATTGGGAGTGGTAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGTTCACAATCTCCAGAGACAACAGCAAGTAGTAGGTGTATCTCCAGATGAACAGCATAAAGACTGAAGACTCTCCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "4-2", "subgroup_designation": "1D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 269, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 270, "v_rs_end": 308, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACAGCGACTCAGTCTGAATCTGTAGATAAAAAACTGACTTTTACATACACTGGGTTTAGTGGCCATGATTGGTATGCTTGGATCAGACAGGCACCTGGGAAAGGACTGGAGTGCAACGCAACTATTGGGAGTGGTAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGTTCACAATCTCCAGAGACAACAGCAAGTAGTAGGTGTATCTCCAGATGAACAGCATAAAGACTGAAGACTCTCCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACAGCGACTCAG......TCTGAATCT...GTAGATAAA..................AAACTG...ACTTTTACATACACTGGGTTTAGTGGC...............CATGATTGGTATGCTTGGATCAGACAGGCACCTGGGAAAGGACTGGAGTGCAACGCAACTATTGGGAGT............GGTAGCACTTACTACCCCCAGTCTGTTCAG...GGTCGGTTCACAATCTCCAGAGACAACAGCAAGTAGTAGGTGTATCTCCAGATGAACAGCATAAAGACTGAAGACTCTCCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 57, "cdr1_start": 58, "cdr1_end": 78, "fwr2_start": 79, "fwr2_end": 129, "cdr2_start": 130, "cdr2_end": 147, "fwr3_start": 148, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2899", "sequence": "GGTCAGACAGCGACTCAGTCTGAATCTGTAGATAAAAAACTGACTTTTACATACACTGGGTTTAGTGGCCATGATTGGTATGCTTGGATCAGACAGGCACCTGGGAAAGGACTGGAGTGCAACGCAACTATTGGGAGTGGTAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGTTCACAATCTCCAGAGACAACAGCAAGTAGTAGGTGTATCTCCAGATGAACAGCATAAAGACTGAAGACTCTCCTGTTTATTATTGTGCCAGAGACACAGGAGGCTGCAGTGCTGTACAAAACCTGGTCGACAC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84739518, "gff_end": 84739825, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04076", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-70*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-70*01", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCCTCTGGGTTCACATTCAGTAGCTATGCGATGAACTGGGTCAGACAGGCTCCTGGGAAAGGATTAGAGTGGATTGCTTATATCAGCACAGCTAGTACACCCATATATTACTCCCAGTCAGTCCAGGGTAGATTCACCATCTCTAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAAGACACAGCGGTGTATTACTGTGCCCGGTACACACAGTAAGAGAGAGTGGTGGGAGAGCTGTGCAAAAACC", "coding_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCCTCTGGGTTCACATTCAGTAGCTATGCGATGAACTGGGTCAGACAGGCTCCTGGGAAAGGATTAGAGTGGATTGCTTATATCAGCACAGCTAGTACACCCATATATTACTCCCAGTCAGTCCAGGGTAGATTCACCATCTCTAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAAGACACAGCGGTGTATTACTGTGCCCGGTACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "70", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCCTCTGGGTTCACATTCAGTAGCTATGCGATGAACTGGGTCAGACAGGCTCCTGGGAAAGGATTAGAGTGGATTGCTTATATCAGCACAGCTAGTACACCCATATATTACTCCCAGTCAGTCCAGGGTAGATTCACCATCTCTAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAAGACACAGCGGTGTATTACTGTGCCCGGTACA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGGACCA...GTGGTTAAAAAGCCTGGAGAATCACACAAACTG...ACCTGTACAGCCTCTGGGTTCACATTC............AGTAGCTATGCGATGAACTGGGTCAGACAGGCTCCTGGGAAAGGATTAGAGTGGATTGCTTATATCAGCACAGCT......AGTACACCCATATATTACTCCCAGTCAGTCCAG...GGTAGATTCACCATCTCTAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAAGACACAGCGGTGTATTACTGTGCCCGGTACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2890", "sequence": "GGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAGCCTCTGGGTTCACATTCAGTAGCTATGCGATGAACTGGGTCAGACAGGCTCCTGGGAAAGGATTAGAGTGGATTGCTTATATCAGCACAGCTAGTACACCCATATATTACTCCCAGTCAGTCCAGGGTAGATTCACCATCTCTAGAGATGACTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAAGAGTGAAGACACAGCGGTGTATTACTGTGCCCGGTACACACAGTAAGAGAGAGTGGTGGGAGAGCTGTGCAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84422672, "gff_end": 84423008, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04077", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-73*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-73*02", "sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCATGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATCAGTGATGGTGGCAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGATGCTGCAGCGGTGTACAAAAACTG", "coding_sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCATGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATCAGTGATGGTGGCAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "73", "subgroup_designation": "1D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 291, "v_rs_end": 329, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCATGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATCAGTGATGGTGGCAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACACTGACGGAG......TCTGAATCA...GTGGTTAAAAAGCATGGAGAATCCCACAAACTG...ACCTGTACATATTCTGGGTTTGGTGGC...............AACTATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATCAGTGATGGT.........GGCAGCACTTACTACCCCCAGTCTGTTCAG...GGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2891", "sequence": "GGTCAGACACTGACGGAGTCTGAATCAGTGGTTAAAAAGCATGGAGAATCCCACAAACTGACCTGTACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGGTTGCAACTATCAGTGATGGTGGCAGCACTTACTACCCCCAGTCTGTTCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGATGCTGCAGCGGTGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84401443, "gff_end": 84401771, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04078", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-8-10*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-8-10*01", "sequence": "AGTCAGACACTGACTGAGTCTGGACCAGCAGTTAACAAGCCTGGGGAACAACACAAACTGACCTGTACATATGCTGGAATCTCAACTAGCTCTGACTTTAGCTGGATCAGACAGGCTTCTGGGAAAGGATTGGAGTGGATAGCTTACATATCTGGTCCAAGTGGTAGTAGCATCTACTACTCCCAGTCAGTCCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGAGACACAGTGACACAGGAGGCTGCAGCACTGTACAAAAACTG", "coding_sequence": "AGTCAGACACTGACTGAGTCTGGACCAGCAGTTAACAAGCCTGGGGAACAACACAAACTGACCTGTACATATGCTGGAATCTCAACTAGCTCTGACTTTAGCTGGATCAGACAGGCTTCTGGGAAAGGATTGGAGTGGATAGCTTACATATCTGGTCCAAGTGGTAGTAGCATCTACTACTCCCAGTCAGTCCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-10", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGACACTGACTGAGTCTGGACCAGCAGTTAACAAGCCTGGGGAACAACACAAACTGACCTGTACATATGCTGGAATCTCAACTAGCTCTGACTTTAGCTGGATCAGACAGGCTTCTGGGAAAGGATTGGAGTGGATAGCTTACATATCTGGTCCAAGTGGTAGTAGCATCTACTACTCCCAGTCAGTCCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGAGA", "aligned_sequence": "AGTCAGACACTGACTGAG......TCTGGACCA...GCAGTTAACAAGCCTGGGGAACAACACAAACTG...ACCTGTACATATGCTGGAATCTCAACT...............AGCTCTGACTTTAGCTGGATCAGACAGGCTTCTGGGAAAGGATTGGAGTGGATAGCTTACATATCTGGTCCAAGT...GGTAGTAGCATCTACTACTCCCAGTCAGTCCAG...GGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2871", "sequence": "AGTCAGACACTGACTGAGTCTGGACCAGCAGTTAACAAGCCTGGGGAACAACACAAACTGACCTGTACATATGCTGGAATCTCAACTAGCTCTGACTTTAGCTGGATCAGACAGGCTTCTGGGAAAGGATTGGAGTGGATAGCTTACATATCTGGTCCAAGTGGTAGTAGCATCTACTACTCCCAGTCAGTCCAGGGTCGGGTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGAGACACAGTGACACAGGAGGCTGCAGCACTGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84618738, "gff_end": 84619074, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04079", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-8-5*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-8-5*01", "sequence": "GGTCAGACACTGACTGAGTCTGTGCCTGTGGGTAAAAAGCCTGGAGAATCACACCAGCTGACCTGTACATATGATGGAATCTCAAACGATAACGCTGCCATTGGCTGGATCAGACAGGCTCCTGGGAAAAGGCTGGAGTGTGTTGCTTATATTTCTGCTCCAAGTGGTAGTACTGTCTCCTACTCCCAGTCTGTTAAGAATCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCACTGTACATAAACTG", "coding_sequence": "GGTCAGACACTGACTGAGTCTGTGCCTGTGGGTAAAAAGCCTGGAGAATCACACCAGCTGACCTGTACATATGATGGAATCTCAAACGATAACGCTGCCATTGGCTGGATCAGACAGGCTCCTGGGAAAAGGCTGGAGTGTGTTGCTTATATTTCTGCTCCAAGTGGTAGTACTGTCTCCTACTCCCAGTCTGTTAAGAATCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-5", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 300, "v_rs_end": 338, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGACACTGACTGAGTCTGTGCCTGTGGGTAAAAAGCCTGGAGAATCACACCAGCTGACCTGTACATATGATGGAATCTCAAACGATAACGCTGCCATTGGCTGGATCAGACAGGCTCCTGGGAAAAGGCTGGAGTGTGTTGCTTATATTTCTGCTCCAAGTGGTAGTACTGTCTCCTACTCCCAGTCTGTTAAGAATCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGTCAGACACTGACTGAG......TCTGTGCCT...GTGGGTAAAAAGCCTGGAGAATCACACCAGCTG...ACCTGTACATATGATGGAATCTCAAAC............GATAACGCTGCCATTGGCTGGATCAGACAGGCTCCTGGGAAAAGGCTGGAGTGTGTTGCTTATATTTCTGCTCCAAGT...GGTAGTACTGTCTCCTACTCCCAGTCTGTTAAG...AATCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2892", "sequence": "GGTCAGACACTGACTGAGTCTGTGCCTGTGGGTAAAAAGCCTGGAGAATCACACCAGCTGACCTGTACATATGATGGAATCTCAAACGATAACGCTGCCATTGGCTGGATCAGACAGGCTCCTGGGAAAAGGCTGGAGTGTGTTGCTTATATTTCTGCTCCAAGTGGTAGTACTGTCTCCTACTCCCAGTCTGTTAAGAATCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGAGGCTGCAGCACTGTACATAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84637258, "gff_end": 84637595, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04080", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV1D-8-7*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV1D-8-7*01", "sequence": "AGTCAGATGCTGACTGAATCTGAATCAGTGGTTAAAACGTTTGAAGAATCCCACAAACTGACTTGCACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGGCAGGCTCCAGGGAAAGGGCTAGAATGGGTTGCAACAATTAGTGATTCAAGCAGTTATATCTACTACTCCCAGTCTATTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACATGAGGCTGCAGCACTGTACAAAAACTG", "coding_sequence": "AGTCAGATGCTGACTGAATCTGAATCAGTGGTTAAAACGTTTGAAGAATCCCACAAACTGACTTGCACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGGCAGGCTCCAGGGAAAGGGCTAGAATGGGTTGCAACAATTAGTGATTCAAGCAGTTATATCTACTACTCCCAGTCTATTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-7", "subgroup_designation": "1D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 294, "v_rs_end": 332, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTCAGATGCTGACTGAATCTGAATCAGTGGTTAAAACGTTTGAAGAATCCCACAAACTGACTTGCACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGGCAGGCTCCAGGGAAAGGGCTAGAATGGGTTGCAACAATTAGTGATTCAAGCAGTTATATCTACTACTCCCAGTCTATTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "AGTCAGATGCTGACTGAA......TCTGAATCA...GTGGTTAAAACGTTTGAAGAATCCCACAAACTG...ACTTGCACATATTCTGGGTTTGGTGGC...............AACTATTGGAATGCTTGGATCAGGCAGGCTCCAGGGAAAGGGCTAGAATGGGTTGCAACAATTAGTGATTCA......AGCAGTTATATCTACTACTCCCAGTCTATTCAG...GGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2893", "sequence": "AGTCAGATGCTGACTGAATCTGAATCAGTGGTTAAAACGTTTGAAGAATCCCACAAACTGACTTGCACATATTCTGGGTTTGGTGGCAACTATTGGAATGCTTGGATCAGGCAGGCTCCAGGGAAAGGGCTAGAATGGGTTGCAACAATTAGTGATTCAAGCAGTTATATCTACTACTCCCAGTCTATTCAGGGTCGGTTCACCATCTCCAGAGACAACAGCAAGCAGCAGGTGTATCTCCAGATGAACAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACATGAGGCTGCAGCACTGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84627671, "gff_end": 84628002, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04091", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV2-27*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV2-27*02", "sequence": "GGTCAGAGTCTGGATCCCAGTCCCTCCAGTTCAGTCCTGAAAAAGCTTGGATAAACTATAAGTCTCTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACAATGGATAAGACAGCCAGCTGGAATATCCCTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAAGTTTGAAGGACACATGGAAACGACAAAAGACAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGATACTCAGTGGTGTGAGTGAGAGGAGGATCTGTACAAAAACC", "coding_sequence": "GGTCAGAGTCTGGATCCCAGTCCCTCCAGTTCAGTCCTGAAAAAGCTTGGATAAACTATAAGTCTCTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACAATGGATAAGACAGCCAGCTGGAATATCCCTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAAGTTTGAAGGACACATGGAAACGACAAAAGACAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGATA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "27", "subgroup_designation": "2", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGATCCCAGTCCCTCCAGTTCAGTCCTGAAAAAGCTTGGATAAACTATAAGTCTCTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACAATGGATAAGACAGCCAGCTGGAATATCCCTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAAGTTTGAAGGACACATGGAAACGACAAAAGACAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGATA", "aligned_sequence": "GGTCAGAGTCTGGATCCCAGTCCCTCCAGTTCA...GTCCTGAAAAAGCTTGGATAAACTATAAGTCTC...TCCTGTAAGATATCTGGATTCACCTTT............GACAGCCACAACACACAATGGATAAGACAGCCAGCTGGAATATCCCTGGAATGGATGGGTTACTCTGGATTA............GGCCTAGGTAACCATGCTAAAAAGTTTGAA...GGACACATGGAAACGACAAAAGACAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGATA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2904", "sequence": "GGTCAGAGTCTGGATCCCAGTCCCTCCAGTTCAGTCCTGAAAAAGCTTGGATAAACTATAAGTCTCTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACAATGGATAAGACAGCCAGCTGGAATATCCCTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAAGTTTGAAGGACACATGGAAACGACAAAAGACAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGATACTCAGTGGTGTGAGTGAGAGGAGGATCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51847842, "gff_end": 51848176, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04087", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV2-28*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV2-28*02", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAATTCAGTCATGAAAAAGCCTGAAGAAGCTCTCAGTCTCTCCTGTAAGGGATCTGGGTATACCTTTAGTAGCTACAACACACATTGGATTAGACAACCTGCTGGGAAAGCATTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAGCTTTGAAGGACGTATGGAAACGACTAAAGATAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGAGACACACAGTGGTGTGAGTGAGTGAAGGATCTGTACAAAAACC", "coding_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAATTCAGTCATGAAAAAGCCTGAAGAAGCTCTCAGTCTCTCCTGTAAGGGATCTGGGTATACCTTTAGTAGCTACAACACACATTGGATTAGACAACCTGCTGGGAAAGCATTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAGCTTTGAAGGACGTATGGAAACGACTAAAGATAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGAGACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "28", "subgroup_designation": "2", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAATTCAGTCATGAAAAAGCCTGAAGAAGCTCTCAGTCTCTCCTGTAAGGGATCTGGGTATACCTTTAGTAGCTACAACACACATTGGATTAGACAACCTGCTGGGAAAGCATTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAGCTTTGAAGGACGTATGGAAACGACTAAAGATAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGAGACA", "aligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAATTCA...GTCATGAAAAAGCCTGAAGAAGCTCTCAGTCTC...TCCTGTAAGGGATCTGGGTATACCTTT............AGTAGCTACAACACACATTGGATTAGACAACCTGCTGGGAAAGCATTGGAATGGATGGGTTACTCTGGATTA............GGCCTAGGTAACCATGCTAAAAGCTTTGAA...GGACGTATGGAAACGACTAAAGATAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGAGACA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2900", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAATTCAGTCATGAAAAAGCCTGAAGAAGCTCTCAGTCTCTCCTGTAAGGGATCTGGGTATACCTTTAGTAGCTACAACACACATTGGATTAGACAACCTGCTGGGAAAGCATTGGAATGGATGGGTTACTCTGGATTAGGCCTAGGTAACCATGCTAAAAGCTTTGAAGGACGTATGGAAACGACTAAAGATAATTCCAACAGCATGATGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTGTGCACGAGACACACAGTGGTGTGAGTGAGTGAAGGATCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51846654, "gff_end": 51846990, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04088", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV2-8*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV2-8*01", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCTAGTCCAGTCCAGAAAAATCCCGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACACTGGATACGACAGCCAGCAGGAAAATCCCTGGAGTGGTTGGGTTTTTCTGGATTAGGCCTAGGTTACCATGCTAAAAGGTTTGAAGGACGTATGGAAACCACTAAAGATACTAGTAACAGCATGTTGACTTTGATGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGAGACACAGTGGTGTGAGTGAGTGAAGATTCTGTACAAAAACC", "coding_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCTAGTCCAGTCCAGAAAAATCCCGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACACTGGATACGACAGCCAGCAGGAAAATCCCTGGAGTGGTTGGGTTTTTCTGGATTAGGCCTAGGTTACCATGCTAAAAGGTTTGAAGGACGTATGGAAACCACTAAAGATACTAGTAACAGCATGTTGACTTTGATGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8", "subgroup_designation": "2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 297, "v_rs_end": 335, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCTAGTCCAGTCCAGAAAAATCCCGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACACTGGATACGACAGCCAGCAGGAAAATCCCTGGAGTGGTTGGGTTTTTCTGGATTAGGCCTAGGTTACCATGCTAAAAGGTTTGAAGGACGTATGGAAACCACTAAAGATACTAGTAACAGCATGTTGACTTTGATGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGAGA", "aligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCTAGTCCA...GTCCAGAAAAATCCCGGAGAAACTCTCAGTCTG...TCCTGTAAGATATCTGGATTCACCTTT............GACAGCCACAACACACACTGGATACGACAGCCAGCAGGAAAATCCCTGGAGTGGTTGGGTTTTTCTGGATTA............GGCCTAGGTTACCATGCTAAAAGGTTTGAA...GGACGTATGGAAACCACTAAAGATACTAGTAACAGCATGTTGACTTTGATGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2901", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCTAGTCCAGTCCAGAAAAATCCCGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATTCACCTTTGACAGCCACAACACACACTGGATACGACAGCCAGCAGGAAAATCCCTGGAGTGGTTGGGTTTTTCTGGATTAGGCCTAGGTTACCATGCTAAAAGGTTTGAAGGACGTATGGAAACCACTAAAGATACTAGTAACAGCATGTTGACTTTGATGCTGTCTGGTCTGAGAACAGAGGACTCTGCTGTGTATTACTGTGCAAGAGACACAGTGGTGTGAGTGAGTGAAGATTCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51963666, "gff_end": 51964000, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04089", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV2D-11*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV2D-11*02", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATACACTGTTGACAGCCACTACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTAACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGACACAGTGATGTGAGTGAGTGGAGGATCTGTACAAAAACA", "coding_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATACACTGTTGACAGCCACTACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTAACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "11", "subgroup_designation": "2D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATACACTGTTGACAGCCACTACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTAACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "aligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCA...GTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTG...TCCTGTAAGATATCTGGATACACTGTT............GACAGCCACTACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTA............GGCCTAGGTAACCATGCTAAAACTTTTGAA...GGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2902", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATACACTGTTGACAGCCACTACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTAACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGACACAGTGATGTGAGTGAGTGGAGGATCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84595517, "gff_end": 84595853, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04090", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV2D-8-1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV2D-8-1*01", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATATACCGTTTCCAGCCACCACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTTACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGACACAGTGATGTGAGTGAGTGGAGGATCTGTACAAAAACA", "coding_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATATACCGTTTCCAGCCACCACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTTACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-1", "subgroup_designation": "2D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 299, "v_rs_end": 337, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATATACCGTTTCCAGCCACCACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTTACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "aligned_sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCA...GTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTG...TCCTGTAAGATATCTGGATATACCGTT............TCCAGCCACCACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTA............GGCCTAGGTTACCATGCTAAAACTTTTGAA...GGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGA", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2903", "sequence": "GGTCAGAGTCTGGAGTCCATTCCCTCCAGTCCAGTCCTGAAAAAGCCTGGAGAAACTCTCAGTCTGTCCTGTAAGATATCTGGATATACCGTTTCCAGCCACCACACACACTGGATACGACAACCAGCAGGAAAATCTCTGGAGTGGATGGGTTATTCTGGATTAGGCCTAGGTTACCATGCTAAAACTTTTGAAGGACGTATGGAAACCACTAAAGATAACTCCAACAGCATGTTGACTCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCAGCGTATTACTGTGCAAGAGAGACACAGTGATGTGAGTGAGTGGAGGATCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84698589, "gff_end": 84698925, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04092", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV3-20*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV3-20*02", "sequence": "CAGACTGAGCTCACACAGCCAGGCTTTTTGACCCTGCAGCCTGGACAGCCTCTGACCCTCTCCTGTAAGGTCTCTGGGTATTCTTTAACCAGTACCAGCTACTGTACAGGTTGGGTACGACAGCCTGCAGGAAAAGCACTGGAGTGGGTTGGAAACATGTGTGGCAGTGGTAACATATACTACAGTGATAAGCTGAAAAACAAATTCAGTATCTCCAGAGACACTTCCAGCAGCACAGTGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTGTATATTATTGTGCTCGACGACCACAGTGATACAAACCAACACAGAACCTGTACAAAAACT", "coding_sequence": "CAGACTGAGCTCACACAGCCAGGCTTTTTGACCCTGCAGCCTGGACAGCCTCTGACCCTCTCCTGTAAGGTCTCTGGGTATTCTTTAACCAGTACCAGCTACTGTACAGGTTGGGTACGACAGCCTGCAGGAAAAGCACTGGAGTGGGTTGGAAACATGTGTGGCAGTGGTAACATATACTACAGTGATAAGCTGAAAAACAAATTCAGTATCTCCAGAGACACTTCCAGCAGCACAGTGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTGTATATTATTGTGCTCGACGAC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "20", "subgroup_designation": "3", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 301, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 302, "v_rs_end": 340, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGACTGAGCTCACACAGCCAGGCTTTTTGACCCTGCAGCCTGGACAGCCTCTGACCCTCTCCTGTAAGGTCTCTGGGTATTCTTTAACCAGTACCAGCTACTGTACAGGTTGGGTACGACAGCCTGCAGGAAAAGCACTGGAGTGGGTTGGAAACATGTGTGGCAGTGGTAACATATACTACAGTGATAAGCTGAAAAACAAATTCAGTATCTCCAGAGACACTTCCAGCAGCACAGTGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTGTATATTATTGTGCTCGACGAC", "aligned_sequence": "CAGACTGAGCTCACACAG......CCAGGCTTT...TTGACCCTGCAGCCTGGACAGCCTCTGACCCTC...TCCTGTAAGGTCTCTGGGTATTCTTTAACC......AGTACCAGCTACTGTACAGGTTGGGTACGACAGCCTGCAGGAAAAGCACTGGAGTGGGTTGGAAACATGTGTGGCAGT.........GGTAACATATACTACAGTGATAAGCTGAAA...AACAAATTCAGTATCTCCAGAGACACTTCCAGCAGCACAGTGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTGTATATTATTGTGCTCGACGAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2905", "sequence": "CAGACTGAGCTCACACAGCCAGGCTTTTTGACCCTGCAGCCTGGACAGCCTCTGACCCTCTCCTGTAAGGTCTCTGGGTATTCTTTAACCAGTACCAGCTACTGTACAGGTTGGGTACGACAGCCTGCAGGAAAAGCACTGGAGTGGGTTGGAAACATGTGTGGCAGTGGTAACATATACTACAGTGATAAGCTGAAAAACAAATTCAGTATCTCCAGAGACACTTCCAGCAGCACAGTGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTGTATATTATTGTGCTCGACGACCACAGTGATACAAACCAACACAGAACCTGTACAAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51881676, "gff_end": 51882015, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04095", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4D-60*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4D-60*02", "sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAGACTACTATATGACCTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGGCTACTCAGAGTCCCTGAAAGGCCAGTTCAGCCTGACTGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGACAGGCACACTGACTGAAGCTGTTGAAGCAGCTGTACAAAAACA", "coding_sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAGACTACTATATGACCTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGGCTACTCAGAGTCCCTGAAAGGCCAGTTCAGCCTGACTGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGACAGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": "Genomic only", "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "22", "subgroup_designation": "4", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 301, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 302, "v_rs_end": 340, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAGACTACTATATGACCTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGGCTACTCAGAGTCCCTGAAAGGCCAGTTCAGCCTGACTGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGACAGG", "aligned_sequence": "TGTGATGAGATGGATCAG......TCTCCTTCT...CAGGTGAAAAGACCTGGAGACAAGTTTAAATTG...TCATGTAAAATCTCTGGGTTTGATATG............ACAGACTACTATATGACCTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCA...ACAGATGCTCCAGGCTACTCAGAGTCCCTGAAA...GGCCAGTTCAGCCTGACTGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGACAGG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2908", "sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAGACTACTATATGACCTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGGCTACTCAGAGTCCCTGAAAGGCCAGTTCAGCCTGACTGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGACAGGCACACTGACTGAAGCTGTTGAAGCAGCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84468028, "gff_end": 84468367, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A04096", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4D-13*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4D-13*02", "sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGACGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACAGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGACACACTGATTGAAGCTGGTAAAGCAGCTGTATAAAACCC", "coding_sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGACGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACAGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "13", "subgroup_designation": "4D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGACGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACAGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "aligned_sequence": "GATATCAGACTGGATCAG......TCACATTCT...CATGTGTAAAGACGAGGAGATACTTTTAAATTG...TCATGTAAAATCTCTGAGTTTACAATG............GCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAA...ACAGATGTTCCAGACTACTCATACTAA.........GGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACAGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2909", "sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGACGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACAGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGACACACTGATTGAAGCTGGTAAAGCAGCTGTATAAAACCC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84578677, "gff_end": 84579010, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04093", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4-22*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4-22*02", "sequence": "GTTTTCAGTCTGGATCAGTCTCTTTCTCATGTGAAAAGACCTGAAGACACTGTTAAATTGTCATGTAAAACATCTGGGTTTACAATGACAAGCTTCTACTTGCACTGGATAAGGCAGAAACTAGGCAAAGCACTGGAGTGGATCGGGAGAATGAATAGCAATTCTCCAGACTACTCAGACTCCCTCAAAGGCCAGTTCACACTGACTGAGGACGGCTCCACAAGCACACAGTTCTTAGAGGCCGAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTGTTGCGCTTGAGAGACACACTGACTGAAGCTGGTGAATCATCTGTACTGAAACC", "coding_sequence": "GTTTTCAGTCTGGATCAGTCTCTTTCTCATGTGAAAAGACCTGAAGACACTGTTAAATTGTCATGTAAAACATCTGGGTTTACAATGACAAGCTTCTACTTGCACTGGATAAGGCAGAAACTAGGCAAAGCACTGGAGTGGATCGGGAGAATGAATAGCAATTCTCCAGACTACTCAGACTCCCTCAAAGGCCAGTTCACACTGACTGAGGACGGCTCCACAAGCACACAGTTCTTAGAGGCCGAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTGTTGCGCTTGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": "Genomic only", "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "23", "subgroup_designation": "4D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GTTTTCAGTCTGGATCAGTCTCTTTCTCATGTGAAAAGACCTGAAGACACTGTTAAATTGTCATGTAAAACATCTGGGTTTACAATGACAAGCTTCTACTTGCACTGGATAAGGCAGAAACTAGGCAAAGCACTGGAGTGGATCGGGAGAATGAATAGCAATTCTCCAGACTACTCAGACTCCCTCAAAGGCCAGTTCACACTGACTGAGGACGGCTCCACAAGCACACAGTTCTTAGAGGCCGAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTGTTGCGCTTGAGAGA", "aligned_sequence": "GTTTTCAGTCTGGATCAG......TCTCTTTCT...CATGTGAAAAGACCTGAAGACACTGTTAAATTG...TCATGTAAAACATCTGGGTTTACAATG............ACAAGCTTCTACTTGCACTGGATAAGGCAGAAACTAGGCAAAGCACTGGAGTGGATCGGGAGAATGAATAGC............AATTCTCCAGACTACTCAGACTCCCTCAAA...GGCCAGTTCACACTGACTGAGGACGGCTCCACAAGCACACAGTTCTTAGAGGCCGAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTGTTGCGCTTGAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2906", "sequence": "GTTTTCAGTCTGGATCAGTCTCTTTCTCATGTGAAAAGACCTGAAGACACTGTTAAATTGTCATGTAAAACATCTGGGTTTACAATGACAAGCTTCTACTTGCACTGGATAAGGCAGAAACTAGGCAAAGCACTGGAGTGGATCGGGAGAATGAATAGCAATTCTCCAGACTACTCAGACTCCCTCAAAGGCCAGTTCACACTGACTGAGGACGGCTCCACAAGCACACAGTTCTTAGAGGCCGAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTGTTGCGCTTGAGAGACACACTGACTGAAGCTGGTGAATCATCTGTACTGAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51868219, "gff_end": 51868549, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A04094", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4D-23*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4D-23*02", "sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAAACTATTACATGCACTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGTCTACTCAGACTCCCTGAAAGGCCAGTTCACCCTGACCGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGAGAGACACACTGACTGAAGCTGTTGAAGCAGCTGTACAAAAACA", "coding_sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAAACTATTACATGCACTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGTCTACTCAGACTCCCTGAAAGGCCAGTTCACCCTGACCGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": "Genomic only", "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "60", "subgroup_designation": "4D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 301, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 302, "v_rs_end": 340, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAAACTATTACATGCACTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGTCTACTCAGACTCCCTGAAAGGCCAGTTCACCCTGACCGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGAGAGA", "aligned_sequence": "TGTGATGAGATGGATCAG......TCTCCTTCT...CAGGTGAAAAGACCTGGAGACAAGTTTAAATTG...TCATGTAAAATCTCTGGGTTTGATATG............ACAAACTATTACATGCACTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCA...ACAGATGCTCCAGTCTACTCAGACTCCCTGAAA...GGCCAGTTCACCCTGACCGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2907", "sequence": "TGTGATGAGATGGATCAGTCTCCTTCTCAGGTGAAAAGACCTGGAGACAAGTTTAAATTGTCATGTAAAATCTCTGGGTTTGATATGACAAACTATTACATGCACTGGATAAGACAGAAACCAGGCAAAGCTCTGGAGTGGATTGGGGTTATTAACTCTGGTTCAACAGATGCTCCAGTCTACTCAGACTCCCTGAAAGGCCAGTTCACCCTGACCGAGGACGTCTCTACAAGCACACAGTTCTTAGAGGCCAAGAGTCTGAGTTCAGAGGACTCTGCTGTTTATTATTGTGCTCGAGAGACACACTGACTGAAGCTGTTGAAGCAGCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84538661, "gff_end": 84539000, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A04097", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4D-72*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4D-72*02", "sequence": "AACATCAGGCAGGATCAGTCTCCTCCTCAAGTGAAAAGACCTGGAGACACTGTTAAATTGTCCTGTAAAATCTCTGCTTTCTCAATGAGCGGCTACTGGATACATTGGATGAGGCAGAAGTGAGGCAAAGCCCTGGAGTGGATCAGGAGAATGAATAGCAATTCTACAATCTACACAAACTCCCTGAAAGGAGTGTTTGTCCTGACTGAGGACGTCTCCACAAGCACACAGTTTTTAGAGGCCAAGAGTCTGAGAGCAGACACTGCTGTTTATTATTGTGCTCGAGAGACACACTGATTGGAGCTGGTGAAGCAGCTGCATAAAACTC", "coding_sequence": "AACATCAGGCAGGATCAGTCTCCTCCTCAAGTGAAAAGACCTGGAGACACTGTTAAATTGTCCTGTAAAATCTCTGCTTTCTCAATGAGCGGCTACTGGATACATTGGATGAGGCAGAAGTGAGGCAAAGCCCTGGAGTGGATCAGGAGAATGAATAGCAATTCTACAATCTACACAAACTCCCTGAAAGGAGTGTTTGTCCTGACTGAGGACGTCTCCACAAGCACACAGTTTTTAGAGGCCAAGAGTCTGAGAGCAGACACTGCTGTTTATTATTGTGCTCGAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "72", "subgroup_designation": "4D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 290, "v_rs_end": 328, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AACATCAGGCAGGATCAGTCTCCTCCTCAAGTGAAAAGACCTGGAGACACTGTTAAATTGTCCTGTAAAATCTCTGCTTTCTCAATGAGCGGCTACTGGATACATTGGATGAGGCAGAAGTGAGGCAAAGCCCTGGAGTGGATCAGGAGAATGAATAGCAATTCTACAATCTACACAAACTCCCTGAAAGGAGTGTTTGTCCTGACTGAGGACGTCTCCACAAGCACACAGTTTTTAGAGGCCAAGAGTCTGAGAGCAGACACTGCTGTTTATTATTGTGCTCGAGAGA", "aligned_sequence": "AACATCAGGCAGGATCAG......TCTCCTCCT...CAAGTGAAAAGACCTGGAGACACTGTTAAATTG...TCCTGTAAAATCTCTGCTTTCTCAATG............AGCGGCTACTGGATACATTGGATGAGGCAGAAGTGAGGCAAAGCCCTGGAGTGGATCAGGAGAATGAATAGC............AATTCTACAATCTACACAAACTCCCTGAAA...GGAGTGTTTGTCCTGACTGAGGACGTCTCCACAAGCACACAGTTTTTAGAGGCCAAGAGTCTGAGAGCA...GACACTGCTGTTTATTATTGTGCTCGAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2910", "sequence": "AACATCAGGCAGGATCAGTCTCCTCCTCAAGTGAAAAGACCTGGAGACACTGTTAAATTGTCCTGTAAAATCTCTGCTTTCTCAATGAGCGGCTACTGGATACATTGGATGAGGCAGAAGTGAGGCAAAGCCCTGGAGTGGATCAGGAGAATGAATAGCAATTCTACAATCTACACAAACTCCCTGAAAGGAGTGTTTGTCCTGACTGAGGACGTCTCCACAAGCACACAGTTTTTAGAGGCCAAGAGTCTGAGAGCAGACACTGCTGTTTATTATTGTGCTCGAGAGACACACTGATTGGAGCTGGTGAAGCAGCTGCATAAAACTC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84402771, "gff_end": 84403098, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04098", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV4D-8-4*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV4D-8-4*01", "sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGATGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACGGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGACACACTGATTGAAGCTGGGAAAGCAGCTGTATAAAACCC", "coding_sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGATGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACGGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-4", "subgroup_designation": "4D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGATGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACGGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "aligned_sequence": "GATATCAGACTGGATCAG......TCACATTCT...CATGTGTAAAGATGAGGAGATACTTTTAAATTG...TCATGTAAAATCTCTGAGTTTACAATG............GCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAA...ACAGATGTTCCAGACTACTCATACTAA.........GGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACGGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2911", "sequence": "GATATCAGACTGGATCAGTCACATTCTCATGTGTAAAGATGAGGAGATACTTTTAAATTGTCATGTAAAATCTCTGAGTTTACAATGGCAAGGTTCTTCATGCACTGCATGAGGCAGAAACCAGGCAAAACTCTGAAGTGGATTGGGAGCGTTGACTCTGGTTAAACAGATGTTCCAGACTACTCATACTAAGGATAGTTCACCCTGAATGAGGACGTGTCCACAAGCACACGGCGCTTTGAGGCCAAGAGTCTGAGATCAGAGGACTCTGCTGTTTATTATTGTGTTTGACAGACACACTGATTGAAGCTGGGAAAGCAGCTGTATAAAACCC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84677190, "gff_end": 84677523, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04103", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6-31*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6-31*01", "sequence": "AGTTATGAACTCACTCAGCCAGCCTCTTTGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTAGTAGCTACTACACGGCTTGGATTCGACAGCCTGCAGGGAAAACACTGGAGTGGATTGGATATATTAGTAGTGGTGGAGGCACAGCTTATAAAGATTCACTGAAAAACAAGTTCAGCATCACCAGAGACACGTCCAGCAACACATTGTTTTTAAAAGGACAGAGTCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGCCTCCACAGTGATACAAACCAGCAGCAGACCTGTAGTAAAACT", "coding_sequence": "AGTTATGAACTCACTCAGCCAGCCTCTTTGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTAGTAGCTACTACACGGCTTGGATTCGACAGCCTGCAGGGAAAACACTGGAGTGGATTGGATATATTAGTAGTGGTGGAGGCACAGCTTATAAAGATTCACTGAAAAACAAGTTCAGCATCACCAGAGACACGTCCAGCAACACATTGTTTTTAAAAGGACAGAGTCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGCCTC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "31", "subgroup_designation": "6", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 292, "v_rs_end": 330, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTTATGAACTCACTCAGCCAGCCTCTTTGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTAGTAGCTACTACACGGCTTGGATTCGACAGCCTGCAGGGAAAACACTGGAGTGGATTGGATATATTAGTAGTGGTGGAGGCACAGCTTATAAAGATTCACTGAAAAACAAGTTCAGCATCACCAGAGACACGTCCAGCAACACATTGTTTTTAAAAGGACAGAGTCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGCCTC", "aligned_sequence": "AGTTATGAACTCACTCAG......CCAGCCTCT...TTGACTGTCCAGCCAGGTCAACCACTGACCATC...TCCTGTAAGGTCTCATATTCAGTTAGT...............AGCTACTACACGGCTTGGATTCGACAGCCTGCAGGGAAAACACTGGAGTGGATTGGATATATTAGTAGTGGT.........GGAGGCACAGCTTATAAAGATTCACTGAAA...AACAAGTTCAGCATCACCAGAGACACGTCCAGCAACACATTGTTTTTAAAAGGACAGAGTCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGCCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2915", "sequence": "AGTTATGAACTCACTCAGCCAGCCTCTTTGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTAGTAGCTACTACACGGCTTGGATTCGACAGCCTGCAGGGAAAACACTGGAGTGGATTGGATATATTAGTAGTGGTGGAGGCACAGCTTATAAAGATTCACTGAAAAACAAGTTCAGCATCACCAGAGACACGTCCAGCAACACATTGTTTTTAAAAGGACAGAGTCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCTCGCCTCCACAGTGATACAAACCAGCAGCAGACCTGTAGTAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51765640, "gff_end": 51765969, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04099", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6-35*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6-35*02", "sequence": "AGTTATGAACTCACACAGCCAGCCTCTCTGACTGTCCAGCCAGGTCAACCAATGACCATCTCCTGTAAGGTCTCATATTCAGTTACTGGCTATTATACAGCTTGGATCCGACAGCCTGTAGGGAAACCACTGGAGTGGATTGGAAATGTATATTCTGGAGACACACAATACAAGGATTCTCTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATGTTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCTCACAGTGATACAAACCAGCACAAGAGCTGTACAAAAACC", "coding_sequence": "AGTTATGAACTCACACAGCCAGCCTCTCTGACTGTCCAGCCAGGTCAACCAATGACCATCTCCTGTAAGGTCTCATATTCAGTTACTGGCTATTATACAGCTTGGATCCGACAGCCTGTAGGGAAACCACTGGAGTGGATTGGAAATGTATATTCTGGAGACACACAATACAAGGATTCTCTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATGTTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "35", "subgroup_designation": "6", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 289, "v_rs_end": 327, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTTATGAACTCACACAGCCAGCCTCTCTGACTGTCCAGCCAGGTCAACCAATGACCATCTCCTGTAAGGTCTCATATTCAGTTACTGGCTATTATACAGCTTGGATCCGACAGCCTGTAGGGAAACCACTGGAGTGGATTGGAAATGTATATTCTGGAGACACACAATACAAGGATTCTCTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATGTTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "aligned_sequence": "AGTTATGAACTCACACAG......CCAGCCTCT...CTGACTGTCCAGCCAGGTCAACCAATGACCATC...TCCTGTAAGGTCTCATATTCAGTTACT...............GGCTATTATACAGCTTGGATCCGACAGCCTGTAGGGAAACCACTGGAGTGGATTGGAAATGTATATTCT............GGAGACACACAATACAAGGATTCTCTGAAG...AACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATGTTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2912", "sequence": "AGTTATGAACTCACACAGCCAGCCTCTCTGACTGTCCAGCCAGGTCAACCAATGACCATCTCCTGTAAGGTCTCATATTCAGTTACTGGCTATTATACAGCTTGGATCCGACAGCCTGTAGGGAAACCACTGGAGTGGATTGGAAATGTATATTCTGGAGACACACAATACAAGGATTCTCTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATGTTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCTCACAGTGATACAAACCAGCACAAGAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51745777, "gff_end": 51746103, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04100", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6-4*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6-4*02", "sequence": "TGTGAAGAACTCACTCAGCCAGCCTCTATGACTGTCCAGTCAGGTCAACCACTGACCATCTCTTGTAAGGTTTCATATTCTGTAGGTAGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACTGGAGGAACGCACCACAAAGACTCCCTGAAAAATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGCTCGCCTCCACAGTGATACAAACCACCACCAGACCTATACTAAAACT", "coding_sequence": "TGTGAAGAACTCACTCAGCCAGCCTCTATGACTGTCCAGTCAGGTCAACCACTGACCATCTCTTGTAAGGTTTCATATTCTGTAGGTAGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACTGGAGGAACGCACCACAAAGACTCCCTGAAAAATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGCTCGCCTC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "4", "subgroup_designation": "6", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 289, "v_rs_end": 327, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGTGAAGAACTCACTCAGCCAGCCTCTATGACTGTCCAGTCAGGTCAACCACTGACCATCTCTTGTAAGGTTTCATATTCTGTAGGTAGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACTGGAGGAACGCACCACAAAGACTCCCTGAAAAATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGCTCGCCTC", "aligned_sequence": "TGTGAAGAACTCACTCAG......CCAGCCTCT...ATGACTGTCCAGTCAGGTCAACCACTGACCATC...TCTTGTAAGGTTTCATATTCTGTAGGT...............AGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACT............GGAGGAACGCACCACAAAGACTCCCTGAAA...AATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGCTCGCCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2872", "sequence": "TGTGAAGAACTCACTCAGCCAGCCTCTATGACTGTCCAGTCAGGTCAACCACTGACCATCTCTTGTAAGGTTTCATATTCTGTAGGTAGCTATTACACAGCTTGGATCCGGCAGCCTGCAGGGAAAACACTGGAGTGGATTGGAATGAAATATACTGGAGGAACGCACCACAAAGACTCCCTGAAAAATAAGTTCAGCCTCACAGTAGACTCCTCCAGCAATACTGTGACTTTAACAGGACAGAGTCTGCAGACTGAGGACACAGCTGTGTATTATTGTGCTCGCCTCCACAGTGATACAAACCACCACCAGACCTATACTAAAACT", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52010644, "gff_end": 52010970, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04104", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6D-27*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6D-27*02", "sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAAGGAAAGGACTGGAGTGGACTGGGCAATATTATACTGGAAACACAGTCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCAATTTAGACTCATCTTTAACAGGACAGAACCTGCAGACTAAAGACACAGCTGTGTATTATTGTGCCAGAGACTCACTGTGATATAAACCAGGGATGAACATGTAAAAAACAC", "coding_sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAAGGAAAGGACTGGAGTGGACTGGGCAATATTATACTGGAAACACAGTCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCAATTTAGACTCATCTTTAACAGGACAGAACCTGCAGACTAAAGACACAGCTGTGTATTATTGTGCCAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "27", "subgroup_designation": "6D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 274, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 275, "v_rs_end": 313, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAAGGAAAGGACTGGAGTGGACTGGGCAATATTATACTGGAAACACAGTCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCAATTTAGACTCATCTTTAACAGGACAGAACCTGCAGACTAAAGACACAGCTGTGTATTATTGTGCCAGAGACT", "aligned_sequence": "TGTGAAGAACTCACTCAG......CCAGCATCT...ATGACTGTCCAGCCAGGTCAACCACTGACCATC...TCCTGTAAGGTCTCATATTCTGTTACT...............AGCTATTGGACAGCTTGGATCCGACAACCTGCAAGGAAAGGACTGGAGTGGACTGGGCAATATTATACT............GGAAACACAGTCTACAAGGATTCACTGAAA...AACAAGTTCAGCCTCAATTTAGACTCATCT...............TTAACAGGACAGAACCTGCAGACTAAAGACACAGCTGTGTATTATTGTGCCAGAGACT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2916", "sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAAGGAAAGGACTGGAGTGGACTGGGCAATATTATACTGGAAACACAGTCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCAATTTAGACTCATCTTTAACAGGACAGAACCTGCAGACTAAAGACACAGCTGTGTATTATTGTGCCAGAGACTCACTGTGATATAAACCAGGGATGAACATGTAAAAAACAC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84517935, "gff_end": 84518247, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04101", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6D-5*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6D-5*02", "sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAGGGAAAGGACTGGAGTGGATTGGGCAAATATGTACTGGAAACACAATCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCACTTTAGACTCCTCTAACAAGATAGTGACTTTAACAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGAGACTCACAGTGATACAAACCAGGGACAGACATGCACAAACACT", "coding_sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAGGGAAAGGACTGGAGTGGATTGGGCAAATATGTACTGGAAACACAATCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCACTTTAGACTCCTCTAACAAGATAGTGACTTTAACAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "5", "subgroup_designation": "6D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 290, "v_rs_end": 328, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAGGGAAAGGACTGGAGTGGATTGGGCAAATATGTACTGGAAACACAATCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCACTTTAGACTCCTCTAACAAGATAGTGACTTTAACAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGAGACT", "aligned_sequence": "TGTGAAGAACTCACTCAG......CCAGCATCT...ATGACTGTCCAGCCAGGTCAACCACTGACCATC...TCCTGTAAGGTCTCATATTCTGTTACT...............AGCTATTGGACAGCTTGGATCCGACAACCTGCAGGGAAAGGACTGGAGTGGATTGGGCAAATATGTACT............GGAAACACAATCTACAAGGATTCACTGAAA...AACAAGTTCAGCCTCACTTTAGACTCCTCTAACAAGATAGTGACTTTAACAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGAGACT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2913", "sequence": "TGTGAAGAACTCACTCAGCCAGCATCTATGACTGTCCAGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCTGTTACTAGCTATTGGACAGCTTGGATCCGACAACCTGCAGGGAAAGGACTGGAGTGGATTGGGCAAATATGTACTGGAAACACAATCTACAAGGATTCACTGAAAAACAAGTTCAGCCTCACTTTAGACTCCTCTAACAAGATAGTGACTTTAACAGGACAGAACCTGCAGACTGAAGACACAGCTGTGTATTATTGTGCCCGAGACTCACAGTGATACAAACCAGGGACAGACATGCACAAACACT", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84723344, "gff_end": 84723671, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04105", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6D-64*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6D-64*02", "sequence": "AATTATGAACTCAATCAGCCAGCCTCTATGACTGTCCAGCCAGGTCAACCACTGACCATCCCCTGTAAGATCTCATATTCTGTTATTAGCTATTATACAGCTTGGACTTGACAGCCTGCAGGGAAAGGACTGGAGTGGATTGGAAATGTATATTCTGGAGACACATAATACAATAATTTACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCCAGCAGTAATACTGTGTTTTTAAAAAGGAGCAACTTCCAGACTGAAGACACAGTTGTGCATTATTGTGCCTACACTCACAGTGATACAAACCAGCACCAGAGCTGTATAAAAATC", "coding_sequence": "AATTATGAACTCAATCAGCCAGCCTCTATGACTGTCCAGCCAGGTCAACCACTGACCATCCCCTGTAAGATCTCATATTCTGTTATTAGCTATTATACAGCTTGGACTTGACAGCCTGCAGGGAAAGGACTGGAGTGGATTGGAAATGTATATTCTGGAGACACATAATACAATAATTTACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCCAGCAGTAATACTGTGTTTTTAAAAAGGAGCAACTTCCAGACTGAAGACACAGTTGTGCATTATTGTGCCTACACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "64", "subgroup_designation": "6D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 289, "v_rs_end": 327, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AATTATGAACTCAATCAGCCAGCCTCTATGACTGTCCAGCCAGGTCAACCACTGACCATCCCCTGTAAGATCTCATATTCTGTTATTAGCTATTATACAGCTTGGACTTGACAGCCTGCAGGGAAAGGACTGGAGTGGATTGGAAATGTATATTCTGGAGACACATAATACAATAATTTACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCCAGCAGTAATACTGTGTTTTTAAAAAGGAGCAACTTCCAGACTGAAGACACAGTTGTGCATTATTGTGCCTACACT", "aligned_sequence": "AATTATGAACTCAATCAG......CCAGCCTCT...ATGACTGTCCAGCCAGGTCAACCACTGACCATC...CCCTGTAAGATCTCATATTCTGTTATT...............AGCTATTATACAGCTTGGACTTGACAGCCTGCAGGGAAAGGACTGGAGTGGATTGGAAATGTATATTCT............GGAGACACATAATACAATAATTTACTGAAG...AACAAGTTCAGCCTCTCAGTAGACTCCAGCAGTAATACTGTGTTTTTAAAAAGGAGCAACTTCCAGACTGAAGACACAGTTGTGCATTATTGTGCCTACACT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2917", "sequence": "AATTATGAACTCAATCAGCCAGCCTCTATGACTGTCCAGCCAGGTCAACCACTGACCATCCCCTGTAAGATCTCATATTCTGTTATTAGCTATTATACAGCTTGGACTTGACAGCCTGCAGGGAAAGGACTGGAGTGGATTGGAAATGTATATTCTGGAGACACATAATACAATAATTTACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCCAGCAGTAATACTGTGTTTTTAAAAAGGAGCAACTTCCAGACTGAAGACACAGTTGTGCATTATTGTGCCTACACTCACAGTGATACAAACCAGCACCAGAGCTGTATAAAAATC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84453734, "gff_end": 84454060, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04102", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV6D-76*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV6D-76*02", "sequence": "AGTTATGAACTCTCTCAGCCAGCATCTATGACTGTCCTGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTACTAACACTTGGACAGCTTGGATCCGAAAGCCTGCAGGGAAAACACTGGAGTGGATTGGAAATGTATATTCTGGAGACACAGAACACAAGGATTCACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATACTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCTCACAGTGATACAAACCAGCACAAGAGCTGTACAAAAACC", "coding_sequence": "AGTTATGAACTCTCTCAGCCAGCATCTATGACTGTCCTGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTACTAACACTTGGACAGCTTGGATCCGAAAGCCTGCAGGGAAAACACTGGAGTGGATTGGAAATGTATATTCTGGAGACACAGAACACAAGGATTCACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATACTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "76", "subgroup_designation": "6D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 289, "v_rs_end": 327, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTTATGAACTCTCTCAGCCAGCATCTATGACTGTCCTGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTACTAACACTTGGACAGCTTGGATCCGAAAGCCTGCAGGGAAAACACTGGAGTGGATTGGAAATGTATATTCTGGAGACACAGAACACAAGGATTCACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATACTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "aligned_sequence": "AGTTATGAACTCTCTCAG......CCAGCATCT...ATGACTGTCCTGCCAGGTCAACCACTGACCATC...TCCTGTAAGGTCTCATATTCAGTTACT...............AACACTTGGACAGCTTGGATCCGAAAGCCTGCAGGGAAAACACTGGAGTGGATTGGAAATGTATATTCT............GGAGACACAGAACACAAGGATTCACTGAAG...AACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATACTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2914", "sequence": "AGTTATGAACTCTCTCAGCCAGCATCTATGACTGTCCTGCCAGGTCAACCACTGACCATCTCCTGTAAGGTCTCATATTCAGTTACTAACACTTGGACAGCTTGGATCCGAAAGCCTGCAGGGAAAACACTGGAGTGGATTGGAAATGTATATTCTGGAGACACAGAACACAAGGATTCACTGAAGAACAAGTTCAGCCTCTCAGTAGACTCTAGCAGTAATACTGTGTTTTTAAAAGGGCAGAACCTTCAGACTGAAGACTCAGCTGTGTATTATTGTGCCTACCCTCACAGTGATACAAACCAGCACAAGAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84386457, "gff_end": 84386783, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04106", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV7D-17-1*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV7D-17-1*02", "sequence": "GGTCTTGAACTCAGCCAGCCAAATGTAATGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTTGGGTTCGAAAGCCTGCAGGGAAAGCAATGGAGTGGATTTCCCATATATGGGATAATGGAGACATATACAAAAATGATGCATTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGAAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCTCCACAGTGATACAAACCAGCACCAGACCTGAACAAATACC", "coding_sequence": "GGTCTTGAACTCAGCCAGCCAAATGTAATGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTTGGGTTCGAAAGCCTGCAGGGAAAGCAATGGAGTGGATTTCCCATATATGGGATAATGGAGACATATACAAAAATGATGCATTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGAAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCTC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "17-1", "subgroup_designation": "7D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 310, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 311, "v_rs_end": 349, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCTTGAACTCAGCCAGCCAAATGTAATGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTTGGGTTCGAAAGCCTGCAGGGAAAGCAATGGAGTGGATTTCCCATATATGGGATAATGGAGACATATACAAAAATGATGCATTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGAAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCTC", "aligned_sequence": "GGTCTTGAACTCAGCCAG......CCAAATGTA...ATGGTTGTAAAGCCTGGAGAGTCTCTGAGCATC...ACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTTGGGTTCGAAAGCCTGCAGGGAAAGCAATGGAGTGGATTTCCCATATATGGGATAAT.........GGAGACATATACAAAAATGATGCATTGAAA...AACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGAAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 297, "cdr3_start": 298, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2918", "sequence": "GGTCTTGAACTCAGCCAGCCAAATGTAATGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTTGGGTTCGAAAGCCTGCAGGGAAAGCAATGGAGTGGATTTCCCATATATGGGATAATGGAGACATATACAAAAATGATGCATTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGAAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGCTCGCTACCCTCCACAGTGATACAAACCAGCACCAGACCTGAACAAATACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84549815, "gff_end": 84550163, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04107", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV7D-23-1*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV7D-23-1*02", "sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGGATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCACCACAGTGATACGAACCAATACCAGACCTGAACAATTACC", "coding_sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGGATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "23-1", "subgroup_designation": "7D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 307, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 308, "v_rs_end": 346, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGGATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "aligned_sequence": "GGTCTTGAACTCAGCCAG......CCAAGTTTA...TTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATC...ACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGGATGAT.........GGAGATATCTACAAAACTGATTCACTGAAA...AACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAA...CAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2919", "sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGGATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCACCACAGTGATACGAACCAATACCAGACCTGAACAATTACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84537670, "gff_end": 84538015, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04108", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV7D-61*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV7D-61*02", "sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGAATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCACCACAGTGATACGAACCAATACCAGACCTGAACAATTACC", "coding_sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGAATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "61", "subgroup_designation": "7D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 307, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 308, "v_rs_end": 346, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGAATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "aligned_sequence": "GGTCTTGAACTCAGCCAG......CCAAGTTTA...TTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATC...ACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGAATGAT.........GGAGATATCTACAAAACTGATTCACTGAAA...AACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAA...CAAGACACAGCTGTGTATTACTGTGTTCGCTACCCAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2920", "sequence": "GGTCTTGAACTCAGCCAGCCAAGTTTATTGGTTGTAAAGCCTGGAGAGTCTCTGAGCATCACCTGTAAGGTCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCTTTGCCACAGGTCGGGTTCGAAAGCCTGCAGGGAAAGCAATAGAGTGGATTTCCCATATATGGAATGATGGAGATATCTACAAAACTGATTCACTGAAAAACATGTTCAGCATTTCAAGAGATGCCTCCTGTAACTCTGTGTCTTTTAAAAGCCAGAGCCTGCAACAAGACACAGCTGTGTATTACTGTGTTCGCTACCCACCACAGTGATACGAACCAATACCAGACCTGAACAATTACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84467035, "gff_end": 84467380, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04109", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV7D-8-8*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV7D-8-8*01", "sequence": "GGTATTGAACTCAGCCAGCCAAGTGTAATGGTTGTAAAGCTTGGAGAGTCTCCAAGCATCACCTGTAAGATCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCCTTACCACAGGTTGGGTTTGAAAGCCTGCAGGGAAGGCAATGGAGTGGATTTCACATATATGGGATGATGGAGATATCTACAAAAATGATGCACTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGCAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGTTCGCTACCCTCCACAGTGATACAAACCAGCACCAGACCTGAACAAATACC", "coding_sequence": "GGTATTGAACTCAGCCAGCCAAGTGTAATGGTTGTAAAGCTTGGAGAGTCTCCAAGCATCACCTGTAAGATCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCCTTACCACAGGTTGGGTTTGAAAGCCTGCAGGGAAGGCAATGGAGTGGATTTCACATATATGGGATGATGGAGATATCTACAAAAATGATGCACTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGCAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGTTCGCTACCCTC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "8-8", "subgroup_designation": "7D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 310, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 311, "v_rs_end": 349, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGTATTGAACTCAGCCAGCCAAGTGTAATGGTTGTAAAGCTTGGAGAGTCTCCAAGCATCACCTGTAAGATCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCCTTACCACAGGTTGGGTTTGAAAGCCTGCAGGGAAGGCAATGGAGTGGATTTCACATATATGGGATGATGGAGATATCTACAAAAATGATGCACTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGCAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGTTCGCTACCCTC", "aligned_sequence": "GGTATTGAACTCAGCCAG......CCAAGTGTA...ATGGTTGTAAAGCTTGGAGAGTCTCCAAGCATC...ACCTGTAAGATCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCCTTACCACAGGTTGGGTTTGAAAGCCTGCAGGGAAGGCAATGGAGTGGATTTCACATATATGGGATGAT.........GGAGATATCTACAAAAATGATGCACTGAAA...AACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGCAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGTTCGCTACCCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 183, "fwr3_start": 184, "fwr3_end": 297, "cdr3_start": 298, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2921", "sequence": "GGTATTGAACTCAGCCAGCCAAGTGTAATGGTTGTAAAGCTTGGAGAGTCTCCAAGCATCACCTGTAAGATCTCTGGGTATTCTGTTAGTGATAGCAGCATAAGCCTTACCACAGGTTGGGTTTGAAAGCCTGCAGGGAAGGCAATGGAGTGGATTTCACATATATGGGATGATGGAGATATCTACAAAAATGATGCACTGAAAAACAAGTTCAGCATTTCAAGAGATGCCTCCAGCAACTCTGTGTCTTTACAAGGGCAGAGCCTGCAACCTGAAGACACAGCTGTGTATTACTGTGTTCGCTACCCTCCACAGTGATACAAACCAGCACCAGACCTGAACAAATACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84626670, "gff_end": 84627018, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04115", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-11*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-11*02", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTAAGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATTGTTTACTATTATTCTGACAGTGACAAGAGCAATGCCCAGGTAGTACAGAGTAGATTCACAGCGTTGAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGTTGTACAAAAACC", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTAAGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATTGTTTACTATTATTCTGACAGTGACAAGAGCAATGCCCAGGTAGTACAGAGTAGATTCACAGCGTTGAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "11", "subgroup_designation": "8", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTAAGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATTGTTTACTATTATTCTGACAGTGACAAGAGCAATGCCCAGGTAGTACAGAGTAGATTCACAGCGTTGAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTA............AGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATTGTTTACTATTATTCTGAC.........AGTGACAAGAGCAATGCCCAGGTAGTACAG...AGTAGATTCACAGCGTTGAAGGAC......AGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 81, "cdr1_start": 82, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2926", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTAAGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATTGTTTACTATTATTCTGACAGTGACAAGAGCAATGCCCAGGTAGTACAGAGTAGATTCACAGCGTTGAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGTTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51953989, "gff_end": 51954322, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04114", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-19*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-19*02", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACCCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCAGTTACATGCACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTACTCTGATAGTAACAAGAGCAATGCCCCTGTAGTACAGGGTAGATTCACAGCGTTGAAGGACAGCACTAATTTCTATCTGCACATGAACCTGTTGAAGCCAGAGGACTCCGCAGTGTATTACTGTGCTAGAGACTCACTACGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACCCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCAGTTACATGCACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTACTCTGATAGTAACAAGAGCAATGCCCCTGTAGTACAGGGTAGATTCACAGCGTTGAAGGACAGCACTAATTTCTATCTGCACATGAACCTGTTGAAGCCAGAGGACTCCGCAGTGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "19", "subgroup_designation": "8", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACCCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCAGTTACATGCACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTACTCTGATAGTAACAAGAGCAATGCCCCTGTAGTACAGGGTAGATTCACAGCGTTGAAGGACAGCACTAATTTCTATCTGCACATGAACCTGTTGAAGCCAGAGGACTCCGCAGTGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGACCCCTGCAGGATCCCTCAAACTC...ACATGTGCCTGTAGTGGATTCACTCTA............AGCAGCAGTTACATGCACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTACTCTGAT.........AGTAACAAGAGCAATGCCCCTGTAGTACAG...GGTAGATTCACAGCGTTGAAGGAC......AGCACTAATTTCTATCTGCACATGAACCTGTTGAAGCCAGAGGACTCCGCAGTGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2925", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACCCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCAGTTACATGCACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTACTCTGATAGTAACAAGAGCAATGCCCCTGTAGTACAGGGTAGATTCACAGCGTTGAAGGACAGCACTAATTTCTATCTGCACATGAACCTGTTGAAGCCAGAGGACTCCGCAGTGTATTACTGTGCTAGAGACTCACTACGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51899167, "gff_end": 51899497, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04110", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-39-2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-39-2*01", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCCTGTAGTACAGGGCCGATTCACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACA", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCCTGTAGTACAGGGCCGATTCACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "39-2", "subgroup_designation": "8", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCCTGTAGTACAGGGCCGATTCACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTC...ACATGTGCCTGTAGTGGATTCACTCTA............AGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGAC.........AGTTACAAGAGCAATGCCCCTGTAGTACAG...GGCCGATTCACTGCATCAAAGGAC......AGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2922", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCCTGTAGTACAGGGCCGATTCACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51714085, "gff_end": 51714415, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04111", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-40*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-40*02", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGCCGATTTACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGCCGATTTACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "40", "subgroup_designation": "8", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGCCGATTTACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTC...ACATGTGCCTGTAGTGGATTCACTCTA............AGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGAC.........AGTTACAAGAGCAATGCCCAGGTAGTACAG...GGCCGATTTACTGCATCAAAGGAC......AGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2923", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGCCGATTTACTGCATCAAAGGACAGCAGTAATTTATATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51694360, "gff_end": 51694690, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04112", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-46*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-46*01", "sequence": "CAGATCGTACTCACACAGGCTGAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTACAGGGTCGATTCACTGCATCAAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "coding_sequence": "CAGATCGTACTCACACAGGCTGAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTACAGGGTCGATTCACTGCATCAAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "46", "subgroup_designation": "8", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 290, "v_rs_end": 328, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCGTACTCACACAGGCTGAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTACAGGGTCGATTCACTGCATCAAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGATCGTACTCACACAG......GCTGAGTCA...GTCCAGGGGACTCCTGCAGGATCCCTCAAACTC...ACATGTGCCTGTAGTGGATTCACTCTA............AGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGAC.........AGTGACAAGAGCAATGCCCCTGTAGTACAG...GGTCGATTCACTGCATCAAAGGAC......AGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2924", "sequence": "CAGATCGTACTCACACAGGCTGAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTACAGGGTCGATTCACTGCATCAAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51652761, "gff_end": 51653088, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04116", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-47-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-47-3*01", "sequence": "CAGGTCATACTCACACAGGATGAGCAGTCAGTCCAGGGGACACCAAAACTGACATGTGCCTGTAGTGAATTTACTCTAAGCGGCACTAATATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTAATGGGCTGATTCACAGGATCGAAGGACAGCAGTAATTTCCATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAAACTCACTATGGTTAAACTAATGAGAATAGTGGGGACCGTCTG", "coding_sequence": "CAGGTCATACTCACACAGGATGAGCAGTCAGTCCAGGGGACACCAAAACTGACATGTGCCTGTAGTGAATTTACTCTAAGCGGCACTAATATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTAATGGGCTGATTCACAGGATCGAAGGACAGCAGTAATTTCCATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAAACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "47-3", "subgroup_designation": "8", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 280, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 281, "v_rs_end": 319, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCATACTCACACAGGATGAGCAGTCAGTCCAGGGGACACCAAAACTGACATGTGCCTGTAGTGAATTTACTCTAAGCGGCACTAATATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTAATGGGCTGATTCACAGGATCGAAGGACAGCAGTAATTTCCATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAAACT", "aligned_sequence": "CAGGTCATACTCACACAG......GATGAGCAGTCAGTCCAGGGGACACCA............AAACTG...ACATGTGCCTGTAGTGAATTTACTCTA............AGCGGCACTAATATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGAC.........AGTGACAAGAGCAATGCCCCTGTAGTAATG...GGCTGATTCACAGGATCGAAGGAC......AGCAGTAATTTCCATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAAACT", "fwr1_start": 1, "fwr1_end": 66, "cdr1_start": 67, "cdr1_end": 90, "fwr2_start": 91, "fwr2_end": 141, "cdr2_start": 142, "cdr2_end": 162, "fwr3_start": 163, "fwr3_end": 270, "cdr3_start": 271, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2927", "sequence": "CAGGTCATACTCACACAGGATGAGCAGTCAGTCCAGGGGACACCAAAACTGACATGTGCCTGTAGTGAATTTACTCTAAGCGGCACTAATATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATTATTCTGACAGTGACAAGAGCAATGCCCCTGTAGTAATGGGCTGATTCACAGGATCGAAGGACAGCAGTAATTTCCATCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAAACTCACTATGGTTAAACTAATGAGAATAGTGGGGACCGTCTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51630743, "gff_end": 51631061, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04113", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8-5*03.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8-5*03", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGAATCACTCTCAGCAGCTCTTATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATAATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGTCGATTCACTGCATCGAAGGACAGCACTAATTTCTATCTGCACATGAGCCAGTTGAAGTCAGAGGACTCTGCAATGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGAATCACTCTCAGCAGCTCTTATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATAATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGTCGATTCACTGCATCGAAGGACAGCACTAATTTCTATCTGCACATGAGCCAGTTGAAGTCAGAGGACTCTGCAATGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "5", "subgroup_designation": "8", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGAATCACTCTCAGCAGCTCTTATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATAATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGTCGATTCACTGCATCGAAGGACAGCACTAATTTCTATCTGCACATGAGCCAGTTGAAGTCAGAGGACTCTGCAATGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTC...ACATGTGCCTGTAGTGGAATCACTCTC............AGCAGCTCTTATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATAATTTACTATTATTCTGAC.........AGTTACAAGAGCAATGCCCAGGTAGTACAG...GGTCGATTCACTGCATCGAAGGAC......AGCACTAATTTCTATCTGCACATGAGCCAGTTGAAGTCAGAGGACTCTGCAATGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2873", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGAATCACTCTCAGCAGCTCTTATATGCACTGGATCCGCCAAGCACCTGGAAAAGGACTTGAATGGATAATTTACTATTATTCTGACAGTTACAAGAGCAATGCCCAGGTAGTACAGGGTCGATTCACTGCATCGAAGGACAGCACTAATTTCTATCTGCACATGAGCCAGTTGAAGTCAGAGGACTCTGCAATGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 52006744, "gff_end": 52007074, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04117", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8D-40-3*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8D-40-3*01", "sequence": "CAGGTCGTACTCACAAAGACTGAACAGTCAGTCCAGGGAAGCCCCGGGGGACTCCTCAAACTCACATGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATCATTCTGACGGGAGTAAGTGCAATGCCCCGGTAGTACAGGGCCGATTCACTGCATCGAAGGACAGCACTAATTTCTTTCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACTCACTATGGTTAAACAAATGAGAATAGCCGTACAAAAACC", "coding_sequence": "CAGGTCGTACTCACAAAGACTGAACAGTCAGTCCAGGGAAGCCCCGGGGGACTCCTCAAACTCACATGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATCATTCTGACGGGAGTAAGTGCAATGCCCCGGTAGTACAGGGCCGATTCACTGCATCGAAGGACAGCACTAATTTCTTTCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACT", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "40-3", "subgroup_designation": "8D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 293, "v_rs_end": 331, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACAAAGACTGAACAGTCAGTCCAGGGAAGCCCCGGGGGACTCCTCAAACTCACATGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATCATTCTGACGGGAGTAAGTGCAATGCCCCGGTAGTACAGGGCCGATTCACTGCATCGAAGGACAGCACTAATTTCTTTCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACT", "aligned_sequence": "CAGGTCGTACTCACAAAG......ACTGAACAGTCAGTCCAGGGAAGCCCCGGGGGACTCCTCAAACTC...ACATGTGCCTGTAGTGGATTTACTCTC............AGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATCATTCTGAC.........GGGAGTAAGTGCAATGCCCCGGTAGTACAG...GGCCGATTCACTGCATCGAAGGAC......AGCACTAATTTCTTTCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2928", "sequence": "CAGGTCGTACTCACAAAGACTGAACAGTCAGTCCAGGGAAGCCCCGGGGGACTCCTCAAACTCACATGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATCATTTACTATCATTCTGACGGGAGTAAGTGCAATGCCCCGGTAGTACAGGGCCGATTCACTGCATCGAAGGACAGCACTAATTTCTTTCTGCACATGAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACTCACTATGGTTAAACAAATGAGAATAGCCGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84479140, "gff_end": 84479470, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04118", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV8D-76-1*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV8D-76-1*01", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGACTCCTCAAATTCATTTGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATAATTTACTATCATTCTGACCGAAGTAAGAGCAATGCCCAGGTAGTACAGGGCCGATTCACTGCATCGAAGGACCGCACTAATTTCTTTCTGCACATAAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACTCACTATGGTTAAACAAATGAGAATAGCCGTACAAAACC", "coding_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGACTCCTCAAATTCATTTGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATAATTTACTATCATTCTGACCGAAGTAAGAGCAATGCCCAGGTAGTACAGGGCCGATTCACTGCATCGAAGGACCGCACTAATTTCTTTCTGCACATAAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGAC", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "76-1", "subgroup_designation": "8D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 292, "v_rs_end": 330, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGACTCCTCAAATTCATTTGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATAATTTACTATCATTCTGACCGAAGTAAGAGCAATGCCCAGGTAGTACAGGGCCGATTCACTGCATCGAAGGACCGCACTAATTTCTTTCTGCACATAAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGAC", "aligned_sequence": "CAGGTCGTACTCACACAG......GCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGACTCCTCAAATTC...ATTTGTGCCTGTAGTGGATTTACTCTC............AGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATAATTTACTATCATTCTGAC.........CGAAGTAAGAGCAATGCCCAGGTAGTACAG...GGCCGATTCACTGCATCGAAGGAC......CGCACTAATTTCTTTCTGCACATAAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGAC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2929", "sequence": "CAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGACTCCTCAAATTCATTTGTGCCTGTAGTGGATTTACTCTCAGCAGTACTTGAATGCACTGGATCCACCAGGCACCTGGAAAAGGACTTGAATGGATAATTTACTATCATTCTGACCGAAGTAAGAGCAATGCCCAGGTAGTACAGGGCCGATTCACTGCATCGAAGGACCGCACTAATTTCTTTCTGCACATAAGCCAGTTGAAGCCAGAGGACTCTGCATTGTATTACTGTGCTAGAGACTCACTATGGTTAAACAAATGAGAATAGCCGTACAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84385320, "gff_end": 84385649, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04119", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9-15*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9-15*02", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTCGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGGTAGCTACTACATGCACTGGATCCGTCAGAAACCAGGGAAAGGATTGGAGTGGATTGGATTCATTGACACTGGAACCACTGCTTATTATGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACACCTCCAAAAACCAGCTGTACTTAGAGATGAAAAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACACAGTGACACAGGAGGCTGCAGCACCGTACAAAAACTG", "coding_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTCGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGGTAGCTACTACATGCACTGGATCCGTCAGAAACCAGGGAAAGGATTGGAGTGGATTGGATTCATTGACACTGGAACCACTGCTTATTATGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACACCTCCAAAAACCAGCTGTACTTAGAGATGAAAAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "15", "subgroup_designation": "9", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTCGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGGTAGCTACTACATGCACTGGATCCGTCAGAAACCAGGGAAAGGATTGGAGTGGATTGGATTCATTGACACTGGAACCACTGCTTATTATGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACACCTCCAAAAACCAGCTGTACTTAGAGATGAAAAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "aligned_sequence": "GGGCAGTCACTCACCTCC......TCTGAGCCA...GTCGTGAAGAGACCTAGTGAGTCAGTAACACTG...TCCTGTACTGTGTCTGGATTCTCCATG............GGTAGCTACTACATGCACTGGATCCGTCAGAAACCAGGGAAAGGATTGGAGTGGATTGGATTCATTGACACTGGA.........ACCACTGCTTATTATGCCCAGTCTCTCCAG...GGCCAGTTCACCATCACCAAAGACACCTCCAAAAACCAGCTGTACTTAGAGATGAAAAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2874", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTCGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGGTAGCTACTACATGCACTGGATCCGTCAGAAACCAGGGAAAGGATTGGAGTGGATTGGATTCATTGACACTGGAACCACTGCTTATTATGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACACCTCCAAAAACCAGCTGTACTTAGAGATGAAAAGTCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACACAGTGACACAGGAGGCTGCAGCACCGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51929052, "gff_end": 51929385, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04120", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9-22-2*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9-22-2*01", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAAACCTGGAGAGTCAGTAATACTGTCATGTACTGTGTCTGGACTACCCCTGAGCTGGTTACACTGGATCCGTCAGAAACCTGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAAGGTCAGTTCACCATCACCAAAGACCGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGATCCTGCAGTTCCGTACAAAAACTG", "coding_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAAACCTGGAGAGTCAGTAATACTGTCATGTACTGTGTCTGGACTACCCCTGAGCTGGTTACACTGGATCCGTCAGAAACCTGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAAGGTCAGTTCACCATCACCAAAGACCGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "22-2", "subgroup_designation": "9", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 288, "v_rs_end": 326, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAAACCTGGAGAGTCAGTAATACTGTCATGTACTGTGTCTGGACTACCCCTGAGCTGGTTACACTGGATCCGTCAGAAACCTGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAAGGTCAGTTCACCATCACCAAAGACCGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGGCAGTCACTCACCTCC......TCTGAGCCA...GTAGTGAAGAAACCTGGAGAGTCAGTAATACTG...TCATGTACTGTGTCTGGACTACCC..................CTGAGCTGGTTACACTGGATCCGTCAGAAACCTGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGC.........ACTGGCACTATATTTGCCCAATCTCTACAA...GGTCAGTTCACCATCACCAAAGACCGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2930", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAAACCTGGAGAGTCAGTAATACTGTCATGTACTGTGTCTGGACTACCCCTGAGCTGGTTACACTGGATCCGTCAGAAACCTGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAAGGTCAGTTCACCATCACCAAAGACCGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACACAGGATCCTGCAGTTCCGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51864129, "gff_end": 51864454, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04121", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9-23*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9-23*02", "sequence": "GGACAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGCCCTGGAGAGTCAGTAACACTGTCATGTACTGTGTCTGGTTTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCTCAGTCCCTCCAGGGCCAGTTCACCATCACCAAAGACAACTCCAAAAACCAGTTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACACAGTGACAAAGGAGGCTGCAGCACCGTACAAAAACTG", "coding_sequence": "GGACAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGCCCTGGAGAGTCAGTAACACTGTCATGTACTGTGTCTGGTTTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCTCAGTCCCTCCAGGGCCAGTTCACCATCACCAAAGACAACTCCAAAAACCAGTTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "23", "subgroup_designation": "9", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 296, "v_rs_end": 334, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGACAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGCCCTGGAGAGTCAGTAACACTGTCATGTACTGTGTCTGGTTTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCTCAGTCCCTCCAGGGCCAGTTCACCATCACCAAAGACAACTCCAAAAACCAGTTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "aligned_sequence": "GGACAGTCACTCACCTCC......TCTGAGTCA...GTGGTGAAGAGCCCTGGAGAGTCAGTAACACTG...TCATGTACTGTGTCTGGTTTCTCCATG............GCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGC.........ACTGGCACTATATTTGCTCAGTCCCTCCAG...GGCCAGTTCACCATCACCAAAGACAACTCCAAAAACCAGTTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2931", "sequence": "GGACAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGCCCTGGAGAGTCAGTAACACTGTCATGTACTGTGTCTGGTTTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCTCAGTCCCTCCAGGGCCAGTTCACCATCACCAAAGACAACTCCAAAAACCAGTTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACACAGTGACAAAGGAGGCTGCAGCACCGTACAAAAACTG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51862832, "gff_end": 51863165, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04124", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9-34*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9-34*02", "sequence": "GGGCAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGACCTAGTGAGTTAGTAACAGTGTCCTGTACTGTGTCTGGTTTCTCTATGGGTAGCTACTACATGCACTGGATGCGTCAGAAACCAGGGAAAGAACTAGAGTGGATTGGACAAATTGATGGGGGCACTGGCACTATATTTGCCCAGTCCATCCAGGGCCAATTCACCATCACTAAAGACAGCTTCAAAAACCAGCTGTACTGAAATGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACTCAGTAGGCTACAGCGTCATACAAAAACTA", "coding_sequence": "GGGCAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGACCTAGTGAGTTAGTAACAGTGTCCTGTACTGTGTCTGGTTTCTCTATGGGTAGCTACTACATGCACTGGATGCGTCAGAAACCAGGGAAAGAACTAGAGTGGATTGGACAAATTGATGGGGGCACTGGCACTATATTTGCCCAGTCCATCCAGGGCCAATTCACCATCACTAAAGACAGCTTCAAAAACCAGCTGTACTGAAATGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "34", "subgroup_designation": "9", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 294, "v_rs_end": 332, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGGCAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGACCTAGTGAGTTAGTAACAGTGTCCTGTACTGTGTCTGGTTTCTCTATGGGTAGCTACTACATGCACTGGATGCGTCAGAAACCAGGGAAAGAACTAGAGTGGATTGGACAAATTGATGGGGGCACTGGCACTATATTTGCCCAGTCCATCCAGGGCCAATTCACCATCACTAAAGACAGCTTCAAAAACCAGCTGTACTGAAATGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGGCAGTCACTCACCTCC......TCTGAGTCA...GTGGTGAAGAGACCTAGTGAGTTAGTAACAGTG...TCCTGTACTGTGTCTGGTTTCTCTATG............GGTAGCTACTACATGCACTGGATGCGTCAGAAACCAGGGAAAGAACTAGAGTGGATTGGACAAATTGATGGGGGC.........ACTGGCACTATATTTGCCCAGTCCATCCAG...GGCCAATTCACCATCACTAAAGACAGCTTCAAAAACCAGCTGTACTGAAATGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2933", "sequence": "GGGCAGTCACTCACCTCCTCTGAGTCAGTGGTGAAGAGACCTAGTGAGTTAGTAACAGTGTCCTGTACTGTGTCTGGTTTCTCTATGGGTAGCTACTACATGCACTGGATGCGTCAGAAACCAGGGAAAGAACTAGAGTGGATTGGACAAATTGATGGGGGCACTGGCACTATATTTGCCCAGTCCATCCAGGGCCAATTCACCATCACTAAAGACAGCTTCAAAAACCAGCTGTACTGAAATGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACTCAGTAGGCTACAGCGTCATACAAAAACTA", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51755540, "gff_end": 51755871, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04122", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9-45*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9-45*02", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAGGGTCAGTTCACCATCACCAAAGACAGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGGCTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACAAAGAAGCTTGTATCGCCATACAAAAACGG", "coding_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAGGGTCAGTTCACCATCACCAAAGACAGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGGCTCTGCTGTTTATTATTGTGCCAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 13, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "45", "subgroup_designation": "9", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 294, "v_rs_end": 332, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAGGGTCAGTTCACCATCACCAAAGACAGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGGCTCTGCTGTTTATTATTGTGCCAGAGA", "aligned_sequence": "GGGCAGTCACTCACCTCC......TCTGAGCCA...GTAGTGAAGAGACCTAGTGAGTCAGTAACACTG...TCCTGTACTGTGTCTGGATTCTCCATG............GCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGC.........ACTGGCACTATATTTGCCCAATCTCTACAG...GGTCAGTTCACCATCACCAAAGACAGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGGCTCTGCTGTTTATTATTGTGCCAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2932", "sequence": "GGGCAGTCACTCACCTCCTCTGAGCCAGTAGTGAAGAGACCTAGTGAGTCAGTAACACTGTCCTGTACTGTGTCTGGATTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCTCATTGACAGTGGCACTGGCACTATATTTGCCCAATCTCTACAGGGTCAGTTCACCATCACCAAAGACAGCTCCAAAAACCAGCTGTACCTCGAGGTAAAAAGCCTGAAGACCAAAGGCTCTGCTGTTTATTATTGTGCCAGAGACACAGTGACAAAGAAGCTTGTATCGCCATACAAAAACGG", "repository_name": "GenBank", "repository_ref": "NC_048577", "patch_no": null, "gff_seqid": null, "gff_start": 51669169, "gff_end": 51669500, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A04123", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHV9D-2*02.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHV9D-2*02", "sequence": "GGGCAGTCACTCACTTCCTCTGAGCCAGTGGTGAAGAAACCTAGAGAGTCAGTAACACTGTCCTGTGCTGTCTCTGGCCTTTCTCTAAGCTATCTGCATTGGATCCGTCAGAAACCAGGGAAAGGACTTGAGTGGATTGGGCGCATTGACGGTGGCACTGGCACTGTATTTGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACGGCTCAAAAAACCAGCTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCTAGAGACACAGTGACACAGGAAGCTGAAGCGCCATACAAAAACGG", "coding_sequence": "GGGCAGTCACTCACTTCCTCTGAGCCAGTGGTGAAGAAACCTAGAGAGTCAGTAACACTGTCCTGTGCTGTCTCTGGCCTTTCTCTAAGCTATCTGCATTGGATCCGTCAGAAACCAGGGAAAGGACTTGAGTGGATTGGGCGCATTGACGGTGGCACTGGCACTGTATTTGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACGGCTCAAAAAACCAGCTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCTAGAGA", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": "2", "subgroup_designation": "9D", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": 288, "v_rs_end": 326, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GGGCAGTCACTCACTTCCTCTGAGCCAGTGGTGAAGAAACCTAGAGAGTCAGTAACACTGTCCTGTGCTGTCTCTGGCCTTTCTCTAAGCTATCTGCATTGGATCCGTCAGAAACCAGGGAAAGGACTTGAGTGGATTGGGCGCATTGACGGTGGCACTGGCACTGTATTTGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACGGCTCAAAAAACCAGCTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCTAGAGA", "aligned_sequence": "GGGCAGTCACTCACTTCC......TCTGAGCCA...GTGGTGAAGAAACCTAGAGAGTCAGTAACACTG...TCCTGTGCTGTCTCTGGCCTTTCT..................CTAAGCTATCTGCATTGGATCCGTCAGAAACCAGGGAAAGGACTTGAGTGGATTGGGCGCATTGACGGTGGC.........ACTGGCACTGTATTTGCCCAGTCTCTCCAG...GGCCAGTTCACCATCACCAAAGACGGCTCAAAAAACCAGCTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCTAGAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 165, "fwr3_start": 166, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "2875", "sequence": "GGGCAGTCACTCACTTCCTCTGAGCCAGTGGTGAAGAAACCTAGAGAGTCAGTAACACTGTCCTGTGCTGTCTCTGGCCTTTCTCTAAGCTATCTGCATTGGATCCGTCAGAAACCAGGGAAAGGACTTGAGTGGATTGGGCGCATTGACGGTGGCACTGGCACTGTATTTGCCCAGTCTCTCCAGGGCCAGTTCACCATCACCAAAGACGGCTCAAAAAACCAGCTGTACTTAGAGGTGAAAAGCCTGAAGACTGAAGACTCTGCTGTTTATTATTGTGCTAGAGACACAGTGACACAGGAAGCTGAAGCGCCATACAAAAACGG", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84750508, "gff_end": 84750833, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null }, { "allele_description_id": "OGRDB:A08755", "allele_description_ref": "OGRDB:Oncorhynchus mykiss/Arlee_IGH:IGHD2T2D*01.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Clareo Biosciences, Louisville, Kentucky, USA", "release_version": 1, "release_date": "20-Jun-2026", "release_description": "First version of the Oncorhynchus_mykiss_IGH_VDJ germline set.", "label": "IGHD2T2D*01", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATACTGGCTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "coding_sequence": "ATACTGGCTGGGGGG", "ext_3prime": null, "aliases": null, "locus": "IGH", "chromosome": 12, "sequence_type": "D", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:8022", "label": "Oncorhynchus mykiss" }, "species_subgroup": "Arlee", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": "2T2D", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 28, "gene_end": 43, "d_rs_3_prime_start": 44, "d_rs_3_prime_end": 71, "d_rs_5_prime_start": 1, "d_rs_5_prime_end": 27, "unrearranged_support": [ { "sequence_id": "5384", "sequence": "TGTTTTTGTGCTGGGGTATATCACTGTGATACTGGCTGGGGGGCACAGTGAAATGAGGCTGTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NC_048576", "patch_no": null, "gff_seqid": null, "gff_start": 84644531, "gff_end": 84644601, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\n", "curational_tags": null } ], "curation": null } ] }