{ "GermlineSet": [ { "germline_set_id": "OGRDB:G00053", "author": "William Lees", "lab_name": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "acknowledgements": null, "release_version": 2, "release_description": "The germline set is based on sequences published in Watson et al. (2019) ", "release_date": "2024-10-15", "germline_set_name": "PWD/PhJ IGH", "germline_set_ref": "OGRDB:PWD/PhJ IGH.2", "pub_ids": null, "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "locus": "IGH", "allele_descriptions": [ { "allele_description_id": "OGRDB:A02470", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-QP6K.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QP6K*00", "sequence": "GACGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGT", "coding_sequence": "GACGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-10" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGT", "aligned_sequence": "GACGTGAAGCTCGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACT......GGTGGTAGCACCTACTATCCAGACACTGTGAAG...GGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-10", "curational_tags": null }, { "allele_description_id": "OGRDB:A02414", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-F6YN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-F6YN*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACTGTCTACTTGGAGCTCAGTCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAAGG", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACTGTCTACTTGGAGCTCAGTCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAAGG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-15" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACTGTCTACTTGGAGCTCAGTCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAAGG", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTAGTGAAGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTC............ACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTAC......AATGATGATACTAAGTACAATGAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACTGTCTACTTGGAGCTCAGTCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAAGG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-15", "curational_tags": null }, { "allele_description_id": "OGRDB:A02430", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5UGX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5UGX*00", "sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCGGGCTACACATTTACCAGTTACAATATGCACTGGGTGAAGCAGACAACTGTGCATGGCCTGGAATGGATTGGAGCTATTCATCCTGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "coding_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCGGGCTACACATTTACCAGTTACAATATGCACTGGGTGAAGCAGACAACTGTGCATGGCCTGGAATGGATTGGAGCTATTCATCCTGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCGGGCTACACATTTACCAGTTACAATATGCACTGGGTGAAGCAGACAACTGTGCATGGCCTGGAATGGATTGGAGCTATTCATCCTGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "aligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCGGGCTACACATTT............ACCAGTTACAATATGCACTGGGTGAAGCAGACAACTGTGCATGGCCTGGAATGGATTGGAGCTATTCATCCTGGA......AGTGGTGGTACTGCCTACAATCAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02413", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-6SEN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-6SEN*00", "sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTCAAGCCTGGGGCTTCAGTGAAGATATCATGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGTACTCTGCAGTCTATTACTGTGCAA", "coding_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTCAAGCCTGGGGCTTCAGTGAAGATATCATGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGTACTCTGCAGTCTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-14" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTCAAGCCTGGGGCTTCAGTGAAGATATCATGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGTACTCTGCAGTCTATTACTGTGCAA", "aligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTCAAGCCTGGGGCTTCAGTGAAGATATCATGCAAGGCTTCTGGTTACTCATTC............ACTGGCTACTACATGCACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGC......ACTGGTGGTACTACCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGTACTCTGCAGTCTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-14", "curational_tags": null }, { "allele_description_id": "OGRDB:A02418", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-RN4F.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-RN4F*00", "sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "coding_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-19" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "aligned_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACTGAGTATATTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGA......AGTGGTAGTATAAAGTACAATGAGAAATTCAAG...GACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-19", "curational_tags": null }, { "allele_description_id": "OGRDB:A02416", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-S2UL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-S2UL*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGA", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-17" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGA", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTC............ACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGA......AGTGGTGGTACTAACTACAATGAGAAGTTCAAG...GGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGATGACTCTGCGGTCTATTTCTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-17", "curational_tags": null }, { "allele_description_id": "OGRDB:A02428", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-G2GM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-G2GM*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-28" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCC......GATAGTGAAACTAGGTTAAATCAGAAGTTCAAG...GACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-28", "curational_tags": null }, { "allele_description_id": "OGRDB:A02426", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5LEV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5LEV*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-26" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCT......GATAGTTATACTAACTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-26", "curational_tags": null }, { "allele_description_id": "OGRDB:A02440", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-FNOE.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FNOE*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-39" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCT...GTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTCCTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAAT......AGTGGTAATACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-39", "curational_tags": null }, { "allele_description_id": "OGRDB:A02443", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-AAHA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-AAHA*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCTAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCTAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-41" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCTAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAATCCTCTAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-41", "curational_tags": null }, { "allele_description_id": "OGRDB:A02448", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-PYRH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-PYRH*00", "sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGGTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTTGGTGAAGCAGAGCCATGGAAAGAGTCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGGCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGA", "coding_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGGTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTTGGTGAAGCAGAGCCATGGAAAGAGTCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGGCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGGTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTTGGTGAAGCAGAGCCATGGAAAGAGTCTTGAGTGGATTGGAGGTATTAATCCTAACAATGGTGCTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGGCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGA", "aligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGGTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACAACATGCACTTGGTGAAGCAGAGCCATGGAAAGAGTCTTGAGTGGATTGGAGGTATTAATCCTAAC......AATGGTGCTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGGCTGACATCTGAGGATTCTGCAGTCTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-8\r\nConserved Trp not found", "curational_tags": null }, { "allele_description_id": "OGRDB:A02405", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-ISUV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-ISUV*00", "sequence": "AGACAGCTCGGGCTAC", "coding_sequence": "AGACAGCTCGGGCTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD3-2*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 16, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD3-2*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02491", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-O54O.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-O54O*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCATCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCATCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCATCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCATCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGAT.........GATGTCAAGCGCTATAACCCAGCCCTGAAG...AGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02467", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-57QL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-57QL*00", "sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTAACTACAATCCATCTCTCAAAAGTCGAATCTCCATCACTCGAGACACATCCAAGAACCAGTACTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGA", "coding_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTAACTACAATCCATCTCTCAAAAGTCGAATCTCCATCACTCGAGACACATCCAAGAACCAGTACTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV3-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTAACTACAATCCATCTCTCAAAAGTCGAATCTCCATCACTCGAGACACATCCAAGAACCAGTACTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGA", "aligned_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCT...GGCCTGGTGAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATC............ACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGT.........GGTAGCACTAACTACAATCCATCTCTCAAA...AGTCGAATCTCCATCACTCGAGACACATCCAAGAACCAGTACTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV3-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02419", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-37TR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-37TR*00", "sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGCGAGGCCTGGGGCTTCAGCGAAGATGTCCTGCAAGGCTTCTGGCTACACATTCACTGACTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTTATCCTTACACTGATGGTACTGAGTACAATGATAAGTTCAAAGGCAAGGCCACACTGACTTCAGAAAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "coding_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGCGAGGCCTGGGGCTTCAGCGAAGATGTCCTGCAAGGCTTCTGGCTACACATTCACTGACTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTTATCCTTACACTGATGGTACTGAGTACAATGATAAGTTCAAAGGCAAGGCCACACTGACTTCAGAAAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGCGAGGCCTGGGGCTTCAGCGAAGATGTCCTGCAAGGCTTCTGGCTACACATTCACTGACTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTTATCCTTACACTGATGGTACTGAGTACAATGATAAGTTCAAAGGCAAGGCCACACTGACTTCAGAAAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "aligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCT...GAGCTGGCGAGGCCTGGGGCTTCAGCGAAGATGTCCTGCAAGGCTTCTGGCTACACATTC............ACTGACTATGTTATGCACTGGGTGAAGCAGAAGCCTGGGCAGGGCCTTGAGTGGATTGGATATATTTATCCTTAC......ACTGATGGTACTGAGTACAATGATAAGTTCAAA...GGCAAGGCCACACTGACTTCAGAAAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02406", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-R4FS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-R4FS*00", "sequence": "CTAACTGGGAC", "coding_sequence": "CTAACTGGGAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD4-1*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 11, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD4-1*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02453", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-SQWO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SQWO*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV14-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCA...GAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATT............AAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAG......AATGGTAATACTATATATGACCCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV14-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02395", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHJ-TVW6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-TVW6*00", "sequence": "ACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAG", "coding_sequence": "ACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHJ2*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 48, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHJ2*02", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02483", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-GIJT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GIJT*00", "sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "coding_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV6-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "aligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGA...GGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTC............AGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAA...GGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV6-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02429", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-NVKX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NVKX*00", "sequence": "CAGGTCCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCA", "coding_sequence": "CAGGTCCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-29" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGACCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCA", "aligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGACCT...GAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACTTTC............ACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGA......AGTGGTAATACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-29", "curational_tags": null }, { "allele_description_id": "OGRDB:A02417", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-BRO6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-BRO6*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCAACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCAACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-18" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCAACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAACTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCAACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTTATCCTGGT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-18", "curational_tags": null }, { "allele_description_id": "OGRDB:A02476", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-SVML.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SVML*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGC", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGC", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCGGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTAAT......GGTGGTAGCACCTATTATCCAGACACTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02481", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-ZV4X.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZV4X*00", "sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCA", "coding_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCA", "aligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCGGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGC......AGTAGTACCATCTACTATGCAGACACAGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02461", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-7MXA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-7MXA*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCCCAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCCA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCCCAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCCCAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCCA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCCCAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTA............ACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGT.........GGAAGCACAAATTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02479", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-NJKQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NJKQ*00", "sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "coding_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "aligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTG......GCATATAGTATCTACTATGCAGACACTGTGACG...GGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02499", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-CE5S.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-CE5S*00", "sequence": "CAGATCCAGTTGGTGCAGTCTGGATCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAAACTATGGAATGAACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACACTGGAGTGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "coding_sequence": "CAGATCCAGTTGGTGCAGTCTGGATCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAAACTATGGAATGAACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACACTGGAGTGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV9-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGATCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAAACTATGGAATGAACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACACTGGAGTGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGATCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTC............ACAAACTATGGAATGAACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTAC......ACTGGAGTGCCAACATATGCTGACGACTTCAAG...GGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV9-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02465", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-VX3J.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VX3J*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGAAATAAACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGACTGGTGGAAGCACAAATTATAATTCAGCTCTCATATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTAAGA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGAAATAAACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGACTGGTGGAAGCACAAATTATAATTCAGCTCTCATATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGAAATAAACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGACTGGTGGAAGCACAAATTATAATTCAGCTCTCATATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTAAGA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTA............ACCAGCTATGAAATAAACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGACTGGT.........GGAAGCACAAATTATAATTCAGCTCTCATA...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02452", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-WPS4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-WPS4*00", "sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "coding_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV11-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "aligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGA...GGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTT............AGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGAT......GGCAGTGCAATAAACTACGCACCATCCATAAAG...GATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV11-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02427", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5ETG.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5ETG*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-27" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACTCCTTC............ACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGCATGATTCATCCTTCC......GATAGTGAAACTAGGTTAAATCAGAAGTTCAAG...GACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCCGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-27", "curational_tags": null }, { "allele_description_id": "OGRDB:A02494", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-GDWR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GDWR*00", "sequence": "CAGGTTACTCTGAAAGAGTCGGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATAGTAAGTACTATAACGCAGCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "coding_sequence": "CAGGTTACTCTGAAAGAGTCGGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATAGTAAGTACTATAACGCAGCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCGGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATAGTAAGTACTATAACGCAGCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCGGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGAT.........GATAGTAAGTACTATAACGCAGCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02451", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-4K6F.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-4K6F*00", "sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGTAT", "coding_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGTAT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV11-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGTAT", "aligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGA...GGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTT............AGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGAT......GGCAGTGCAATAAACTACGCACCATCCATAAAG...GATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGTAT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV11-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02471", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-DDST.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-DDST*00", "sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTACTACTGTGC", "coding_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTACTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-11" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTACTACTGTGC", "aligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAAT......GGTGGTAGCACCTACTATCCAGACACTGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTACTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-11", "curational_tags": null }, { "allele_description_id": "OGRDB:A02487", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5YZ7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5YZ7*00", "sequence": "GAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGCTTCTCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTTACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACCTGAGTGGTTGGCTTTGATTAGAAACAAAGCTAATGGTTACACAACAGAGTATACTGCATCTGTTAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAACATCCTCTATCTTCAAATGAACACCCTGAGGGCTGAGGACAGTGCCACTTATTACTGTGTAAAAGC", "coding_sequence": "GAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGCTTCTCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTTACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACCTGAGTGGTTGGCTTTGATTAGAAACAAAGCTAATGGTTACACAACAGAGTATACTGCATCTGTTAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAACATCCTCTATCTTCAAATGAACACCCTGAGGGCTGAGGACAGTGCCACTTATTACTGTGTAAAAGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV7-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGATGGAATCTGGAGGAGGCTTGGTACAGCCTGGGGCTTCTCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTTACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACCTGAGTGGTTGGCTTTGATTAGAAACAAAGCTAATGGTTACACAACAGAGTATACTGCATCTGTTAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAACATCCTCTATCTTCAAATGAACACCCTGAGGGCTGAGGACAGTGCCACTTATTACTGTGTAAAAGC", "aligned_sequence": "GAGGTGAAGCTGATGGAATCTGGAGGA...GGCTTGGTACAGCCTGGGGCTTCTCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTT............ACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACCTGAGTGGTTGGCTTTGATTAGAAACAAAGCTAATGGTTACACAACAGAGTATACTGCATCTGTTAAG...GGTCGGTTCACCATCTCCAGAGATAATTCCCAAAACATCCTCTATCTTCAAATGAACACCCTGAGGGCTGAGGACAGTGCCACTTATTACTGTGTAAAAGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV7-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02466", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-HH7J.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-HH7J*00", "sequence": "GATGTGCAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGATACATAAGCTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCATGACACATCTAAGAACCAGTTCTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTATTGTGCA", "coding_sequence": "GATGTGCAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGATACATAAGCTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCATGACACATCTAAGAACCAGTTCTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTATTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV3-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTGCAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGATACATAAGCTACAGTGGTAGCACTAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCATGACACATCTAAGAACCAGTTCTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTATTGTGCA", "aligned_sequence": "GATGTGCAGCTTCAGGAGTCAGGACCT...GGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACC.........AGTGGTTATTACTGGCACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAGTGGATGGGATACATAAGCTACAGT.........GGTAGCACTAACTACAACCCATCTCTCAAA...AATCGAATCTCCATCACTCATGACACATCTAAGAACCAGTTCTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTATTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV3-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02422", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-FGSI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FGSI*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-22" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAACTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAAT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-22", "curational_tags": null }, { "allele_description_id": "OGRDB:A02424", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-MLJ2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-MLJ2*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-24" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTC............ACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGA......AGTGGTAATACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-24", "curational_tags": null }, { "allele_description_id": "OGRDB:A02495", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-3UD7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-3UD7*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACTCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTC", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACTCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACTCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTC", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACTCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCAAACATTTGGTGGGAT.........GATGATAAGTACTATAACCCATCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02404", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-7AYL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-7AYL*00", "sequence": "TCTACTATGATTACGAC", "coding_sequence": "TCTACTATGATTACGAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD2-4*01|IGHD2-9*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD2-4*01|IGHD2-9*02", "curational_tags": null }, { "allele_description_id": "OGRDB:A02484", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-3U4N.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-3U4N*00", "sequence": "GAGGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAGCTACTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACTGGCATTTATTACTGTAC", "coding_sequence": "GAGGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAGCTACTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACTGGCATTTATTACTGTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV6-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAGCTACTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACTGGCATTTATTACTGTAC", "aligned_sequence": "GAGGTGAAGCTTGAGGAGTCTGGAGGA...GGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTAGCCTCTGGATTCACTTTC............AGTAGCTACTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGATTGAAATCTAATAATTATGCAACACATTATGCGGAGTCTGTGAAA...GGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACTGGCATTTATTACTGTAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV6-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02438", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-NRA6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NRA6*00", "sequence": "CAGGTGCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "coding_sequence": "CAGGTGCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-37" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "aligned_sequence": "CAGGTGCAACTGCAGCAGCCTGGGTCT...GTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAAT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-37", "curational_tags": null }, { "allele_description_id": "OGRDB:A02489", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-AFC4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-AFC4*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGAT.........GATGACAAGCGCTATAACCCATCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02410", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-D7IW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-D7IW*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATAGCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTTCATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATAGCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTTCATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-11" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATAGCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTTCATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGACTTCTGGTTACTCATTC............ACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATAGCCTCGATTGGATTGGATATATTTATCCTTAC......AATGGTGTTTCTAGCTACAACCAGAAATTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTTCATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-11", "curational_tags": null }, { "allele_description_id": "OGRDB:A02488", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-3JRA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-3JRA*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGCAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGCAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGCAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGAT.........GATGACAAGCGCTATAACCCATCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAGCAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02407", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-4V4R.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-4V4R*00", "sequence": "CAACTGGGAC", "coding_sequence": "CAACTGGGAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD4-1*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 10, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD4-1*02", "curational_tags": null }, { "allele_description_id": "OGRDB:A02399", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-F2TA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-F2TA*00", "sequence": "TTCATTACTACGGCTAC", "coding_sequence": "TTCATTACTACGGCTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD1-2*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD1-2*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02421", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-CJFW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-CJFW*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAG", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-21" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAG", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTC............ACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGA......GGTGGTTATACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-21", "curational_tags": null }, { "allele_description_id": "OGRDB:A02436", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-LF2W.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-LF2W*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-35" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCT...GAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTC............ACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGA......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-35", "curational_tags": null }, { "allele_description_id": "OGRDB:A02441", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-VPE2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VPE2*00", "sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCACGGCCTGGAATGGATTGGAGCTATTCATCCAGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAA", "coding_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCACGGCCTGGAATGGATTGGAGCTATTCATCCAGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCACGGCCTGGAATGGATTGGAGCTATTCATCCAGGAAGTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAA", "aligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTT............ACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCACGGCCTGGAATGGATTGGAGCTATTCATCCAGGA......AGTGGTGGTACTGCCTACAATCAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCAGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGTACAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02411", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-XRM4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-XRM4*00", "sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTAACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCTTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "coding_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTAACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCTTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-12" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTAACAATGGTGGTACTGGCTACAACCAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCTTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "aligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGACTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTAAC......AATGGTGGTACTGGCTACAACCAGAAGTTCAAG...AGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCTTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-12", "curational_tags": null }, { "allele_description_id": "OGRDB:A02408", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-AH6Q.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-AH6Q*00", "sequence": "CAGATACAGCTGCAACAGTCAGGAGCTGAGCTGGCGAGTCCTGGGGCATCAGTGACACTGTCCTGCAAGGCTTCTGGCTACACATTTACTGACCATATTATGAATTGGGTAAAAAAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAGGATTTATCCAGTAAGTGGTGAAACTAACTACAATCAAAAGTTCATGGGCAAGGCCACATTCTCTGTAGACCGGTCCTCCAGCACAGTGTACATGGTGTTGAACAGCCTGACATCTGAGGACCCTGCTGTCTATTACTGTGCAA", "coding_sequence": "CAGATACAGCTGCAACAGTCAGGAGCTGAGCTGGCGAGTCCTGGGGCATCAGTGACACTGTCCTGCAAGGCTTCTGGCTACACATTTACTGACCATATTATGAATTGGGTAAAAAAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAGGATTTATCCAGTAAGTGGTGAAACTAACTACAATCAAAAGTTCATGGGCAAGGCCACATTCTCTGTAGACCGGTCCTCCAGCACAGTGTACATGGTGTTGAACAGCCTGACATCTGAGGACCCTGCTGTCTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATACAGCTGCAACAGTCAGGAGCTGAGCTGGCGAGTCCTGGGGCATCAGTGACACTGTCCTGCAAGGCTTCTGGCTACACATTTACTGACCATATTATGAATTGGGTAAAAAAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAGGATTTATCCAGTAAGTGGTGAAACTAACTACAATCAAAAGTTCATGGGCAAGGCCACATTCTCTGTAGACCGGTCCTCCAGCACAGTGTACATGGTGTTGAACAGCCTGACATCTGAGGACCCTGCTGTCTATTACTGTGCAA", "aligned_sequence": "CAGATACAGCTGCAACAGTCAGGAGCT...GAGCTGGCGAGTCCTGGGGCATCAGTGACACTGTCCTGCAAGGCTTCTGGCTACACATTT............ACTGACCATATTATGAATTGGGTAAAAAAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAGGATTTATCCAGTA......AGTGGTGAAACTAACTACAATCAAAAGTTCATG...GGCAAGGCCACATTCTCTGTAGACCGGTCCTCCAGCACAGTGTACATGGTGTTGAACAGCCTGACATCTGAGGACCCTGCTGTCTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02463", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-IM3C.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-IM3C*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCAGGTACTACTGTGCC", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCAGGTACTACTGTGCC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCAGGTACTACTGTGCC", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGT.........GGAGGCACAAATTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCAGGTACTACTGTGCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02432", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-PTGV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-PTGV*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCCTGGATAAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCCTGGATAAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-31" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTCCTGGATAAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTC............AGTAGCTCCTGGATAAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGA......GATGGTGATACTAACTACAATGGAAAGTTCAAG...GGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-31", "curational_tags": null }, { "allele_description_id": "OGRDB:A02394", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHJ-OE6Q.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-OE6Q*00", "sequence": "CTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGGTCACCGTCTCCTCAG", "coding_sequence": "CTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGGTCACCGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHJ1*03" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 53, "j_codon_frame": 2, "j_cdr3_end": 20, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHJ1*03", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02409", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-SHLW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SHLW*00", "sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "coding_sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-10" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "aligned_sequence": "GAGGTCCAGCTGCAACAATCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTC............ACTGACTACTACATGAAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTAAC......AATGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-10", "curational_tags": null }, { "allele_description_id": "OGRDB:A02437", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-XFJ6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-XFJ6*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGGACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGGACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-36" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGGACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCT...GTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAAT......AGTGGTAGGACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-36", "curational_tags": null }, { "allele_description_id": "OGRDB:A02425", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-KXC4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-KXC4*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAAATTGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACCGACTATTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGCAATTGATCCTTCTGATAGTTATACTAGCTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCTCAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAAATTGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACCGACTATTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGCAATTGATCCTTCTGATAGTTATACTAGCTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCTCAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-25" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAAATTGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACCGACTATTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGCAATTGATCCTTCTGATAGTTATACTAGCTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCTCAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAAATTGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTT............ACCGACTATTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGCAATTGATCCTTCT......GATAGTTATACTAGCTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACACATCCTCCAGCTCAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-25", "curational_tags": null }, { "allele_description_id": "OGRDB:A02490", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-3W4V.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-3W4V*00", "sequence": "CAAGTTACTCTAAAAGAGTCTGGCCCTGGGATATTGAAGCCCTCACAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTACTAATATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTAACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACTTACTACTGTGCTC", "coding_sequence": "CAAGTTACTCTAAAAGAGTCTGGCCCTGGGATATTGAAGCCCTCACAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTACTAATATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTAACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACTTACTACTGTGCTC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAGTTACTCTAAAAGAGTCTGGCCCTGGGATATTGAAGCCCTCACAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTACTAATATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTAACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACTTACTACTGTGCTC", "aligned_sequence": "CAAGTTACTCTAAAAGAGTCTGGCCCT...GGGATATTGAAGCCCTCACAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTACTAATATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGAT.........GATGATAAGTACTATAACCCATCCCTGAAG...AGCCGGCTAACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACTTACTACTGTGCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02396", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHJ-RGEH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-RGEH*00", "sequence": "CCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAG", "coding_sequence": "CCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHJ3*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 48, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHJ3*01", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02403", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-TMGL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-TMGL*00", "sequence": "TCTATGATGGTTACTAC", "coding_sequence": "TCTATGATGGTTACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD2-3*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD2-3*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02493", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5RPF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5RPF*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTAACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGAGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCAGCCCTGAAAAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGTCACTGCAGATACTGCCACATACTACTGTGCTC", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTAACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGAGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCAGCCCTGAAAAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGTCACTGCAGATACTGCCACATACTACTGTGCTC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTAACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGAGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCAGCCCTGAAAAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGTCACTGCAGATACTGCCACATACTACTGTGCTC", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTAACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGAGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGAAT.........GATGATAAGTACTATAACCCAGCCCTGAAA...AGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGTCACTGCAGATACTGCCACATACTACTGTGCTC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02478", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-RXKT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-RXKT*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAA", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAA", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGT......GGTGGTAGCACCTATTATCCAGACACTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02450", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-GRZR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GRZR*00", "sequence": "GAGGTGCAGCTTGTTGAGACTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCAATGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "coding_sequence": "GAGGTGCAGCTTGTTGAGACTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCAATGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV10-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTTGTTGAGACTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCAATGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "aligned_sequence": "GAGGTGCAGCTTGTTGAGACTGGTGGA...GGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTC............AATACCAATGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAA...GACAGGTTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV10-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02464", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-UNUS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-UNUS*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTA............ACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGT.........GGAAGCACAAATTATAATTCAGCTCTCATG...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02492", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-L2XC.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-L2XC*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV8-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGTCAAGCGCTATAACCCAGCCCTGAAGAGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGAT.........GATGTCAAGCGCTATAACCCAGCCCTGAAG...AGCCGACTGACTATCTCCAAGGATACCTCCAGCAGCCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV8-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02458", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-QLUS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QLUS*00", "sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAACACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCCA", "coding_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAACACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAACACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCCA", "aligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCT...GGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTA............ACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGT.........GGAAACACAGACTATAATGCAGCTTTCATA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02462", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-QEOB.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QEOB*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACGCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACGCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACGCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTA............ACTAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGAT.........GGAAGCACAACCTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAGGACAACGCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02485", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-35YX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-35YX*00", "sequence": "GAGGTGAAGCTGGATGAGTCTGGTGGAGGCTTGGTGCAACCTGGGAGGTCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTTAGTGACTATTGGATGAACTGGGTCCACCAGTCTCCAGAGAAAGGACTGGAGTGGGTAGCACAAATTAGAAACAAACCTTATAATTATGTAACATATTATTCAGATTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACGGGCATCTATTACTGTAC", "coding_sequence": "GAGGTGAAGCTGGATGAGTCTGGTGGAGGCTTGGTGCAACCTGGGAGGTCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTTAGTGACTATTGGATGAACTGGGTCCACCAGTCTCCAGAGAAAGGACTGGAGTGGGTAGCACAAATTAGAAACAAACCTTATAATTATGTAACATATTATTCAGATTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACGGGCATCTATTACTGTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV6-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGATGAGTCTGGTGGAGGCTTGGTGCAACCTGGGAGGTCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTTAGTGACTATTGGATGAACTGGGTCCACCAGTCTCCAGAGAAAGGACTGGAGTGGGTAGCACAAATTAGAAACAAACCTTATAATTATGTAACATATTATTCAGATTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACGGGCATCTATTACTGTAC", "aligned_sequence": "GAGGTGAAGCTGGATGAGTCTGGTGGA...GGCTTGGTGCAACCTGGGAGGTCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTT............AGTGACTATTGGATGAACTGGGTCCACCAGTCTCCAGAGAAAGGACTGGAGTGGGTAGCACAAATTAGAAACAAACCTTATAATTATGTAACATATTATTCAGATTCTGTGAAA...GGCAGATTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGAGCTGAAGACACGGGCATCTATTACTGTAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV6-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02439", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-OYF6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-OYF6*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-38" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAATAGTGGTAATATTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCT...GTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCCTAAT......AGTGGTAATATTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACGTGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-38", "curational_tags": null }, { "allele_description_id": "OGRDB:A02482", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5MIJ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5MIJ*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAACCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGC", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAACCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAACCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGC", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAACCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGT......GGTAGTTACACCTACTATCCAGACAGTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02449", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-JC5L.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-JC5L*00", "sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTCACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACGATGGTAGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTG", "coding_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTCACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACGATGGTAGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTCACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACGATGGTAGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTG", "aligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTC............ACTCACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTAC......GATGGTAGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02460", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-LDXW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-LDXW*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGACCTTGTGCAGCCCTCACAGACCCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTTCACTGGGTTCGCCAGCCTCCAGGAAAGGGACTGGAGTGGGTGGGAACAATGGGCTGGGATGACAAAAAATATTATAATTCAGCTCTAAAATCTCGACTGAGCATCAGCAGGGATACCTCCAAGAACCAAGTTTTCTTAAAACTGAGCAGTCTGCAAACTGAAGACACAGCCATGTACTACTGT", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGACCTTGTGCAGCCCTCACAGACCCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTTCACTGGGTTCGCCAGCCTCCAGGAAAGGGACTGGAGTGGGTGGGAACAATGGGCTGGGATGACAAAAAATATTATAATTCAGCTCTAAAATCTCGACTGAGCATCAGCAGGGATACCTCCAAGAACCAAGTTTTCTTAAAACTGAGCAGTCTGCAAACTGAAGACACAGCCATGTACTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 285, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGACCTTGTGCAGCCCTCACAGACCCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTTCACTGGGTTCGCCAGCCTCCAGGAAAGGGACTGGAGTGGGTGGGAACAATGGGCTGGGATGACAAAAAATATTATAATTCAGCTCTAAAATCTCGACTGAGCATCAGCAGGGATACCTCCAAGAACCAAGTTTTCTTAAAACTGAGCAGTCTGCAAACTGAAGACACAGCCATGTACTACTGT", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GACCTTGTGCAGCCCTCACAGACCCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGGTGTTCACTGGGTTCGCCAGCCTCCAGGAAAGGGACTGGAGTGGGTGGGAACAATGGGCTGGGAT.........GACAAAAAATATTATAATTCAGCTCTAAAA...TCTCGACTGAGCATCAGCAGGGATACCTCCAAGAACCAAGTTTTCTTAAAACTGAGCAGTCTGCAAACTGAAGACACAGCCATGTACTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02456", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-WR2L.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-WR2L*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV14-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATT............AAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAG......AATGGTGATACTGAATATGCCTCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV14-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02434", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-TW2E.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-TW2E*00", "sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAG", "coding_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-33" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAG", "aligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTAAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACTACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAGATTTATCCTGGA......AGTGGTAATACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-33", "curational_tags": null }, { "allele_description_id": "OGRDB:A02469", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-C53X.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-C53X*00", "sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGTGCA", "coding_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACTGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGTGCA", "aligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATTACATGTCTTGGGTTCGGCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTAATACT......GGTGGTAGCACCTACTATCCAGACACTGTGAAG...GGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAATTCTGAGGACACAGCCGTGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02435", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-6EQK.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-6EQK*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCA", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-34" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCA", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGA......GATGGTAGTACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTACAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGGCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-34", "curational_tags": null }, { "allele_description_id": "OGRDB:A02412", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-QLQO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QLQO*00", "sequence": "GAAGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAAGCTTCTGGTTATTCTTTCACTGGCTACTACATAGACTGGGTGAAGCAGAGTCCTGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTCCAATGGTGAAACCAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGTCAACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "coding_sequence": "GAAGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAAGCTTCTGGTTATTCTTTCACTGGCTACTACATAGACTGGGTGAAGCAGAGTCCTGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTCCAATGGTGAAACCAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGTCAACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-13" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAAGCTTCTGGTTATTCTTTCACTGGCTACTACATAGACTGGGTGAAGCAGAGTCCTGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTCCAATGGTGAAACCAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGTCAACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "aligned_sequence": "GAAGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAAGCTTCTGGTTATTCTTTC............ACTGGCTACTACATAGACTGGGTGAAGCAGAGTCCTGGAAAGAGCCTTGAGTGGATTGGATATATTTATCCTTCC......AATGGTGAAACCAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGTCAACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-13", "curational_tags": null }, { "allele_description_id": "OGRDB:A02401", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-U6K7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-U6K7*00", "sequence": "CCTACTATAGTTACTATAGTAACTAC", "coding_sequence": "CCTACTATAGTTACTATAGTAACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD2-12_var" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 26, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD2-12_var", "curational_tags": null }, { "allele_description_id": "OGRDB:A02459", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-ZKN6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZKN6*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAAACTATAATTCAGCTCTCAAATCCAGACTGAGCACCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAAACTATAATTCAGCTCTCAAATCCAGACTGAGCACCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTAACCGGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAAACTATAATTCAGCTCTCAAATCCAGACTGAGCACCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCAGGGTTCTCATTA............ACCGGCTATGGTGTAAGCTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGAT.........GGAAGCACAAACTATAATTCAGCTCTCAAA...TCCAGACTGAGCACCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02415", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-Y3TL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-Y3TL*00", "sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCTGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCTGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-16" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCTGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACT...GTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTT............ACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGCGCTATTTATCCTGGA......AATAGTGATACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCAAACTGACTGCAGTCACATCTGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-16", "curational_tags": null }, { "allele_description_id": "OGRDB:A02472", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-XJRP.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-XJRP*00", "sequence": "GAAGTTAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGC", "coding_sequence": "GAAGTTAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-12" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTTAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGC", "aligned_sequence": "GAAGTTAAGCTCGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGCCATTAATAGTAAT......GGTGGTAGCACCTATTATCCAGACACTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-12", "curational_tags": null }, { "allele_description_id": "OGRDB:A02433", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-MQQF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-MQQF*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-32" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAATGGAAAGTTCAAGGGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTATGCATTC............AGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGA......GATGGTGATACTAACTACAATGGAAAGTTCAAG...GGTAAAGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-32", "curational_tags": null }, { "allele_description_id": "OGRDB:A02475", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-U7BS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-U7BS*00", "sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTTACATTCAGTAGCCATTTCATGGCATGGGTCCGCCAAACTCCAGAGAAAAGACTGGAGTGGGCCGCAAACATTTATCCTGATGGTGGTACCGCCTACTATCCAAACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAATATCATGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGACA", "coding_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTTACATTCAGTAGCCATTTCATGGCATGGGTCCGCCAAACTCCAGAGAAAAGACTGGAGTGGGCCGCAAACATTTATCCTGATGGTGGTACCGCCTACTATCCAAACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAATATCATGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGACA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTTACATTCAGTAGCCATTTCATGGCATGGGTCCGCCAAACTCCAGAGAAAAGACTGGAGTGGGCCGCAAACATTTATCCTGATGGTGGTACCGCCTACTATCCAAACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAATATCATGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGACA", "aligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTTACATTC............AGTAGCCATTTCATGGCATGGGTCCGCCAAACTCCAGAGAAAAGACTGGAGTGGGCCGCAAACATTTATCCTGAT......GGTGGTACCGCCTACTATCCAAACACTGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAGGAATATCATGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGTAAGACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02444", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-N64F.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-N64F*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGAACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGAACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-42" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCTGTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTCACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAATAGTGGTAGAACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGTCT...GTGCTGGTGAGGCCTGGAGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACATTC............ACCAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTTATCCTAAT......AGTGGTAGAACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGGATCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-42", "curational_tags": null }, { "allele_description_id": "OGRDB:A02442", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-IXUZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-IXUZ*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATATTTCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTG", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATATTTCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-40" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTCACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATATTTCCTGGAACTGGTACTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTG", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGACTTCTGGCTACACCTTC............ACCAGCTACTGGATTCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATATTTCCTGGA......ACTGGTACTACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTATAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCTGTCTATTTCTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-40", "curational_tags": null }, { "allele_description_id": "OGRDB:A02498", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-67UK.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-67UK*00", "sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCCGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGCTATACCTTCACAAACTATGCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATATACACCAACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACATGGCTACATATTTCTGTGC", "coding_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCCGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGCTATACCTTCACAAACTATGCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATATACACCAACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACATGGCTACATATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV9-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCCGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGCTATACCTTCACAAACTATGCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATATACACCAACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACATGGCTACATATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCT...GAGCTGAAGAAGCCCGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGCTATACCTTC............ACAAACTATGCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATATACACCAAC......ACTGGAGAGCCAACATATGCTGAAGAGTTCAAG...GGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACATGGCTACATATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV9-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02420", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-DTV7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-DTV7*00", "sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGACTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "coding_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGACTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-20" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGACTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "aligned_sequence": "AAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACTGAGTATACTATACACTGGGTAAAGCAGAGGACTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGA......AGTGGTAGTATAAAGTACAATGAGAAATTCAAG...GACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGACACG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-20", "curational_tags": null }, { "allele_description_id": "OGRDB:A02480", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-VYOV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VYOV*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGCAA", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGCAA", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGA...GGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTC............AGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGAT......GGTAGTAGCACCTACTATCTGGACTCCTTGAAG...AGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02477", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-JEOG.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-JEOG*00", "sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTTGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTGCA", "coding_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTTGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTTGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTGCA", "aligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTATTACATGTATTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTTGCAGAAATTAGTAGTGGT......GGTGGTAACACCTACTATCCAGACAGTGTGAAG...GGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACAGCCATGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02486", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-5ZAK.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5ZAK*00", "sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGC", "coding_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV7-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGC", "aligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGA...GGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTC............ACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAG...GGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV7-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02446", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-AWHJ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-AWHJ*00", "sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACTTGTTAATCCTAGCACTGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "coding_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACTTGTTAATCCTAGCACTGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACTTGTTAATCCTAGCACTGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "aligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCT...GTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTC............ACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACTTGTTAATCCTAGC......ACTGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02468", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-KD4A.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-KD4A*00", "sequence": "GAGGTGAAGCTTCTCGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGGTAGCAGTACGATAAACTATGCACCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAATGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGC", "coding_sequence": "GAGGTGAAGCTTCTCGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGGTAGCAGTACGATAAACTATGCACCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAATGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV4-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTTCTCGAGTCTGGAGGTGGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTTAGTAGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGGTAGCAGTACGATAAACTATGCACCATCTCTAAAGGATAAATTCATCATCTCCAGAGACAATGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGC", "aligned_sequence": "GAGGTGAAGCTTCTCGAGTCTGGAGGT...GGCCTGGTGCAGCCTGGAGGATCCCTGAAACTCTCCTGTGCAGCCTCAGGATTCGATTTT............AGTAGATACTGGATGAGTTGGGTCCGGCAGGCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGGT......AGCAGTACGATAAACTATGCACCATCTCTAAAG...GATAAATTCATCATCTCCAGAGACAATGCCAAAAATACGCTGTACCTGCAAATGAGCAAAGTGAGATCTGAGGACACAGCCCTTTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV4-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02423", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-NROV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NROV*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-23" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAAT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-23", "curational_tags": null }, { "allele_description_id": "OGRDB:A02497", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-22ZX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-22ZX*00", "sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCGACACTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "coding_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCGACACTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV9-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCGACACTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTC............ACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCGAC......ACTGGAGAGCCAACATATGCTGACGACTTCAAG...GGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV9-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02457", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-MJU4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-MJU4*00", "sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATATTACTGTGC", "coding_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV2-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATATTACTGTGC", "aligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCT...GGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTA............ACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGT.........GGAAGCACAGACTATAATGCAGCTTTCATA...TCCAGACTGAGCATCAGCAAGGACAATTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV2-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02398", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-VS5J.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-VS5J*00", "sequence": "TTTATTACTACGGTAGTAGCTAC", "coding_sequence": "TTTATTACTACGGTAGTAGCTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD1-1*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 23, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD1-1*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02454", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-R262.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-R262*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV14-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCA...GAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATT............AAAGACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAG......GATGGTGAAACTAAATATGCCCCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV14-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02473", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-ZPB3.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZPB3*00", "sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGACAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCA", "coding_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGACAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-13" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACAATGACAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCA", "aligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCTCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGGCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGT......GGTAGTTACACCTACTATCCAGACAGTGTGAAG...GGGCGATTCACCATCTCCAGAGACAATGACAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-13", "curational_tags": null }, { "allele_description_id": "OGRDB:A02496", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-NVD7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NVD7*00", "sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAATAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGCAAG", "coding_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAATAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV9-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAATAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGCAAG", "aligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTC............ACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGAC......ACTGGAGAGCCAACATATGCTGATGACTTCAAG...GGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAATAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV9-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02455", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-YW25.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-YW25*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTG", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV14-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTG", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCA...GAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATT............AAAAACACCTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCG......AATGGTAATACTAAATATGCCCCGAAGTTCCAG...GGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV14-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02402", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-QEGR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-QEGR*00", "sequence": "TCTACTATGGTTACGAC", "coding_sequence": "TCTACTATGGTTACGAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD2-2*01|IGHD2-7*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD2-2*01|IGHD2-7*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02447", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-FRUS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FRUS*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCGGAGCCTGACATCTGAGGACTCTGCACTCTATTATTGTGCAAG", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCGGAGCCTGACATCTGAGGACTCTGCACTCTATTATTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTTACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTACAATGGTGATACTTTCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCGGAGCCTGACATCTGAGGACTCTGCACTCTATTATTGTGCAAG", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTT............ACTGGCTACTTTATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGACGTATTAATCCTTAC......AATGGTGATACTTTCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCTAGCACAGCCCACATGGAGCTCCGGAGCCTGACATCTGAGGACTCTGCACTCTATTATTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02400", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHD-WHDL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-WHDL*00", "sequence": "TCTACTATGGTAACTAC", "coding_sequence": "TCTACTATGGTAACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHD2-1*01|IGHD2-8*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHD2-1*01|IGHD2-8*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02431", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-UTKV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-UTKV*00", "sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTGCAAG", "coding_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-30" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTGCAAG", "aligned_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCT...GAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTC............ACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGA......GATGGTAGTACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACATTGACTGCAGATAAATCCTCCAGCACTGCCTACATGCAGCTCAACAGCCTGACATCTGAGGATTCTGCAGTGTATTTCTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-30", "curational_tags": null }, { "allele_description_id": "OGRDB:A02445", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-XUAL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-XUAL*00", "sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGTCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "coding_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGTCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV1-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGTCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "aligned_sequence": "GAGATCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACAACATGCAGTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGAAATTAATCCTTAC......AATGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGTCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV1-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02474", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHV-UXPY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-UXPY*00", "sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGGTGATGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCAAG", "coding_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGGTGATGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHV5-14" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGGTGATGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCAAG", "aligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGCCATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAACCATTAGTGGTGAT......GGTGGTAACACCTACTATCCAGACAGTGTGAAG...GGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHV5-14", "curational_tags": null }, { "allele_description_id": "OGRDB:A02397", "allele_description_ref": "OGRDB:Mus musculus/PWD/PhJ_IGH:IGHJ-WQBB.2", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 2, "release_date": "12-Oct-2024", "release_description": "Correct j_cdr3_end", "label": "IGHJ0-WQBB*00", "sequence": "ATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAG", "coding_sequence": "ATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:PWD_PhJ_IGHJ4*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "PWD/PhJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 54, "j_codon_frame": 3, "j_cdr3_end": 21, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: PWD_PhJ_IGHJ4*01", "curational_tags": [ null ] } ], "curation": "The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)" } ] }