{ "GermlineSet": [ { "germline_set_id": "OGRDB:G00051", "author": "William Lees", "lab_name": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "acknowledgements": null, "release_version": 1, "release_description": "The germline set is based on sequences published in Watson et al. (2019) ", "release_date": "2022-05-15", "germline_set_name": "MSM/MsJ IGH", "germline_set_ref": "OGRDB:MSM/MsJ IGH.1", "pub_ids": "PMID:31441114", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "locus": "IGH", "allele_descriptions": [ { "allele_description_id": "OGRDB:A02206", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-25TR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-25TR*00", "sequence": "AGACAGCTCGGGCTAC", "coding_sequence": "AGACAGCTCGGGCTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD3-2*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 16, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD3-2*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02205", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-2ZLC.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-2ZLC*00", "sequence": "CCTACTATAGTAACTAC", "coding_sequence": "CCTACTATAGTAACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD2-5*01|IGHD2-6*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD2-5*01|IGHD2-6*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02202", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-BCLQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-BCLQ*00", "sequence": "TCTACTATGGTTACGAC", "coding_sequence": "TCTACTATGGTTACGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD2-2*01|IGHD2-7*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD2-2*01|IGHD2-7*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02204", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-D5PR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-D5PR*00", "sequence": "TCTACTATGATTACGAC", "coding_sequence": "TCTACTATGATTACGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD2-4*01|IGHD2-9*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD2-4*01|IGHD2-9*02", "curational_tags": null }, { "allele_description_id": "OGRDB:A02207", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-FBFM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-FBFM*00", "sequence": "CTAACTGGGAC", "coding_sequence": "CTAACTGGGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD4-1*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 11, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD4-1*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02203", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-JH5Q.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-JH5Q*00", "sequence": "TCTATGATGGTTACTAC", "coding_sequence": "TCTATGATGGTTACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD2-3*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD2-3*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02208", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-NFS3.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-NFS3*00", "sequence": "CAACTGGGAC", "coding_sequence": "CAACTGGGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD4-1*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 10, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD4-1*02", "curational_tags": null }, { "allele_description_id": "OGRDB:A02201", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-TDIN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-TDIN*00", "sequence": "TCTACTATGGTAACTAC", "coding_sequence": "TCTACTATGGTAACTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD2-1*01|IGHD2-8*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 17, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD2-1*01|IGHD2-8*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02200", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHD-UXMZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHD0-UXMZ*00", "sequence": "TTTATTACTACGGTAGTAGCTAC", "coding_sequence": "TTTATTACTACGGTAGTAGCTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHD1-1*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "D", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 23, "d_rs_3_prime_start": null, "d_rs_3_prime_end": null, "d_rs_5_prime_start": null, "d_rs_5_prime_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHD1-1*01", "curational_tags": null }, { "allele_description_id": "OGRDB:A02210", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHJ-2NLR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-2NLR*00", "sequence": "ACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAG", "coding_sequence": "ACTACTTTGACTACTGGGGCCAAGGCACCACTCTCACAGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHJ2*02" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 48, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHJ2*02", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02209", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHJ-AJMV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-AJMV*00", "sequence": "CTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGGTCACCGTCTCCTCAG", "coding_sequence": "CTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGGTCACCGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHJ1*03" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 53, "j_codon_frame": 2, "j_cdr3_end": 20, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHJ1*03", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02212", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHJ-KMFY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-KMFY*00", "sequence": "ATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAG", "coding_sequence": "ATTACTATGCTATGGACTACTGGGGTCAAGGAACCTCAGTCACCGTCTCCTCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHJ4*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 54, "j_codon_frame": 3, "j_cdr3_end": 21, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHJ4*01", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02211", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHJ-SES2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHJ0-SES2*00", "sequence": "CCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAG", "coding_sequence": "CCTGGTTTGCTTACTGGGGCCAAGGGACTCTGGTCACTGTCTCTGCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHJ3*01" ], "locus": "IGH", "chromosome": null, "sequence_type": "J", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 48, "j_codon_frame": 3, "j_cdr3_end": 15, "j_rs_start": null, "j_rs_end": null, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHJ3*01", "curational_tags": [ null ] }, { "allele_description_id": "OGRDB:A02262", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-23CQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-23CQ*00", "sequence": "CAGGTGCAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "coding_sequence": "CAGGTGCAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-10" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "aligned_sequence": "CAGGTGCAACTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGT.........GGAGGCACAAATTATAATTCAGCTTTCATG...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-10", "curational_tags": null }, { "allele_description_id": "OGRDB:A02236", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-25EB.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-25EB*00", "sequence": "CAGGTCCAGCTGAAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAAGATTGGTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAA", "coding_sequence": "CAGGTCCAGCTGAAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAAGATTGGTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-30" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGAGCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAAGATTGGTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAA", "aligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGAGCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTC............ACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAAAGATTGGTCCTGGA......AGTGGTAGTACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-30", "curational_tags": null }, { "allele_description_id": "OGRDB:A02273", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2F6T.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2F6T*00", "sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGCAAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTTACTACAATCCATCTCTCAAAAGTCGAATCTCCATAACTCGAGACACATCCAAGAACCAGTATTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAG", "coding_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGCAAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTTACTACAATCCATCTCTCAAAAGTCGAATCTCCATAACTCGAGACACATCCAAGAACCAGTATTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV3-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCTGGCCTGGCAAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATCACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCACTTACTACAATCCATCTCTCAAAAGTCGAATCTCCATAACTCGAGACACATCCAAGAACCAGTATTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAG", "aligned_sequence": "GAGGTGCAGCTTCAGGAGTCAGGACCT...GGCCTGGCAAAACCTTCTCAGACTCTGTCCCTCACCTGTTCTGTCACTGGCTACTCCATC............ACCAGTGATTACTGGAACTGGATCCGGAAATTCCCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGT.........GGTAGCACTTACTACAATCCATCTCTCAAA...AGTCGAATCTCCATAACTCGAGACACATCCAAGAACCAGTATTACCTGCAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV3-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02235", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2JMR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2JMR*00", "sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTATCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACACTGCAGTCTATTACTGTGCAAG", "coding_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTATCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACACTGCAGTCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTATCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACACTGCAGTCTATTACTGTGCAAG", "aligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATACCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACAACATGGACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAAC......AATGGTGGTACTATCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACACTGCAGTCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02234", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2LUL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2LUL*00", "sequence": "CAGGTCCAGCTGAAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGC", "coding_sequence": "CAGGTCCAGCTGAAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-29" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGC", "aligned_sequence": "CAGGTCCAGCTGAAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACTTTC............ACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGCAAGGATTTATCCTGGA......AGTGGTAATACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGAAAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCTGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-29", "curational_tags": null }, { "allele_description_id": "OGRDB:A02289", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2O3V.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2O3V*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGTCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGTCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV8-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGTCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGCTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGTCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTGGTATGGGTGTGAGCTGGATTCGTCAGCCTTCAGGAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGAT.........GATGACAAGCGCTATAACCCATCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAGAAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV8-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02285", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2VGF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2VGF*00", "sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "coding_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV6-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "aligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGA...GGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCCTGTGTTGCCTCTGGATTCACTTTC............AGTAACTACTGGATGAACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTCAAATTAGATTGAAATCTGATAATTATGCAACACATTATGCGGAGTCTGTGAAA...GGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAACTTAAGGGCTGAAGACACTGGAATTTATTACTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV6-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02244", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-2ZSK.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-2ZSK*00", "sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTATATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGTTATTAATCCTTACAACGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "coding_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTATATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGTTATTAATCCTTACAACGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTCACTGACTACTATATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGTTATTAATCCTTACAACGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "aligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCT...GTGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGTAAGGCTTCTGGATACACATTC............ACTGACTACTATATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGTTATTAATCCTTAC......AACGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTTGACAAGTCCTCCAGCACAGCCTACATGGAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02221", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-3D4C.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-3D4C*00", "sequence": "GAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATGTCCTGCAAGACTTCTGGATATACATTCACAAGCTACGGTATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTGGAATGGATTGGATATATTTATATTGGAAATGGTTATACTGAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTTCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAATCTATTTCTGTGC", "coding_sequence": "GAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATGTCCTGCAAGACTTCTGGATATACATTCACAAGCTACGGTATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTGGAATGGATTGGATATATTTATATTGGAAATGGTTATACTGAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTTCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAATCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-17" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTTCAGCAGTCTGGAGCTGAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATGTCCTGCAAGACTTCTGGATATACATTCACAAGCTACGGTATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTGGAATGGATTGGATATATTTATATTGGAAATGGTTATACTGAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTTCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAATCTATTTCTGTGC", "aligned_sequence": "GAGGTCCAGCTTCAGCAGTCTGGAGCT...GAGCTGGTGAGGCCTGGGTCCTCAGTGAAGATGTCCTGCAAGACTTCTGGATATACATTC............ACAAGCTACGGTATAAACTGGGTGAAGCAGAGGCCTGGACAGGGCCTGGAATGGATTGGATATATTTATATTGGA......AATGGTTATACTGAGTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTTCAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCAATCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-17", "curational_tags": null }, { "allele_description_id": "OGRDB:A02228", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-5DJX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5DJX*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACGGCAGACACATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACGGCAGACACATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-23" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTCACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGTGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACGGCAGACACATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACAGCTTC............ACAAGCTACTATATACACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGA......AGTGGTAATACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACGGCAGACACATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTAACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-23", "curational_tags": null }, { "allele_description_id": "OGRDB:A02224", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-5HIY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-5HIY*00", "sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCATACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "coding_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCATACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTTACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAAACTGGTGGTACTGCCTACAATCAGAAGTTCAAGGGCAAGGCCATACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "aligned_sequence": "CAGGTTCAACTGCAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGGCTTCAGTGACGCTGTCCTGCAAGGCTTCGGGCTACACATTT............ACTGACTATGAAATGCACTGGGTGAAGCAGACACCTGTGCATGGCCTGGAATGGATTGGAGCTATTGATCCTGAA......ACTGGTGGTACTGCCTACAATCAGAAGTTCAAG...GGCAAGGCCATACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02293", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-6JXW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-6JXW*00", "sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAGACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGT", "coding_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAGACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV9-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGACACTGGAGAGCCAACATATGCTGAAGAGTTCAAGGGACGGTTTGCCTTCTCTTTGGAGACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGT", "aligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTC............ACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCATGATATACACCGAC......ACTGGAGAGCCAACATATGCTGAAGAGTTCAAG...GGACGGTTTGCCTTCTCTTTGGAGACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV9-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02229", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-6XKZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-6XKZ*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGATGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGATGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-24" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGATGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGATGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGAGATTGATCCTTCT......GATAGTTATACTAACTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-24", "curational_tags": null }, { "allele_description_id": "OGRDB:A02276", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-724F.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-724F*00", "sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "coding_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-11" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTATTACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAACACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "aligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTATTACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGT......GGTGGTAACACCTACTATCCAGACAGTGTGAAG...GGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-11", "curational_tags": null }, { "allele_description_id": "OGRDB:A02233", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-7EWH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-7EWH*00", "sequence": "CAGGTCCAGCTACAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTTACTGTAGACAAATCCTCCAGCACAGCCTACATGTTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGT", "coding_sequence": "CAGGTCCAGCTACAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTTACTGTAGACAAATCCTCCAGCACAGCCTACATGTTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-28" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTACAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTTACTGTAGACAAATCCTCCAGCACAGCCTACATGTTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGT", "aligned_sequence": "CAGGTCCAGCTACAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTC............ACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTTTCCTGGA......AGTGGTAGTACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTTACTGTAGACAAATCCTCCAGCACAGCCTACATGTTGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-28", "curational_tags": null }, { "allele_description_id": "OGRDB:A02258", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ACUE.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ACUE*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTGC", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV14-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCAGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAAACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCGAATGGTAATACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTGC", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGTGGCA...GAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATT............AAAAACACCTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGCG......AATGGTAATACTAAATATGCCCCGAAGTTCCAG...GGCAAGGCCACTATAACTGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCATCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV14-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02213", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-BT4P.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-BT4P*00", "sequence": "CAGGCTTATCTACAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACATTTACCAGTTACAATATGCACTGGGTAAAGCAGACACCTAGACAGGGCCTGGAATGGATTGGAGCTATTTATCCAGGAAATGGTGATACTTCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGA", "coding_sequence": "CAGGCTTATCTACAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACATTTACCAGTTACAATATGCACTGGGTAAAGCAGACACCTAGACAGGGCCTGGAATGGATTGGAGCTATTTATCCAGGAAATGGTGATACTTCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGCTTATCTACAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACATTTACCAGTTACAATATGCACTGGGTAAAGCAGACACCTAGACAGGGCCTGGAATGGATTGGAGCTATTTATCCAGGAAATGGTGATACTTCCTACAATCAGAAGTTCAAGGGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGA", "aligned_sequence": "CAGGCTTATCTACAGCAGTCTGGGGCT...GAGCTGGTGAGGCCTGGGGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACATTT............ACCAGTTACAATATGCACTGGGTAAAGCAGACACCTAGACAGGGCCTGGAATGGATTGGAGCTATTTATCCAGGA......AATGGTGATACTTCCTACAATCAGAAGTTCAAG...GGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02219", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-BWXT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-BWXT*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-15" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTCACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGAAGTGGTGGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTAAGGCCTGGGACTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACGCCTTC............ACTAATTACTTGATAGAGTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGAGTGATTAATCCTGGA......AGTGGTGGTACTAACTACAATGAGAAGTTCAAG...GGCAAGGCAACACTGACTGCAGACAAATCCTCCAGCACTGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-15", "curational_tags": null }, { "allele_description_id": "OGRDB:A02232", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-BXDJ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-BXDJ*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGCCAAGGCCTTGAGTGGATTGGAAGGATTCATCCTTCTGATAGTGATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGCCAAGGCCTTGAGTGGATTGGAAGGATTCATCCTTCTGATAGTGATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-27" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGCCAAGGCCTTGAGTGGATTGGAAGGATTCATCCTTCTGATAGTGATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAACTGGTGAAGCCTGGGGCTTCAGTGAAGGTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGCCAAGGCCTTGAGTGGATTGGAAGGATTCATCCTTCT......GATAGTGATACTAACTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-27", "curational_tags": null }, { "allele_description_id": "OGRDB:A02280", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-CDKQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-CDKQ*00", "sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGA", "coding_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTGGCATATAGTATCTACTATGCAGACACTGTGACGGGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGA", "aligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTGACTACGGAATGGCGTGGGTTCGACAGGCTCCAAGGAAGGGGCCTGAGTGGGTAGCATTCATTAGTAATTTG......GCATATAGTATCTACTATGCAGACACTGTGACG...GGCCGATTCACCATCTCTAGAGAGAATGCCAAGAACACCCTGTACCTGGAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02287", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-DVNZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-DVNZ*00", "sequence": "GAGGTGAAGCTGGTGGAATCTGGAGGAGGCTTGGTACAGTCTGGGCGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCAGTGATTTCTACATGGAGTGGGTCCGCCAAGCTCCAGGGAAGGGACTGGAGTGGATTGCTGCAAGTAGAAACAAAGCTAATGATTATACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCATCGTCTCCAGAGACACTTCCCAAAGCATCCTCTACCTTCAGATGAATGCCCTGAGAGCTGAGGACACTGCCATTTATTACTGTGCAAGA", "coding_sequence": "GAGGTGAAGCTGGTGGAATCTGGAGGAGGCTTGGTACAGTCTGGGCGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCAGTGATTTCTACATGGAGTGGGTCCGCCAAGCTCCAGGGAAGGGACTGGAGTGGATTGCTGCAAGTAGAAACAAAGCTAATGATTATACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCATCGTCTCCAGAGACACTTCCCAAAGCATCCTCTACCTTCAGATGAATGCCCTGAGAGCTGAGGACACTGCCATTTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV7-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 300, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGTGGAATCTGGAGGAGGCTTGGTACAGTCTGGGCGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTCAGTGATTTCTACATGGAGTGGGTCCGCCAAGCTCCAGGGAAGGGACTGGAGTGGATTGCTGCAAGTAGAAACAAAGCTAATGATTATACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCATCGTCTCCAGAGACACTTCCCAAAGCATCCTCTACCTTCAGATGAATGCCCTGAGAGCTGAGGACACTGCCATTTATTACTGTGCAAGA", "aligned_sequence": "GAGGTGAAGCTGGTGGAATCTGGAGGA...GGCTTGGTACAGTCTGGGCGTTCTCTGAGACTCTCCTGTGCAACTTCTGGGTTCACCTTC............AGTGATTTCTACATGGAGTGGGTCCGCCAAGCTCCAGGGAAGGGACTGGAGTGGATTGCTGCAAGTAGAAACAAAGCTAATGATTATACAACAGAGTACAGTGCATCTGTGAAG...GGTCGGTTCATCGTCTCCAGAGACACTTCCCAAAGCATCCTCTACCTTCAGATGAATGCCCTGAGAGCTGAGGACACTGCCATTTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV7-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02268", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-DYDA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-DYDA*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGATGGAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCGTCTCAGGGTTCTCATTA............ACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGAGTGAT.........GGAAGCACAACCTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02223", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-E5EW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-E5EW*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGGATTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAATGGATTGGTAACATTTACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGGATTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAATGGATTGGTAACATTTACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-19" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGGATTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAATGGATTGGTAACATTTACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGGATTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAATGGATTGGTAACATTTACCCTTCT......GATAGTGAAACTCACTACAATCAAAAGTTCAAG...GACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-19", "curational_tags": null }, { "allele_description_id": "OGRDB:A02271", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ECGZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ECGZ*00", "sequence": "CAGGTACAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "coding_sequence": "CAGGTACAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTACAACTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTAACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTTTCATGTCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "aligned_sequence": "CAGGTACAACTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATTACCTGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGATATAAGCTGGATTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGT.........GGAGGCACAAATTATAATTCAGCTTTCATG...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATATATTACTGTGTA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02291", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ED7H.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ED7H*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTAATATGGGTATAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTAGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCAAA", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTAATATGGGTATAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTAGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCAAA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV8-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTCTAATATGGGTATAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTAGAGTGGCTGGCACACATTTGGTGGAATGATGATAAGTACTATAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCAAA", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTCTAATATGGGTATAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTAGAGTGGCTGGCACACATTTGGTGGAAT.........GATGATAAGTACTATAACCCATCCCTGAAG...AGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATACTACTGTGCTCAAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV8-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02227", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-EH6M.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-EH6M*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-22" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAATAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTAAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACTTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAATGATTCATCCTAAT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-22", "curational_tags": null }, { "allele_description_id": "OGRDB:A02288", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-F3ON.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-F3ON*00", "sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCA", "coding_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV7-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGAGGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTCACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAGGGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCA", "aligned_sequence": "GAGGTGAAGCTGGTGGAGTCTGGAGGA...GGCTTGGTACAGCCTGGGGGTTCTCTGAGTCTCTCCTGTGCAGCTTCTGGATTCACCTTC............ACTGATTACTACATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGCACTTGAGTGGTTGGGTTTTATTAGAAACAAAGCTAATGGTTACACAACAGAGTACAGTGCATCTGTGAAG...GGTCGGTTCACCATCTCCAGAGATAATTCCCAAAGCATCCTCTATCTTCAAATGAATGCCCTGAGAGCTGAGGACAGTGCCACTTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV7-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02286", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-FCI2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FCI2*00", "sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCACTTTTAGTGACGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGAAACAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGT", "coding_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCACTTTTAGTGACGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGAAACAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV6-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGAGGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCACTTTTAGTGACGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGAAACAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAAGGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGT", "aligned_sequence": "GAAGTGAAGCTTGAGGAGTCTGGAGGA...GGCTTGGTGCAACCTGGAGGATCCATGAAACTCTCTTGTGCTGCCTCTGGATTCACTTTT............AGTGACGCCTGGATGGACTGGGTCCGCCAGTCTCCAGAGAAGGGGCTTGAGTGGGTTGCTGAAATTAGAAACAAAGCTAATAATCATGCAACATACTATGCTGAGTCTGTGAAA...GGGAGGTTCACCATCTCAAGAGATGATTCCAAAAGTAGTGTCTACCTGCAAATGAACAGCTTAAGAGCTGAAGACACTGGCATTTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV6-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02260", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-FFB3.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FFB3*00", "sequence": "CAGGTTCACCTACAACAGTCTGGTTCTGAACTGAGGAGTCCTGGGTCTTCAGTAAAGCTGTCATGCAAGGATTTTGATTCAGAAGTCTTCCCTATTGCTTATATGAGTTGGGTAAGGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGGCATACTCCCAAGTATTGGTAGAACAATCTATGGAGAGAAGTTTGAGGACAAAGCCACATTGGATGCAGACACACTGTCCAACACAGCCTACTTGGAGCTCAACAGTCTGACATCCGAGGACTCTGCTATCTACTACTGTGCAAGG", "coding_sequence": "CAGGTTCACCTACAACAGTCTGGTTCTGAACTGAGGAGTCCTGGGTCTTCAGTAAAGCTGTCATGCAAGGATTTTGATTCAGAAGTCTTCCCTATTGCTTATATGAGTTGGGTAAGGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGGCATACTCCCAAGTATTGGTAGAACAATCTATGGAGAGAAGTTTGAGGACAAAGCCACATTGGATGCAGACACACTGTCCAACACAGCCTACTTGGAGCTCAACAGTCTGACATCCGAGGACTCTGCTATCTACTACTGTGCAAGG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV15-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCACCTACAACAGTCTGGTTCTGAACTGAGGAGTCCTGGGTCTTCAGTAAAGCTGTCATGCAAGGATTTTGATTCAGAAGTCTTCCCTATTGCTTATATGAGTTGGGTAAGGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGGCATACTCCCAAGTATTGGTAGAACAATCTATGGAGAGAAGTTTGAGGACAAAGCCACATTGGATGCAGACACACTGTCCAACACAGCCTACTTGGAGCTCAACAGTCTGACATCCGAGGACTCTGCTATCTACTACTGTGCAAGG", "aligned_sequence": "CAGGTTCACCTACAACAGTCTGGTTCT...GAACTGAGGAGTCCTGGGTCTTCAGTAAAGCTGTCATGCAAGGATTTTGATTCAGAAGTCTTC.........CCTATTGCTTATATGAGTTGGGTAAGGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGGCATACTCCCAAGT......ATTGGTAGAACAATCTATGGAGAGAAGTTTGAG...GACAAAGCCACATTGGATGCAGACACACTGTCCAACACAGCCTACTTGGAGCTCAACAGTCTGACATCCGAGGACTCTGCTATCTACTACTGTGCAAGG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV15-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02274", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-FPG7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-FPG7*00", "sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCTTCTGGATTCACTTTCAGTAACTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTCCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAA", "coding_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCTTCTGGATTCACTTTCAGTAACTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTCCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCTTCTGGATTCACTTTCAGTAACTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTGAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTCCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAA", "aligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCTTCTGGATTCACTTTC............AGTAACTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGT......GGTGGTAGCACCTACTATCCAGACAGTGTGAAG...GGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTCCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCATGTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02251", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-G6NA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-G6NA*00", "sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGATCATTGAAACTCTCATGTGCCGCCTCTGGTTTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAGTAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACCTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "coding_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGATCATTGAAACTCTCATGTGCCGCCTCTGGTTTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAGTAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACCTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV10-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 296, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGATCATTGAAACTCTCATGTGCCGCCTCTGGTTTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAGTAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACCTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "aligned_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGA...GGATTGGTGCAGCCTAAAGGATCATTGAAACTCTCATGTGCCGCCTCTGGTTTCACCTTC............AATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAGTAATTATGCAACATATTATGCCGATTCAGTGAAA...GACAGATTCACCATCTCCAGAGATGATTCACAAAGCATGCTCTATCTGCAAATGAACAACCTGAAAACTGAGGACACAGCCATGTATTACTGTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV10-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02255", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-GDIS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GDIS*00", "sequence": "CAGGTGCAGCTTGTAGAGACCGGGGGAGGCTTGGTGAGGCCTGGAAATTCTCTGAAACTCTCCTGTGTTACCTCGGGATTCACTTTCAGTAACTACCGGATGCACTGGCTTCGCCAGCCTCCAGGGAAGAGGCTGGAGTGGATTGCTGTAATTACAGTCAAATCTGATAATTATGGAGCAAATTATGCAGAGTCTGTGAAAGGCAGATTCGCCATTTCAAGAGATGATTCAAAAAGCAGTGTCTACCTAGAGATGAACAGATTAAGAGAGGAAGACACTGCCACTTATTTTTGTAGT", "coding_sequence": "CAGGTGCAGCTTGTAGAGACCGGGGGAGGCTTGGTGAGGCCTGGAAATTCTCTGAAACTCTCCTGTGTTACCTCGGGATTCACTTTCAGTAACTACCGGATGCACTGGCTTCGCCAGCCTCCAGGGAAGAGGCTGGAGTGGATTGCTGTAATTACAGTCAAATCTGATAATTATGGAGCAAATTATGCAGAGTCTGTGAAAGGCAGATTCGCCATTTCAAGAGATGATTCAAAAAGCAGTGTCTACCTAGAGATGAACAGATTAAGAGAGGAAGACACTGCCACTTATTTTTGTAGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV13-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTTGTAGAGACCGGGGGAGGCTTGGTGAGGCCTGGAAATTCTCTGAAACTCTCCTGTGTTACCTCGGGATTCACTTTCAGTAACTACCGGATGCACTGGCTTCGCCAGCCTCCAGGGAAGAGGCTGGAGTGGATTGCTGTAATTACAGTCAAATCTGATAATTATGGAGCAAATTATGCAGAGTCTGTGAAAGGCAGATTCGCCATTTCAAGAGATGATTCAAAAAGCAGTGTCTACCTAGAGATGAACAGATTAAGAGAGGAAGACACTGCCACTTATTTTTGTAGT", "aligned_sequence": "CAGGTGCAGCTTGTAGAGACCGGGGGA...GGCTTGGTGAGGCCTGGAAATTCTCTGAAACTCTCCTGTGTTACCTCGGGATTCACTTTC............AGTAACTACCGGATGCACTGGCTTCGCCAGCCTCCAGGGAAGAGGCTGGAGTGGATTGCTGTAATTACAGTCAAATCTGATAATTATGGAGCAAATTATGCAGAGTCTGTGAAA...GGCAGATTCGCCATTTCAAGAGATGATTCAAAAAGCAGTGTCTACCTAGAGATGAACAGATTAAGAGAGGAAGACACTGCCACTTATTTTTGTAGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV13-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02257", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-GUKT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GUKT*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTG", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV14-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGGATGGTGAAACTAAATATGCCCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTG", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCA...GAGCTTGTGAAGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTCAACATT............AAAGACTACTATATGCACTGGGTGAAGCAGAGGACTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAG......GATGGTGAAACTAAATATGCCCCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV14-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02269", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-GX2P.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GX2P*00", "sequence": "CAAGTGCAGATGAAGGAGTCAGGACCTGACCTTGTGCAGCCATCACAGACTCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAAGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTGGAATGGTTGGGAGGAATATGGTCTGGTGGAAGCATATACTATACTCCAGCTCTCAGTTCCCGACTGAGTGTCAGCAGGGACATCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGTGTACCACTGTGCCAGATA", "coding_sequence": "CAAGTGCAGATGAAGGAGTCAGGACCTGACCTTGTGCAGCCATCACAGACTCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAAGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTGGAATGGTTGGGAGGAATATGGTCTGGTGGAAGCATATACTATACTCCAGCTCTCAGTTCCCGACTGAGTGTCAGCAGGGACATCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGTGTACCACTGTGCCAGATA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAGTGCAGATGAAGGAGTCAGGACCTGACCTTGTGCAGCCATCACAGACTCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAAGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTGGAATGGTTGGGAGGAATATGGTCTGGTGGAAGCATATACTATACTCCAGCTCTCAGTTCCCGACTGAGTGTCAGCAGGGACATCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGTGTACCACTGTGCCAGATA", "aligned_sequence": "CAAGTGCAGATGAAGGAGTCAGGACCT...GACCTTGTGCAGCCATCACAGACTCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTA............AGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTGGAATGGTTGGGAGGAATATGGTCTGGT.........GGAAGCATATACTATACTCCAGCTCTCAGT...TCCCGACTGAGTGTCAGCAGGGACATCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGTGTACCACTGTGCCAGATA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02216", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-GXHA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-GXHA*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGCTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGCTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-12" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATCGGAGAGATTGATCCTTCTGATAGCTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCAGTGGGTAAAACAGAGGCCTGGACAGGGCCTTGAGTGGATCGGAGAGATTGATCCTTCT......GATAGCTATACTAACTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-12", "curational_tags": null }, { "allele_description_id": "OGRDB:A02220", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-HD6C.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-HD6C*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAACCTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAACCTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-16" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATAACCTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGTAGTGGTAGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATAACCTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGATATTTATCCTGGT......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-16", "curational_tags": null }, { "allele_description_id": "OGRDB:A02265", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-HFF6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-HFF6*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGAAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACA", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGAAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGAAAGCACAACCTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACA", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTA............ACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGAT.........GAAAGCACAACCTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAGACA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02290", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-HGG2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-HGG2*00", "sequence": "CAGGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTACTTCTGGTATGGGTTTGAGCTGGCTTCGTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCAAGCATTTGGAATAATGATAACTACTACAACCCATCTTTGAAGAGCCGGCTCACAATCTCCAAGGAGACCTCCAACTACCAAGTATTCCTTAAACTCACCAGTGTGGACACTGCAGATTCTGCCACATACTACGGTGCTTGGAGAG", "coding_sequence": "CAGGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTACTTCTGGTATGGGTTTGAGCTGGCTTCGTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCAAGCATTTGGAATAATGATAACTACTACAACCCATCTTTGAAGAGCCGGCTCACAATCTCCAAGGAGACCTCCAACTACCAAGTATTCCTTAAACTCACCAGTGTGGACACTGCAGATTCTGCCACATACTACGGTGCTTGGAGAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV8-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 298, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTACTTCTGGTATGGGTTTGAGCTGGCTTCGTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCAAGCATTTGGAATAATGATAACTACTACAACCCATCTTTGAAGAGCCGGCTCACAATCTCCAAGGAGACCTCCAACTACCAAGTATTCCTTAAACTCACCAGTGTGGACACTGCAGATTCTGCCACATACTACGGTGCTTGGAGAG", "aligned_sequence": "CAGGTTACTCTGAAAGTGTCTGGCCCT...GGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGT......ACTTCTGGTATGGGTTTGAGCTGGCTTCGTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCAAGCATTTGGAAT............AATGATAACTACTACAACCCATCTTTGAAG...AGCCGGCTCACAATCTCCAAGGAGACCTCCAACTACCAAGTATTCCTTAAACTCACCAGTGTGGACACTGCAGATTCTGCCACATACTACGGTGCTTGGAGAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV8-2\r\nSecond cysteine not found", "curational_tags": null }, { "allele_description_id": "OGRDB:A02275", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-HQQK.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-HQQK*00", "sequence": "GAAGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGTCTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "coding_sequence": "GAAGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGTCTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-10" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTCGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGCCATGTCTTGGGTTCGCCAGTCTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTAGTTACACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "aligned_sequence": "GAAGTGAAGCTCGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGCCATGTCTTGGGTTCGCCAGTCTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGT......GGTAGTTACACCTACTATCCAGACAGTGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-10", "curational_tags": null }, { "allele_description_id": "OGRDB:A02226", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-I35M.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-I35M*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGT", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-21" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTCACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGAGGTGGTTATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGT", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTAAGGCCTGGGACTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACCTTC............ACTAACTACTGGATAGGTTGGGCAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGATATTTACCCTGGA......GGTGGTTATACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGCCATCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-21", "curational_tags": null }, { "allele_description_id": "OGRDB:A02248", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-IG7Z.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-IG7Z*00", "sequence": "GAGTTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAGTAATTAATCCTAACTATGGTACTACTAGCTACAATCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACCAATCTTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "coding_sequence": "GAGTTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAGTAATTAATCCTAACTATGGTACTACTAGCTACAATCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACCAATCTTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGTTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAGTAATTAATCCTAACTATGGTACTACTAGCTACAATCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACCAATCTTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "aligned_sequence": "GAGTTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGCGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTC............ACTGACTACAACATGAACTGGGTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGAGTAATTAATCCTAAC......TATGGTACTACTAGCTACAATCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACCAATCTTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02241", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-IZIY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-IZIY*00", "sequence": "CAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGCGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "coding_sequence": "CAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGCGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-35" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTCACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGAAGCGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "aligned_sequence": "CAGATCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGCTACACCTTC............ACTGACTACTATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTGGA......AGCGGTAATACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-35", "curational_tags": null }, { "allele_description_id": "OGRDB:A02279", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-JPJZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-JPJZ*00", "sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAGA", "coding_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACACTGTAAAGGGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAGA", "aligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGT......GGTGGTAGCACCTACTATCCAGACACTGTAAAG...GGTCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02263", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-L5FH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-L5FH*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGC", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-11" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGTGGAAGCACAAATTATAATTCAGCTCTCATGTCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGC", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACTTGCACTGTCTCTGGGTTTTCATTA............ACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGGT.........GGAAGCACAAATTATAATTCAGCTCTCATG...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-11", "curational_tags": null }, { "allele_description_id": "OGRDB:A02215", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-LPGR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-LPGR*00", "sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGACTTCTGGCTACACATTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATAGGGGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGACTTCTGGCTACACATTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATAGGGGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-11" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACTGTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGACTTCTGGCTACACATTTACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATAGGGGCTATTTATCCTGGAAATAGTGATACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTCCAGCAGTCTGGGACT...GTGCTGGCAAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGACTTCTGGCTACACATTT............ACCAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATAGGGGCTATTTATCCTGGA......AATAGTGATACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCAAACTGACTGCAGTCACATCCGCCAGCACTGCCTACATGGAGCTCAGCAGCCTGACAAATGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-11", "curational_tags": null }, { "allele_description_id": "OGRDB:A02237", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-LZ4V.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-LZ4V*00", "sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-31" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCTGAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTCACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAACAGTCTGACGCT...GAGTTGGTGAAACCTGGAGCTTCAGTGAAGATATCCTGCAAGGTTTCTGGCTACACCTTC............ACTGACCATACTATTCACTGGATGAAGCAGAGGCCTGAACAGGGCCTGGAATGGATTGGATATATTTATCCTAGA......GATGGTAGTACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAACAGCCTGACATCTGAGGACTCTGCAGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-31", "curational_tags": null }, { "allele_description_id": "OGRDB:A02272", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-LZPN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-LZPN*00", "sequence": "GATGTACAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGATGGTAGCAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCGTGACACATCTAAGAACCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGT", "coding_sequence": "GATGTACAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGATGGTAGCAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCGTGACACATCTAAGAACCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV3-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTACAGCTTCAGGAGTCAGGACCTGGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACCAGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGATGGTAGCAATAACTACAACCCATCTCTCAAAAATCGAATCTCCATCACTCGTGACACATCTAAGAACCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGT", "aligned_sequence": "GATGTACAGCTTCAGGAGTCAGGACCT...GGCCTCGTGAAACCTTCTCAGTCTCTGTCTCTCACCTGCTCTGTCACTGGCTACTCCATCACC.........AGTGGTTATTACTGGAACTGGATCCGGCAGTTTCCAGGAAACAAACTGGAATGGATGGGCTACATAAGCTACGAT.........GGTAGCAATAACTACAACCCATCTCTCAAA...AATCGAATCTCCATCACTCGTGACACATCTAAGAACCAGTTTTTCCTGAAGTTGAATTCTGTGACTACTGAGGACACAGCCACATATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV3-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02270", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-MM42.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-MM42*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCC", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCC", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGCTATAAGCTGGGTTCGCCAGCCACCAGGAAAGGGTCTGGAGTGGCTTGGAGTAATATGGACTGGT.........GGAGGCACAAATTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGTCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCACGTACTACTGTGCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02238", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-MQ2W.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-MQ2W*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAACGGAAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAACGGAAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-32" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTCAGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGAGATGGTGATACTAACTACAACGGAAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAAGCTTCTGGCTACGCATTC............AGTAGCTACTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACAGATTTATCCTGGA......GATGGTGATACTAACTACAACGGAAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACCTCTGAGGACTCTGCGGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-32", "curational_tags": null }, { "allele_description_id": "OGRDB:A02256", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-N46H.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-N46H*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV14-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCAGAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATTAAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAGAATGGTAATACTATATATGACCCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCA...GAGCTTGTGAGGCCAGGGACCTCAGTCAAGTTGTCCTGCAAAGCTTCTGGCTTCAACATT............AAAGACTACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGAAGGATTGATCCTGAG......AATGGTAATACTATATATGACCCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV14-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02239", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-NDA5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NDA5*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGGCGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTATGGTATAAGCTGGGTGAAGCAGAGAACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTAGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCGTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGGCGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTATGGTATAAGCTGGGTGAAGCAGAGAACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTAGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCGTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-33" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGGCGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTATGGTATAAGCTGGGTGAAGCAGAGAACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTAGAAGTGGTAATACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCGTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCT...GAGCTGGCGAGGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACAAGCTATGGTATAAGCTGGGTGAAGCAGAGAACTGGACAGGGCCTTGAGTGGATTGGAGAGATTTATCCTAGA......AGTGGTAATACTTACTACAATGAGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCGTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-33", "curational_tags": null }, { "allele_description_id": "OGRDB:A02278", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-NFUY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NFUY*00", "sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCAACTACTATCCAGACACTGTAAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "coding_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCAACTACTATCCAGACACTGTAAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGTGGTGGTAGCAACTACTATCCAGACACTGTAAAGGGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "aligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAACTATTACATGTATTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTGGGTCGCAGAAATTAGTAGTGGT......GGTGGTAGCAACTACTATCCAGACACTGTAAAG...GGGCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCATGTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02294", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-NLDH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-NLDH*00", "sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "coding_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV9-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTCACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTCGTGCAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGTGTATACCTTC............ACAGAATATCCAATGCACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTCAAGTGGATGGGCTGGATAAACACCTAC......TCTGGAGAGCCAACATATGCTGACGACTTCAAG...GGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV9-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02254", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-OAN5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-OAN5*00", "sequence": "CAGATGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCCTCACAGTCACTCTTCCTTACCTGCTCTATTACTGGTTTCCCCATCACCAGTGGTTACTACTGGATCTGGATCCGTCAGTCACCTGGGAAACCCCTAGAATGGATGGGGTACATCACTCATAGTGGGGAAACTTTCTACAACCCATCTCTCCAGAGCCCCATCTCCATTACTAGAGAAACGTCAAAGAACCAGTTCTTCCTCCAATTGAACTCTGTGACCACAGAGGACACAGCCATGTATTACTGTGCAGGAGAC", "coding_sequence": "CAGATGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCCTCACAGTCACTCTTCCTTACCTGCTCTATTACTGGTTTCCCCATCACCAGTGGTTACTACTGGATCTGGATCCGTCAGTCACCTGGGAAACCCCTAGAATGGATGGGGTACATCACTCATAGTGGGGAAACTTTCTACAACCCATCTCTCCAGAGCCCCATCTCCATTACTAGAGAAACGTCAAAGAACCAGTTCTTCCTCCAATTGAACTCTGTGACCACAGAGGACACAGCCATGTATTACTGTGCAGGAGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV12-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATGCAGCTTCAGGAGTCAGGACCTGGCCTGGTGAAACCCTCACAGTCACTCTTCCTTACCTGCTCTATTACTGGTTTCCCCATCACCAGTGGTTACTACTGGATCTGGATCCGTCAGTCACCTGGGAAACCCCTAGAATGGATGGGGTACATCACTCATAGTGGGGAAACTTTCTACAACCCATCTCTCCAGAGCCCCATCTCCATTACTAGAGAAACGTCAAAGAACCAGTTCTTCCTCCAATTGAACTCTGTGACCACAGAGGACACAGCCATGTATTACTGTGCAGGAGAC", "aligned_sequence": "CAGATGCAGCTTCAGGAGTCAGGACCT...GGCCTGGTGAAACCCTCACAGTCACTCTTCCTTACCTGCTCTATTACTGGTTTCCCCATCACC.........AGTGGTTACTACTGGATCTGGATCCGTCAGTCACCTGGGAAACCCCTAGAATGGATGGGGTACATCACTCATAGT.........GGGGAAACTTTCTACAACCCATCTCTCCAG...AGCCCCATCTCCATTACTAGAGAAACGTCAAAGAACCAGTTCTTCCTCCAATTGAACTCTGTGACCACAGAGGACACAGCCATGTATTACTGTGCAGGAGAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 102, "fwr2_start": 103, "fwr2_end": 153, "cdr2_start": 154, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV12-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02249", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-QLDU.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QLDU*00", "sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGAACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGCCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "coding_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGAACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGCCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGAACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGCACTGGTGGTACTACCTACAACCAGAAGTTCAAGGCCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "aligned_sequence": "GAGGTCCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTC............ACTGGCTACTACATGAACTGGGTGAAGCAAAGTCCTGAAAAGAGCCTTGAGTGGATTGGAGAGATTAATCCTAGC......ACTGGTGGTACTACCTACAACCAGAAGTTCAAG...GCCAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAAGAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02217", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-QZEY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-QZEY*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCATTGGGTGAAGCAGAGGCCTATACAAGGCCTTGAATGGATTGGTAACATTGACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCATTGGGTGAAGCAGAGGCCTATACAAGGCCTTGAATGGATTGGTAACATTGACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-13" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCATTGGGTGAAGCAGAGGCCTATACAAGGCCTTGAATGGATTGGTAACATTGACCCTTCTGATAGTGAAACTCACTACAATCAAAAGTTCAAGGACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAGGCCTGGGTCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCATTGGGTGAAGCAGAGGCCTATACAAGGCCTTGAATGGATTGGTAACATTGACCCTTCT......GATAGTGAAACTCACTACAATCAAAAGTTCAAG...GACAAGGCCACATTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-13", "curational_tags": null }, { "allele_description_id": "OGRDB:A02240", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ROLQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ROLQ*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTACGCATTCAGTAGCTCCTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTACTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTACGCATTCAGTAGCTCCTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTACTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-34" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTACGCATTCAGTAGCTCCTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGAGATGGAGATACTAACTACAATGGGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTACTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGCTACGCATTC............AGTAGCTCCTGGATGAACTGGGTGAAGCAGAGGCCTGGAAAGGGTCTTGAGTGGATTGGACGGATTTATCCTGGA......GATGGAGATACTAACTACAATGGGAAGTTCAAG...GGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAACTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTACTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-34", "curational_tags": null }, { "allele_description_id": "OGRDB:A02282", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-RRWL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-RRWL*00", "sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGC", "coding_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGC", "aligned_sequence": "GAGGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAACTATGGAATGCACTGGGTTCGTCAGGCTCCAGAGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTGGC......AGTAGTACCATCTACTATGCAGACACAGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTTCCTGCAAATGACCAGTCTAAGGTCTGAGGACACGGCCATGTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02247", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-RSWU.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-RSWU*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATATCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATATCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-7" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATATCCTCGATTGGATTGGATATATTTATCCTTACAATGGTGTTTCTAGCTACAACCAGAAATTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGCAAGGCTTCTGGTTACTCATTC............ACTGGCTACTACATGCACTGGGTGAAGCAGAGCCATGGAAATATCCTCGATTGGATTGGATATATTTATCCTTAC......AATGGTGTTTCTAGCTACAACCAGAAATTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCTAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-7", "curational_tags": null }, { "allele_description_id": "OGRDB:A02222", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-S2VX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-S2VX*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTAAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGTGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTAAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGTGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-18" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTGGTGAGGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTAAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGTGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTGGTGAGGCCTGGGACTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTAAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGTGATTGATCCTTCT......GATAGTTATACTAACTACAATCAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-18", "curational_tags": null }, { "allele_description_id": "OGRDB:A02250", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-SAXO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SAXO*00", "sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCAGAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTG", "coding_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCAGAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV10-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGAGGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTCAATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAAGACAGATTCACCATCTCCAGAGATGATTCAGAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTG", "aligned_sequence": "GAGGTGCAGCTTGTTGAGTCTGGTGGA...GGATTGGTGCAGCCTAAAGGGTCATTGAAACTCTCATGTGCAGCCTCTGGATTCAGCTTC............AATACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGTTTGGAATGGGTTGCTCGCATAAGAAGTAAAAGTAATAATTATGCAACATATTATGCCGATTCAGTGAAA...GACAGATTCACCATCTCCAGAGATGATTCAGAAAGCATGCTCTATCTGCAAATGAACAACTTGAAAACTGAGGACACAGCCATGTATTACTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 180, "fwr3_start": 181, "fwr3_end": 294, "cdr3_start": 295, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV10-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02231", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-SEGR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SEGR*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACGAGGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAACCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGTG", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACGAGGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAACCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGTG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-26" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 289, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCTGAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACGAGGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGGTACTAAGTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAACCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGTG", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGGCT...GAGCTTGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACGAGGCCTTGAGTGGATTGGAAGGATTGATCCTAAT......AGTGGTGGTACTAAGTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAACCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGTG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-26", "curational_tags": null }, { "allele_description_id": "OGRDB:A02246", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-SPXV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-SPXV*00", "sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGTAAGGCTTCTGGATACACGTTCACTGACTACTACATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGT", "coding_sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGTAAGGCTTCTGGATACACGTTCACTGACTACTACATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAATCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGTAAGGCTTCTGGATACACGTTCACTGACTACTACATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGT", "aligned_sequence": "GAGGTCCAGCTGCAACAATCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATATCCTGTAAGGCTTCTGGATACACGTTC............ACTGACTACTACATGAACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGAGATATTAATCCTAAC......AATGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCTGAGGACTCTGCAGTCTATTACTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02214", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-TTLL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-TTLL*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGAGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACAGTCTACTTGGAGCTCAGCCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAA", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGAGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACAGTCTACTTGGAGCTCAGCCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-10" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTAGTGAAGCCTGGAGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTACAATGATGATACTAAGTACAATGAAAAGTTCAAGGGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACAGTCTACTTGGAGCTCAGCCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAA", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTAGTGAAGCCTGGAGCCTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTC............ACTACCTATCCTATAGAGTGGATGAAGCAGAATCATGGAAAGAGCCTAGAGTGGATTGGAAATTTTCATCCTTAC......AATGATGATACTAAGTACAATGAAAAGTTCAAG...GGCAAGGCCACATTGACTGTAGAAAAATCCTCTAGCACAGTCTACTTGGAGCTCAGCCGATTAACATCTGATGACTCTGCTGTTTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-10", "curational_tags": null }, { "allele_description_id": "OGRDB:A02264", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-U6BF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-U6BF*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAGCCTATAATTCACCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAATTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAGCCTATAATTCACCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAATTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTAACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGATGGAAGCACAGCCTATAATTCACCTCTCAAATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAATTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACCATCTCAGGGTTCTCATTA............ACCAGCTATGGTGTACACTGGGTTCGCCAGCCTCCAGGAAAGGGTCTGGAGTGGCTGGTAGTGATATGGAGTGAT.........GGAAGCACAGCCTATAATTCACCTCTCAAA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAATTTTCTTAAAAATGAACAGTCTCCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02277", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-U7SL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-U7SL*00", "sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAA", "coding_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGTGGTGGTAGCACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAGGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAA", "aligned_sequence": "GAAGTGCAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGCAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAGAAGAGGCTGGAGTGGGTCGCATACATTAGTAGTGGT......GGTGGTAGCACCTACTATCCAGACAGTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAGGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACGGCCATGTATTACTGTGCAA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02284", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ULSZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ULSZ*00", "sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCTTGTATTACTGTGCA", "coding_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCTTGTATTACTGTGCA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-9" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCTTGTATTACTGTGCA", "aligned_sequence": "GAAGTGATGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAGCCTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATGACATGTCTTGGGTTCGCCAGACTCCAGAGAAGAGGCTGGAGTTGGTCGCAGCCATTAATAGTAAT......GGTGGTAGCACCTACTATCCAGACACTGTGAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCTTGTATTACTGTGCA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-9", "curational_tags": null }, { "allele_description_id": "OGRDB:A02267", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-UTEO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-UTEO*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGTTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGTTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTAACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGTTGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCACTGTCTCTGGGTTCTCATTA............ACCAGCTATGGTGTAGACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGTT.........GGAAGCACAAATTATAATTCAGCTCTCAAA...TCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCCAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02253", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-UYAZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-UYAZ*00", "sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "coding_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV11-2" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "aligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGA...GGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTT............AGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGAT......GGCAGTGCAATAAACTACGCACCATCCATAAAG...GATCGATTCACTATCTTCAGAGACAATGACAAAAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCTGAGGACACAGCCACGTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV11-2", "curational_tags": null }, { "allele_description_id": "OGRDB:A02243", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-V2PN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-V2PN*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-37" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCTGAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTCACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGAAGTGGTAGTACTAACTACAATGAGAAGTTCAAGGGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGAGCT...GAGCTGATGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTACTGGCTACACATTC............ACTGGCTACTGGATAGAGTGGGTAAAGCAGAGGCCTGGACATGGCCTTGAGTGGATTGGAGAGATTTTACCTGGA......AGTGGTAGTACTAACTACAATGAGAAGTTCAAG...GGCAAGGCCACATTCACTGCAGATACATCCTCCAACACAGCCTACATGCAACTCAGCAGCCTGACAACTGAGGACTCTGCCATCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-37", "curational_tags": null }, { "allele_description_id": "OGRDB:A02230", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-VB4F.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VB4F*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTGAGCAGCCTGACATATGAGGACTCTGCAGTCTATTACTGTGCAAGA", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTGAGCAGCCTGACATATGAGGACTCTGCAGTCTATTACTGTGCAAGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-25" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 294, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGGGCTGAACTGGCAAAACCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTTACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGCAGTGGTTATACTAAGTACAATCAGAAGTTCAAGGACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTGAGCAGCCTGACATATGAGGACTCTGCAGTCTATTACTGTGCAAGA", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGGGCT...GAACTGGCAAAACCTGGGGCCTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTT............ACTAGCTACTGGATGCACTGGGTAAAACAGAGGCCTGGACAGGGTCTGGAATGGATTGGATACATTAATCCTAGC......AGTGGTTATACTAAGTACAATCAGAAGTTCAAG...GACAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGCCTACATGCAGCTGAGCAGCCTGACATATGAGGACTCTGCAGTCTATTACTGTGCAAGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-25", "curational_tags": null }, { "allele_description_id": "OGRDB:A02281", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-VDQ4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VDQ4*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGC", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-6" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGAGGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTCAGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGATGGTAGTAGCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGC", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGAGGGA...GGCTTAGTGCAGCCTGGAAGTTCCATGAAACTCTCCTGCACAGCCTCTGGATTCACTTTC............AGTGACTATTACATGGCTTGGGTCCGCCAGGTTCCAGAAAAGGGTCTAGAATGGGTTGCAAACATTAATTATGAT......GGTAGTAGCACCTACTATCTGGACTCCTTGAAG...AGCCGTTTCATCATCTCGAGAGACAATGCAAAGAACATTCTATACCTGCAAATGAGCAGTCTGAAGTCTGAGGACACAGCCACGTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-6", "curational_tags": null }, { "allele_description_id": "OGRDB:A02225", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-VE3A.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VE3A*00", "sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGAC", "coding_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-20" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 295, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCTGAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACTGAGTATACTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGAAGTGGTAGTATAAAGTACAATGAGAAATTCAAGGACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGAC", "aligned_sequence": "CAGGTCCAGCTGCAGCAGTCTGGAGCT...GAGCTGGTGAAACCCGGGGCATCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACTGAGTATACTATACACTGGGTAAAGCAGAGGTCTGGACAGGGTCTTGAGTGGATTGGGTGGTTTTACCCTGGA......AGTGGTAGTATAAAGTACAATGAGAAATTCAAG...GACAAGGCCACATTGACTGCGGACAAATCCTCCAGCACAGTCTATATGGAGCTTAGTAGATTGACATCTGAAGACTCTGCGGTCTATTTCTGTGCAAGAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-20", "curational_tags": null }, { "allele_description_id": "OGRDB:A02252", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-VRCT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-VRCT*00", "sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGT", "coding_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV11-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGAGGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTTAGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGT", "aligned_sequence": "GAAGTGCAGCTGTTGGAGACTGGAGGA...GGCTTGGTGCAACCTGGGGGGTCACGGGGACTCTCTTGTGAAGGCTCAGGGTTCACTTTT............AGTGGCTTCTGGATGAGCTGGGTTCGACAGACACCTGGGAAGACCCTGGAGTGGATTGGAGACATTAATTCTGAT......GGCAGTGCAATAAACTACGCACCATCCATAAAG...GATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAGGACACAGCCACGTATTTCTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV11-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02261", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-WTC5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-WTC5*00", "sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCC", "coding_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-1" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCTGGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTAACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCAGCTTTCATATCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCC", "aligned_sequence": "CAGGTGCAGCTGAAGCAGTCAGGACCT...GGCCTAGTGCAGCCCTCACAGAGCCTGTCCATCACCTGCACAGTCTCTGGTTTCTCATTA............ACTAGCTATGGTGTACACTGGGTTCGCCAGTCTCCAGGAAAGGGTCTGGAGTGGCTGGGAGTGATATGGAGTGGT.........GGAAGCACAGACTATAATGCAGCTTTCATA...TCCAGACTGAGCATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTTAAAATGAACAGTCTGCAAGCTGATGACACAGCCATATACTACTGTGCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-1", "curational_tags": null }, { "allele_description_id": "OGRDB:A02283", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-XWKM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-XWKM*00", "sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAAACTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAG", "coding_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAAACTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAG", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV5-8" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 293, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAAACTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGTGGTAGTTACACCTACTATCCAGACAGTGTAAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAG", "aligned_sequence": "GAAGTGAAGCTGGTGGAGTCTGGGGGA...GGCTTAGTGAAAACTGGAGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGATTCACTTTC............AGTAGCTATTACATGTCTTGGGTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGATGGT......GGTAGTTACACCTACTATCCAGACAGTGTAAAG...GGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACCTGGCCATGTATTACTGTGCAAG", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV5-8", "curational_tags": null }, { "allele_description_id": "OGRDB:A02266", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-YJAL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-YJAL*00", "sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCTCTGTCTCTGGTTTCTCACTAACCAACTCTGGTGTACACTGGGTTCGCCAGCCTCCAAGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGATGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGAATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "coding_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCTCTGTCTCTGGTTTCTCACTAACCAACTCTGGTGTACACTGGGTTCGCCAGCCTCCAAGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGATGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGAATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV2-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCTGGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCTCTGTCTCTGGTTTCTCACTAACCAACTCTGGTGTACACTGGGTTCGCCAGCCTCCAAGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGATGGAAGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGAATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "aligned_sequence": "CAGGTGCAGCTGAAGGAGTCAGGACCT...GGCCTGGTGGCGCCCTCACAGAGCCTGTCCATCACATGCTCTGTCTCTGGTTTCTCACTA............ACCAACTCTGGTGTACACTGGGTTCGCCAGCCTCCAAGAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGGTGAT.........GGAAGCACAAATTATAATTCAGCTCTCAAA...TCCAGACTGAGAATCAGCAAGGACAACTCCAAGAGCCAAGTTTTCTTAAAAATGAACAGTCTGCAAACTGATGACACAGCCATGTACTACTGTGCC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 285, "cdr3_start": 286, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV2-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02245", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-YU7L.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-YU7L*00", "sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAACCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAAACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCGGAGGATTCTGCAGTCTATTACTGTGC", "coding_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAACCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAAACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCGGAGGATTCTGCAGTCTATTACTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-5" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTCACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAACCCTAACAATGGTGGTACTAGCTACAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAAACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCGGAGGATTCTGCAGTCTATTACTGTGC", "aligned_sequence": "GAGGTCCAGCTGCAACAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGATACACATTC............ACTGACTACAACATGCACTGGGTGAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATATTAACCCTAAC......AATGGTGGTACTAGCTACAACCAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAAACAAGTCCTCCAGCACAGCCTACATGGAGCTCCGCAGCCTGACATCGGAGGATTCTGCAGTCTATTACTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-5", "curational_tags": null }, { "allele_description_id": "OGRDB:A02259", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-YUES.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-YUES*00", "sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAC", "coding_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV14-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCTGAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATTAAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAGAATGGTGATACTGAATATGCCTCGAAGTTCCAGGGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAC", "aligned_sequence": "GAGGTTCAGCTGCAGCAGTCTGGGGCT...GAGCTTGTGAGGCCAGGGGCCTCAGTCAAGTTGTCCTGCACAGCTTCTGGCTTTAACATT............AAAGACGACTATATGCACTGGGTGAAGCAGAGGCCTGAACAGGGCCTGGAGTGGATTGGATGGATTGATCCTGAG......AATGGTGATACTGAATATGCCTCGAAGTTCCAG...GGCAAGGCCACTATAACAGCAGACACATCCTCCAACACAGCCTACCTGCAGCTCAGCAGCCTGACATCTGAGGACACTGCCGTCTATTACTGTAC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV14-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02292", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-YWSQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-YWSQ*00", "sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTTTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCAGCCCTGAAGAGTCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAATGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "coding_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTTTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCAGCCCTGAAGAGTCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAATGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV8-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 297, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGCACTTTTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGATGATGATAAGTACTATAACCCAGCCCTGAAGAGTCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAATGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "aligned_sequence": "CAGGTTACTCTGAAAGAGTCTGGCCCT...GGGATATTGCAGCCCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAGC......ACTTTTGGTATGGGTGTAGGCTGGATTCGTCAGCCTTCAGGGAAGGGTCTGGAGTGGCTGGCACACATTTGGTGGGAT.........GATGATAAGTACTATAACCCAGCCCTGAAG...AGTCGGCTCACAATCTCCAAGGATACCTCCAAAAACCAGGTATTCCTCAAGATCGCCAATGTGGACACTGCAGATACTGCCACATACTACTGTGCTCGA", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 105, "fwr2_start": 106, "fwr2_end": 156, "cdr2_start": 157, "cdr2_end": 177, "fwr3_start": 178, "fwr3_end": 291, "cdr3_start": 292, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV8-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02242", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-Z2FG.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-Z2FG*00", "sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "coding_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-36" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCTGAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "aligned_sequence": "CAGGTTCAGCTGCAGCAGTCTGGACCT...GAGCTGGTGAAGCCTGGGGCTTCAGTGAAGTTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACAAGCTACGATATAAACTGGGTGAAGCAGAGGCCTGGACAGGGACTTGAGTGGATTGGATGGATTTATCCTAGA......GATGGTAGTACTAAGTACAATGAGAAGTTCAAG...GGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGCGTACATGGAGCTCCACAGCCTGACATCTGAGGACTCTGCGGTCTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-36", "curational_tags": null }, { "allele_description_id": "OGRDB:A02296", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ZCV3.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZCV3*00", "sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACTGCTGGAATGCAGTGGGTGCAAAAGATGCCAGGAAAGGGTTTTAAGTGGATTGGCTGGATAAACACCCACTCTGGAGAGCCAAAATATGCAGAAGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTACAGATAAGCAACCTCAAAAATGAGGACACGGCTACGTATTTCTGTGC", "coding_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACTGCTGGAATGCAGTGGGTGCAAAAGATGCCAGGAAAGGGTTTTAAGTGGATTGGCTGGATAAACACCCACTCTGGAGAGCCAAAATATGCAGAAGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTACAGATAAGCAACCTCAAAAATGAGGACACGGCTACGTATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV9-4" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACTGCTGGAATGCAGTGGGTGCAAAAGATGCCAGGAAAGGGTTTTAAGTGGATTGGCTGGATAAACACCCACTCTGGAGAGCCAAAATATGCAGAAGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTACAGATAAGCAACCTCAAAAATGAGGACACGGCTACGTATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTGGTGCAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTC............ACAACTGCTGGAATGCAGTGGGTGCAAAAGATGCCAGGAAAGGGTTTTAAGTGGATTGGCTGGATAAACACCCAC......TCTGGAGAGCCAAAATATGCAGAAGACTTCAAG...GGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTACAGATAAGCAACCTCAAAAATGAGGACACGGCTACGTATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV9-4", "curational_tags": null }, { "allele_description_id": "OGRDB:A02295", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ZQBW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZQBW*00", "sequence": "CAGATCCAGTTGGTACAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACCTATGGAATGAGCTGGGTGAAACAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACTCTGGAGTGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "coding_sequence": "CAGATCCAGTTGGTACAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACCTATGGAATGAGCTGGGTGAAACAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACTCTGGAGTGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV9-3" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 290, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATCCAGTTGGTACAGTCTGGACCTGAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTCACAACCTATGGAATGAGCTGGGTGAAACAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTACTCTGGAGTGCCAACATATGCTGATGACTTCAAGGGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "aligned_sequence": "CAGATCCAGTTGGTACAGTCTGGACCT...GAGCTGAAGAAGCCTGGAGAGACAGTCAAGATCTCCTGCAAGGCTTCTGGGTATACCTTC............ACAACCTATGGAATGAGCTGGGTGAAACAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACCTAC......TCTGGAGTGCCAACATATGCTGATGACTTCAAG...GGACGGTTTGCCTTCTCTTTGGAAACCTCTGCCAGCACTGCCTATTTGCAGATCAACAACCTCAAAAATGAGGACACGGCTACATATTTCTGTGC", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV9-3", "curational_tags": null }, { "allele_description_id": "OGRDB:A02218", "allele_description_ref": "OGRDB:Mus musculus/MSM/MsJ_IGH:IGHV-ZWCI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "15-May-2022", "release_description": "First release", "label": "IGHV0-ZWCI*00", "sequence": "CAGGTCCAACTGCAGCAGCCTGGGACTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAGCAATGGTGGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "coding_sequence": "CAGGTCCAACTGCAGCAGCCTGGGACTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAGCAATGGTGGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "ext_3prime": null, "aliases": [ "watson_et_al:MSM_MsJ_IGHV1-14" ], "locus": "IGH", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "MSM/MsJ", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGACTGAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAGCAATGGTGGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "aligned_sequence": "CAGGTCCAACTGCAGCAGCCTGGGACT...GAACTGGTGAAGCCTGGGGCTTCAGTGAAGCTGTCCTGCAAGGCTTCTGGCTACACCTTC............ACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAAATATTAATCCTAGC......AATGGTGGTACTAACTACAATGAGAAGTTCAAG...AGCAAGGCCACACTGACTGTAGACAAATCCTCCAGCACAGCCTACATGCAGCTCAGCAGCCTGACATCTGAGGACTCTGCGGTCTATTATTGT", "fwr1_start": 1, "fwr1_end": 75, "cdr1_start": 76, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 288, "cdr3_start": 289, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nwatson_et_al: MSM_MsJ_IGHV1-14", "curational_tags": null } ], "curation": "The germline set is based on sequences published in Watson et al. (2019) (DOI: 10.1111/imcb.12288)" } ] }