{ "GermlineSet": [ { "germline_set_id": "OGRDB:G00028", "author": "Justin Kos", "lab_name": "University of Louisville School of Medicine", "lab_address": "University of Louisville, Louisville, KY 40202, USA", "acknowledgements": null, "release_version": 1, "release_description": "IGKV sequences as described in Kos et al. (2022)", "release_date": "2022-05-03", "germline_set_name": "AKR/J IGKV", "germline_set_ref": "OGRDB:AKR/J IGKV.1", "pub_ids": null, "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "locus": "IGK", "allele_descriptions": [ { "allele_description_id": "OGRDB:A01662", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-27KA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-27KA*00", "sequence": "CAAATTGTTCTCTCCCAGTCTCCAGCAATCCTGTCTGCATCTCCAGGGGAGAAGGTCACAATGACTTGCAGGGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACCCTGGATTTATGCCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGAGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTAACCCACCCA", "coding_sequence": "CAAATTGTTCTCTCCCAGTCTCCAGCAATCCTGTCTGCATCTCCAGGGGAGAAGGTCACAATGACTTGCAGGGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACCCTGGATTTATGCCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGAGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTAACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-72*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCTCCCAGTCTCCAGCAATCCTGTCTGCATCTCCAGGGGAGAAGGTCACAATGACTTGCAGGGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACCCTGGATTTATGCCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGAGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTAACCCACCCA", "aligned_sequence": "CAAATTGTTCTCTCCCAGTCTCCAGCAATCCTGTCTGCATCTCCAGGGGAGAAGGTCACAATGACTTGCAGGGCCAGCTCAAGTGTA.....................AGTTACATGCACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACCCTGGATTTATGCCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGAGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTAACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01625", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-2NZ7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-2NZ7*00", "sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGACATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACTATCAGCAACCTGGAACAAGAAGATATTGCCACTTACTTTTGCCAACAGGATAGTAAGCATCCTCC", "coding_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGACATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACTATCAGCAACCTGGAACAAGAAGATATTGCCACTTACTTTTGCCAACAGGATAGTAAGCATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV10-96*03_S5544_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGACATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACTATCAGCAACCTGGAACAAGAAGATATTGCCACTTACTTTTGCCAACAGGATAGTAAGCATCCTCC", "aligned_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGACATT..................AGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACA.....................TCAAGATTACACTCAGGAGTCCCA...TCAAGGTTCAGTGGCAGTGGG......TCTGGGACAGATTATTCTCTCACTATCAGCAACCTGGAACAAGAAGATATTGCCACTTACTTTTGCCAACAGGATAGTAAGCATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01627", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-2TUW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-2TUW*00", "sequence": "GACATCCTGATGACCCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGAAACAGTCAGTCTTTCCTGTAGGGCCAGCCAGAATACTTACAAGAACCTACACTGGTATCAACAGAAATCACATGGGACTCCAAAGCTTCTCATCAAGTATGCATCTGATCCCATCTCTGGGATCCCCTCCAGGTTCACTGGCAGTGGATCAGGGACAGATTACACTCTCAGTATCAACAGTGTGAAGCCCGAAGATGAAGGAATATATTACTGTCTTCAAGGTTACAGCATGCCT", "coding_sequence": "GACATCCTGATGACCCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGAAACAGTCAGTCTTTCCTGTAGGGCCAGCCAGAATACTTACAAGAACCTACACTGGTATCAACAGAAATCACATGGGACTCCAAAGCTTCTCATCAAGTATGCATCTGATCCCATCTCTGGGATCCCCTCCAGGTTCACTGGCAGTGGATCAGGGACAGATTACACTCTCAGTATCAACAGTGTGAAGCCCGAAGATGAAGGAATATATTACTGTCTTCAAGGTTACAGCATGCCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV5-37*01_S9729_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 285, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCTGATGACCCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGAAACAGTCAGTCTTTCCTGTAGGGCCAGCCAGAATACTTACAAGAACCTACACTGGTATCAACAGAAATCACATGGGACTCCAAAGCTTCTCATCAAGTATGCATCTGATCCCATCTCTGGGATCCCCTCCAGGTTCACTGGCAGTGGATCAGGGACAGATTACACTCTCAGTATCAACAGTGTGAAGCCCGAAGATGAAGGAATATATTACTGTCTTCAAGGTTACAGCATGCCT", "aligned_sequence": "GACATCCTGATGACCCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGAAACAGTCAGTCTTTCCTGTAGGGCCAGCCAGAATACT..................TACAAGAACCTACACTGGTATCAACAGAAATCACATGGGACTCCAAAGCTTCTCATCAAGTATGCA.....................TCTGATCCCATCTCTGGGATCCCC...TCCAGGTTCACTGGCAGTGGA......TCAGGGACAGATTACACTCTCAGTATCAACAGTGTGAAGCCCGAAGATGAAGGAATATATTACTGTCTTCAAGGTTACAGCATGCCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01644", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-5KJT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-5KJT*00", "sequence": "GATGTTGTTCTGACCCAAACTCCACTCTCTCTGCCTGTCAATATTGGAGATCAAGCCTCTATCTCTTGCAAGTCTACTAAGAGCCTTCTGAATAGTGATGGATTCACTTATTTGGGCTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATATATTTGGTTTCTAATCGATTTTCTGGAGTTCCAGACAGGTTCAGTGGTAGTGGGTCAGGGACAGATTTCACCCTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTTCCAGAGTAACTATCTTCCTCT", "coding_sequence": "GATGTTGTTCTGACCCAAACTCCACTCTCTCTGCCTGTCAATATTGGAGATCAAGCCTCTATCTCTTGCAAGTCTACTAAGAGCCTTCTGAATAGTGATGGATTCACTTATTTGGGCTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATATATTTGGTTTCTAATCGATTTTCTGGAGTTCCAGACAGGTTCAGTGGTAGTGGGTCAGGGACAGATTTCACCCTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTTCCAGAGTAACTATCTTCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-99*01_S3206_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTTCTGACCCAAACTCCACTCTCTCTGCCTGTCAATATTGGAGATCAAGCCTCTATCTCTTGCAAGTCTACTAAGAGCCTTCTGAATAGTGATGGATTCACTTATTTGGGCTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATATATTTGGTTTCTAATCGATTTTCTGGAGTTCCAGACAGGTTCAGTGGTAGTGGGTCAGGGACAGATTTCACCCTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTTCCAGAGTAACTATCTTCCTCT", "aligned_sequence": "GATGTTGTTCTGACCCAAACTCCACTCTCTCTGCCTGTCAATATTGGAGATCAAGCCTCTATCTCTTGCAAGTCTACTAAGAGCCTTCTGAATAGT...GATGGATTCACTTATTTGGGCTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATATATTTGGTT.....................TCTAATCGATTTTCTGGAGTTCCA...GACAGGTTCAGTGGTAGTGGG......TCAGGGACAGATTTCACCCTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTTCCAGAGTAACTATCTTCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01643", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-5LR4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-5LR4*00", "sequence": "GATGTCCAGATGATTCAGTCTCCATCCTCCCTGTCTGCATCTTTGGGAGACATAGTCACCATGACTTGCCAGGCAAGTCAGGGCACTAGCATTAATTTAAACTGGTTTCAGCAAAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGGTGCAAGCAACTTGGAAGATGGGGTCCCATCAAGGTTCAGTGGCAGTAGATATGGGACAGATTTCACTCTCACCATCAGCAGCCTGGAGGATGAAGATATGGCAACTTATTTCTGTCTACAGCATAGTTATCTCCCTCC", "coding_sequence": "GATGTCCAGATGATTCAGTCTCCATCCTCCCTGTCTGCATCTTTGGGAGACATAGTCACCATGACTTGCCAGGCAAGTCAGGGCACTAGCATTAATTTAAACTGGTTTCAGCAAAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGGTGCAAGCAACTTGGAAGATGGGGTCCCATCAAGGTTCAGTGGCAGTAGATATGGGACAGATTTCACTCTCACCATCAGCAGCCTGGAGGATGAAGATATGGCAACTTATTTCTGTCTACAGCATAGTTATCTCCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV11-125*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTCCAGATGATTCAGTCTCCATCCTCCCTGTCTGCATCTTTGGGAGACATAGTCACCATGACTTGCCAGGCAAGTCAGGGCACTAGCATTAATTTAAACTGGTTTCAGCAAAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGGTGCAAGCAACTTGGAAGATGGGGTCCCATCAAGGTTCAGTGGCAGTAGATATGGGACAGATTTCACTCTCACCATCAGCAGCCTGGAGGATGAAGATATGGCAACTTATTTCTGTCTACAGCATAGTTATCTCCCTCC", "aligned_sequence": "GATGTCCAGATGATTCAGTCTCCATCCTCCCTGTCTGCATCTTTGGGAGACATAGTCACCATGACTTGCCAGGCAAGTCAGGGCACT..................AGCATTAATTTAAACTGGTTTCAGCAAAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGGTGCA.....................AGCAACTTGGAAGATGGGGTCCCA...TCAAGGTTCAGTGGCAGTAGA......TATGGGACAGATTTCACTCTCACCATCAGCAGCCTGGAGGATGAAGATATGGCAACTTATTTCTGTCTACAGCATAGTTATCTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01651", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-5R5X.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-5R5X*00", "sequence": "GATGTTGTGGTGACTCAAACTCCACTCTCCCTGCCTGTCAGCTTTGGAGATCAAGTTTCTATCTCTTGCAGGTCTAGTCAGAGTCTTGCAAACAGTTATGGGAACACCTATTTGTCTTGGTACCTGCACAAGCCTGGCCAGTCTCCACAGCTCCTCATCTATGGGATTTCCAACAGATTTTCCGGGGTGCCAGACAGGTTCAGTGGCAGTGGTTCAGGGACAGATTTCACACTCAAGATCAGCACAATAAAGCCTGAGGACTTGGGAATGTATTACTGCTTACAAGGTACACATCAGCCTCC", "coding_sequence": "GATGTTGTGGTGACTCAAACTCCACTCTCCCTGCCTGTCAGCTTTGGAGATCAAGTTTCTATCTCTTGCAGGTCTAGTCAGAGTCTTGCAAACAGTTATGGGAACACCTATTTGTCTTGGTACCTGCACAAGCCTGGCCAGTCTCCACAGCTCCTCATCTATGGGATTTCCAACAGATTTTCCGGGGTGCCAGACAGGTTCAGTGGCAGTGGTTCAGGGACAGATTTCACACTCAAGATCAGCACAATAAAGCCTGAGGACTTGGGAATGTATTACTGCTTACAAGGTACACATCAGCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-88*01_S0716_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGGTGACTCAAACTCCACTCTCCCTGCCTGTCAGCTTTGGAGATCAAGTTTCTATCTCTTGCAGGTCTAGTCAGAGTCTTGCAAACAGTTATGGGAACACCTATTTGTCTTGGTACCTGCACAAGCCTGGCCAGTCTCCACAGCTCCTCATCTATGGGATTTCCAACAGATTTTCCGGGGTGCCAGACAGGTTCAGTGGCAGTGGTTCAGGGACAGATTTCACACTCAAGATCAGCACAATAAAGCCTGAGGACTTGGGAATGTATTACTGCTTACAAGGTACACATCAGCCTCC", "aligned_sequence": "GATGTTGTGGTGACTCAAACTCCACTCTCCCTGCCTGTCAGCTTTGGAGATCAAGTTTCTATCTCTTGCAGGTCTAGTCAGAGTCTTGCAAACAGT...TATGGGAACACCTATTTGTCTTGGTACCTGCACAAGCCTGGCCAGTCTCCACAGCTCCTCATCTATGGGATT.....................TCCAACAGATTTTCCGGGGTGCCA...GACAGGTTCAGTGGCAGTGGT......TCAGGGACAGATTTCACACTCAAGATCAGCACAATAAAGCCTGAGGACTTGGGAATGTATTACTGCTTACAAGGTACACATCAGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01583", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-6AZV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-6AZV*00", "sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCCATCTCTTGCAAGTCAAGTCAGAGCCTCTTAGATAGTGATGGAAAGACATATTTGAATTGGTTGTTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTGGCAAGGTACACATTTTCCTCA", "coding_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCCATCTCTTGCAAGTCAAGTCAGAGCCTCTTAGATAGTGATGGAAAGACATATTTGAATTGGTTGTTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTGGCAAGGTACACATTTTCCTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-135*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCCATCTCTTGCAAGTCAAGTCAGAGCCTCTTAGATAGTGATGGAAAGACATATTTGAATTGGTTGTTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTGGCAAGGTACACATTTTCCTCA", "aligned_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCCATCTCTTGCAAGTCAAGTCAGAGCCTCTTAGATAGT...GATGGAAAGACATATTTGAATTGGTTGTTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTG.....................TCTAAACTGGACTCTGGAGTCCCT...GACAGGTTCACTGGCAGTGGA......TCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTATTGCTGGCAAGGTACACATTTTCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01628", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-75SV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-75SV*00", "sequence": "GACATCAAGATGACCCAGTCTCCATCTTCCATGTATGCATCTCTAGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAATAGCTATTTAAGCTGGTTCCAGCAGAAACCAGGGAAATCTCCTAAGACCCTGATCTATCGTGCAAACAGATTGGTAGATGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTCACCATCAGCAGCCTGGAGTATGAAGATATGGGAATTTATTATTGTCTACAGTATGATGAGTTTCCTCC", "coding_sequence": "GACATCAAGATGACCCAGTCTCCATCTTCCATGTATGCATCTCTAGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAATAGCTATTTAAGCTGGTTCCAGCAGAAACCAGGGAAATCTCCTAAGACCCTGATCTATCGTGCAAACAGATTGGTAGATGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTCACCATCAGCAGCCTGGAGTATGAAGATATGGGAATTTATTATTGTCTACAGTATGATGAGTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV14-111*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCAAGATGACCCAGTCTCCATCTTCCATGTATGCATCTCTAGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAATAGCTATTTAAGCTGGTTCCAGCAGAAACCAGGGAAATCTCCTAAGACCCTGATCTATCGTGCAAACAGATTGGTAGATGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTCACCATCAGCAGCCTGGAGTATGAAGATATGGGAATTTATTATTGTCTACAGTATGATGAGTTTCCTCC", "aligned_sequence": "GACATCAAGATGACCCAGTCTCCATCTTCCATGTATGCATCTCTAGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATT..................AATAGCTATTTAAGCTGGTTCCAGCAGAAACCAGGGAAATCTCCTAAGACCCTGATCTATCGTGCA.....................AACAGATTGGTAGATGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGGCAAGATTATTCTCTCACCATCAGCAGCCTGGAGTATGAAGATATGGGAATTTATTATTGTCTACAGTATGATGAGTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01623", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-7CP5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-7CP5*00", "sequence": "GATGTCCAGATAACCCAGTCTCCATCTTATCTTGCTGCATCTCCTGGAGAAACCATTACTATTAATTGCAGGGCAAGTAAGAGCATTAGCAAATATTTAGCCTGGTATCAAGAGAAACCTGGGAAAACTAATAAGCTTCTTATCTACTCTGGATCCACTTTGCAATCTGGAATTCCATCAAGGTTCAGTGGCAGTGGATCTGGTACAGATTTCACTCTCACCATCAGTAGCCTGGAGCCTGAAGATTTTGCAATGTATTACTGTCAACAGCATAATGAATACCCGTAC", "coding_sequence": "GATGTCCAGATAACCCAGTCTCCATCTTATCTTGCTGCATCTCCTGGAGAAACCATTACTATTAATTGCAGGGCAAGTAAGAGCATTAGCAAATATTTAGCCTGGTATCAAGAGAAACCTGGGAAAACTAATAAGCTTCTTATCTACTCTGGATCCACTTTGCAATCTGGAATTCCATCAAGGTTCAGTGGCAGTGGATCTGGTACAGATTTCACTCTCACCATCAGTAGCCTGGAGCCTGAAGATTTTGCAATGTATTACTGTCAACAGCATAATGAATACCCGTAC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV16-104*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 288, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTCCAGATAACCCAGTCTCCATCTTATCTTGCTGCATCTCCTGGAGAAACCATTACTATTAATTGCAGGGCAAGTAAGAGCATTAGCAAATATTTAGCCTGGTATCAAGAGAAACCTGGGAAAACTAATAAGCTTCTTATCTACTCTGGATCCACTTTGCAATCTGGAATTCCATCAAGGTTCAGTGGCAGTGGATCTGGTACAGATTTCACTCTCACCATCAGTAGCCTGGAGCCTGAAGATTTTGCAATGTATTACTGTCAACAGCATAATGAATACCCGTAC", "aligned_sequence": "GATGTCCAGATAACCCAGTCTCCATCTTATCTTGCTGCATCTCCTGGAGAAACCATTACTATTAATTGCAGGGCAAGTAAGAGCATT..................AGCAAATATTTAGCCTGGTATCAAGAGAAACCTGGGAAAACTAATAAGCTTCTTATCTACTCTGGA.....................TCCACTTTGCAATCTGGAATTCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGTACAGATTTCACTCTCACCATCAGTAGCCTGGAGCCTGAAGATTTTGCAATGTATTACTGTCAACAGCATAATGAATACCCGTAC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01653", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ANIM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ANIM*00", "sequence": "GACATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGGGTACTGCTGTAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCCCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGCAAGATTATAGCACTCCTCC", "coding_sequence": "GACATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGGGTACTGCTGTAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCCCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGCAAGATTATAGCACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-25*01_S9703_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGGGTACTGCTGTAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCCCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGCAAGATTATAGCACTCCTCC", "aligned_sequence": "GACATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTG..................GGTACTGCTGTAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCA.....................TCCACCCGGCACACTGGAGTCCCT...GATCCCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGCAAGATTATAGCACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01584", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ANNE.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ANNE*00", "sequence": "GATATTGTGATGACTCAGGCTGCACCCTCTGTACCTGTCACTCCTGGAGAGTCAGTATCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTGCATAGTAATGGCAACACTTACTTGTATTGGTTCCTGCAGAGGCCAGGCCAGTCTCCTCAGCTCCTGATATATCGGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGAACTGCTTTCACACTGAGAATCAGTAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTATGCAACATCTAGAATATCCTTT", "coding_sequence": "GATATTGTGATGACTCAGGCTGCACCCTCTGTACCTGTCACTCCTGGAGAGTCAGTATCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTGCATAGTAATGGCAACACTTACTTGTATTGGTTCCTGCAGAGGCCAGGCCAGTCTCCTCAGCTCCTGATATATCGGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGAACTGCTTTCACACTGAGAATCAGTAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTATGCAACATCTAGAATATCCTTT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV2-137*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACTCAGGCTGCACCCTCTGTACCTGTCACTCCTGGAGAGTCAGTATCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTGCATAGTAATGGCAACACTTACTTGTATTGGTTCCTGCAGAGGCCAGGCCAGTCTCCTCAGCTCCTGATATATCGGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGAACTGCTTTCACACTGAGAATCAGTAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTATGCAACATCTAGAATATCCTTT", "aligned_sequence": "GATATTGTGATGACTCAGGCTGCACCCTCTGTACCTGTCACTCCTGGAGAGTCAGTATCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTGCATAGT...AATGGCAACACTTACTTGTATTGGTTCCTGCAGAGGCCAGGCCAGTCTCCTCAGCTCCTGATATATCGGATG.....................TCCAACCTTGCCTCAGGAGTCCCA...GACAGGTTCAGTGGCAGTGGG......TCAGGAACTGCTTTCACACTGAGAATCAGTAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTATGCAACATCTAGAATATCCTTT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01650", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-B3PF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-B3PF*00", "sequence": "GACATCCAGATGACACAATCTTCATCCTCCTTGTCTGTATCTCTAGGAGACAGAGTCACCATTACTTGCAAGGCAAGTGAGCACATTAATAGTTGGTTAGCCTGGTATCAGCAAAAACCAGGAAATGCTCCTAGGCTCTTAATATCTGGTGCAACCAGTTTGGAAACTGGGGTTCCTTCAAGATTCAGTGGCAGTGCATCTGGAAAGGATTACACTCTCAGCATTACTAGTCTTCAGACTGAAGATGTTGCTACTTATTACTGTCAACAGTATTGGGGTACTCCTCC", "coding_sequence": "GACATCCAGATGACACAATCTTCATCCTCCTTGTCTGTATCTCTAGGAGACAGAGTCACCATTACTTGCAAGGCAAGTGAGCACATTAATAGTTGGTTAGCCTGGTATCAGCAAAAACCAGGAAATGCTCCTAGGCTCTTAATATCTGGTGCAACCAGTTTGGAAACTGGGGTTCCTTCAAGATTCAGTGGCAGTGCATCTGGAAAGGATTACACTCTCAGCATTACTAGTCTTCAGACTGAAGATGTTGCTACTTATTACTGTCAACAGTATTGGGGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV13-85*01_S1266_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACACAATCTTCATCCTCCTTGTCTGTATCTCTAGGAGACAGAGTCACCATTACTTGCAAGGCAAGTGAGCACATTAATAGTTGGTTAGCCTGGTATCAGCAAAAACCAGGAAATGCTCCTAGGCTCTTAATATCTGGTGCAACCAGTTTGGAAACTGGGGTTCCTTCAAGATTCAGTGGCAGTGCATCTGGAAAGGATTACACTCTCAGCATTACTAGTCTTCAGACTGAAGATGTTGCTACTTATTACTGTCAACAGTATTGGGGTACTCCTCC", "aligned_sequence": "GACATCCAGATGACACAATCTTCATCCTCCTTGTCTGTATCTCTAGGAGACAGAGTCACCATTACTTGCAAGGCAAGTGAGCACATT..................AATAGTTGGTTAGCCTGGTATCAGCAAAAACCAGGAAATGCTCCTAGGCTCTTAATATCTGGTGCA.....................ACCAGTTTGGAAACTGGGGTTCCT...TCAAGATTCAGTGGCAGTGCA......TCTGGAAAGGATTACACTCTCAGCATTACTAGTCTTCAGACTGAAGATGTTGCTACTTATTACTGTCAACAGTATTGGGGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01621", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-BFUQ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-BFUQ*00", "sequence": "GACATCCAGATGAACCAGTCTCCATCCAGTCTGTCTGCATCCCTTGGAGACACAATTACCATCACTTGCCATGCCAGTCAGAACATTAATGTTTGGTTAAGCTGGTACCAGCAGAAACCAGGAAATATTCCTAAACTATTGATCTATAAGGCTTCCAACTTGCACACAGGCGTCCCATCAAGGTTTAGTGGCAGTGGATCTGGAACAGGTTTCACATTAACCATCAGCAGCCTGCAGCCTGAAGACATTGCCACTTACTACTGTCAACAGGGTCAAAGTTATCCTCT", "coding_sequence": "GACATCCAGATGAACCAGTCTCCATCCAGTCTGTCTGCATCCCTTGGAGACACAATTACCATCACTTGCCATGCCAGTCAGAACATTAATGTTTGGTTAAGCTGGTACCAGCAGAAACCAGGAAATATTCCTAAACTATTGATCTATAAGGCTTCCAACTTGCACACAGGCGTCCCATCAAGGTTTAGTGGCAGTGGATCTGGAACAGGTTTCACATTAACCATCAGCAGCCTGCAGCCTGAAGACATTGCCACTTACTACTGTCAACAGGGTCAAAGTTATCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV15-103*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGAACCAGTCTCCATCCAGTCTGTCTGCATCCCTTGGAGACACAATTACCATCACTTGCCATGCCAGTCAGAACATTAATGTTTGGTTAAGCTGGTACCAGCAGAAACCAGGAAATATTCCTAAACTATTGATCTATAAGGCTTCCAACTTGCACACAGGCGTCCCATCAAGGTTTAGTGGCAGTGGATCTGGAACAGGTTTCACATTAACCATCAGCAGCCTGCAGCCTGAAGACATTGCCACTTACTACTGTCAACAGGGTCAAAGTTATCCTCT", "aligned_sequence": "GACATCCAGATGAACCAGTCTCCATCCAGTCTGTCTGCATCCCTTGGAGACACAATTACCATCACTTGCCATGCCAGTCAGAACATT..................AATGTTTGGTTAAGCTGGTACCAGCAGAAACCAGGAAATATTCCTAAACTATTGATCTATAAGGCT.....................TCCAACTTGCACACAGGCGTCCCA...TCAAGGTTTAGTGGCAGTGGA......TCTGGAACAGGTTTCACATTAACCATCAGCAGCCTGCAGCCTGAAGACATTGCCACTTACTACTGTCAACAGGGTCAAAGTTATCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01618", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-BSKW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-BSKW*00", "sequence": "GATATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGGGAATATTCACAATTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCGGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGAACACAATATTCTCTCAAGATCAACAGCCTGCAGCCTGAGGATTTTGGGAGTTATTACTGTCATCATTATTATAGTACTCCTCC", "coding_sequence": "GATATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGGGAATATTCACAATTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCGGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGAACACAATATTCTCTCAAGATCAACAGCCTGCAGCCTGAGGATTTTGGGAGTTATTACTGTCATCATTATTATAGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-41*01_S6800_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGGGAATATTCACAATTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCGGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGAACACAATATTCTCTCAAGATCAACAGCCTGCAGCCTGAGGATTTTGGGAGTTATTACTGTCATCATTATTATAGTACTCCTCC", "aligned_sequence": "GATATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGGGAATATT..................CACAATTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCA.....................AAAACCTTAGCGGAAGGTGTGCCA...TCAAGGTTCAGTGGCAGTGGA......TCAGGAACACAATATTCTCTCAAGATCAACAGCCTGCAGCCTGAGGATTTTGGGAGTTATTACTGTCATCATTATTATAGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01613", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-BZCX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-BZCX*00", "sequence": "GAAATTGTGTTGACGCAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAAAGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGATACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "coding_sequence": "GAAATTGTGTTGACGCAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAAAGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGATACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-16*01_S7495_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACGCAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAAAGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGATACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "aligned_sequence": "GAAATTGTGTTGACGCAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAAAGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACA.....................TCTGATAGATACTCTGGAGTCCCT...GATCGTTTCATAGGCAGTGGA......TCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01642", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-CAIY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-CAIY*00", "sequence": "GAAATTGTGCTCACTCAGTCTCCAGCCATCACAGCTGCATCTCTGGGGCAAAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAACCATGGATTTATGAAATATCCAAACTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCATTTATTACTGCCAGCAGTGGAATTATCCACTTA", "coding_sequence": "GAAATTGTGCTCACTCAGTCTCCAGCCATCACAGCTGCATCTCTGGGGCAAAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAACCATGGATTTATGAAATATCCAAACTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCATTTATTACTGCCAGCAGTGGAATTATCCACTTA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-86*01_S4316_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 283, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTCACTCAGTCTCCAGCCATCACAGCTGCATCTCTGGGGCAAAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAACCATGGATTTATGAAATATCCAAACTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCATTTATTACTGCCAGCAGTGGAATTATCCACTTA", "aligned_sequence": "GAAATTGTGCTCACTCAGTCTCCAGCCATCACAGCTGCATCTCTGGGGCAAAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTGTA.....................AGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAACCATGGATTTATGAAATA.....................TCCAAACTGGCTTCTGGAGTCCCA...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCATTTATTACTGCCAGCAGTGGAATTATCCACTTA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01658", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-CANL.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-CANL*00", "sequence": "GAAATGGTTCTCACCCAGTCTCCAGTATCCATAACTGCATCTCGAGGGGAGAAGATCACCATCACCTGCCGTGCCAGCTCAAGTATAAGTTCCAATTACTTACACTGGTACCAGCAGAAGCCAGGATCCTCCCCTAAACTTTTGATTTATAGGACATCCATCCTGGCATCTGGAGTCCTAGACAACTTCAGTGGCAGTGGGTCTGAGAGCTCTTACACTCTGACAATCAGCTGCATGCAGGACGATGTTGCTGCCACTTACTACTGTCAGCAGGGGAGTAGTAGCCCACCA", "coding_sequence": "GAAATGGTTCTCACCCAGTCTCCAGTATCCATAACTGCATCTCGAGGGGAGAAGATCACCATCACCTGCCGTGCCAGCTCAAGTATAAGTTCCAATTACTTACACTGGTACCAGCAGAAGCCAGGATCCTCCCCTAAACTTTTGATTTATAGGACATCCATCCTGGCATCTGGAGTCCTAGACAACTTCAGTGGCAGTGGGTCTGAGAGCTCTTACACTCTGACAATCAGCTGCATGCAGGACGATGTTGCTGCCACTTACTACTGTCAGCAGGGGAGTAGTAGCCCACCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-92*01_S4902_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 291, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATGGTTCTCACCCAGTCTCCAGTATCCATAACTGCATCTCGAGGGGAGAAGATCACCATCACCTGCCGTGCCAGCTCAAGTATAAGTTCCAATTACTTACACTGGTACCAGCAGAAGCCAGGATCCTCCCCTAAACTTTTGATTTATAGGACATCCATCCTGGCATCTGGAGTCCTAGACAACTTCAGTGGCAGTGGGTCTGAGAGCTCTTACACTCTGACAATCAGCTGCATGCAGGACGATGTTGCTGCCACTTACTACTGTCAGCAGGGGAGTAGTAGCCCACCA", "aligned_sequence": "GAAATGGTTCTCACCCAGTCTCCAGTATCCATAACTGCATCTCGAGGGGAGAAGATCACCATCACCTGCCGTGCCAGCTCAAGTATAAGT...............TCCAATTACTTACACTGGTACCAGCAGAAGCCAGGATCCTCCCCTAAACTTTTGATTTATAGGACA.....................TCCATCCTGGCATCTGGAGTCCTA...GACAACTTCAGTGGCAGTGGG......TCTGAGAGCTCTTACACTCTGACAATCAGCTGCATGCAGGACGATGTTGCTGCCACTTACTACTGTCAGCAGGGGAGTAGTAGCCCACCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01612", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-CEL4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-CEL4*00", "sequence": "GAAAATGTGCTCACCCAGTCTCCAGCAATCATGTCTGCAACTCTAGGGGAGAAGGTCACCATGAGCTGCAGGGCCAGCTCAAATGTAAAGTACATGTACTGGTACCAGCAGAAGTCAGGTGCCTCCCCCAAACTATGGATTTATTACACATCCAACCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTTTACTAGTTCCCCATCCA", "coding_sequence": "GAAAATGTGCTCACCCAGTCTCCAGCAATCATGTCTGCAACTCTAGGGGAGAAGGTCACCATGAGCTGCAGGGCCAGCTCAAATGTAAAGTACATGTACTGGTACCAGCAGAAGTCAGGTGCCTCCCCCAAACTATGGATTTATTACACATCCAACCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTTTACTAGTTCCCCATCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-50*01_S2188_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAAATGTGCTCACCCAGTCTCCAGCAATCATGTCTGCAACTCTAGGGGAGAAGGTCACCATGAGCTGCAGGGCCAGCTCAAATGTAAAGTACATGTACTGGTACCAGCAGAAGTCAGGTGCCTCCCCCAAACTATGGATTTATTACACATCCAACCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTTTACTAGTTCCCCATCCA", "aligned_sequence": "GAAAATGTGCTCACCCAGTCTCCAGCAATCATGTCTGCAACTCTAGGGGAGAAGGTCACCATGAGCTGCAGGGCCAGCTCAAATGTA.....................AAGTACATGTACTGGTACCAGCAGAAGTCAGGTGCCTCCCCCAAACTATGGATTTATTACACA.....................TCCAACCTGGCTTCTGGAGTCCCA...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTATTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTTTACTAGTTCCCCATCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01635", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-CYRO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-CYRO*00", "sequence": "GAAATTGTGTTGACACAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAACGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGGTACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGATGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "coding_sequence": "GAAATTGTGTTGACACAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAACGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGGTACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGATGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-16*01_S1056_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACACAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAACGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACATCTGATAGGTACTCTGGAGTCCCTGATCGTTTCATAGGCAGTGGATCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGATGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "aligned_sequence": "GAAATTGTGTTGACACAGTCTATACCATCCCTGACTGTGTCAGCAGGAGAGAGGGTCACTATCAGCTGCAAATCCAATCAGAATCTTTTATGGAGTGGAAACCAACGGTACTGTTTGGTCTGGCACCAGTGGAAACCAGGGCAAACTCCTACACCGTTGATCACCTGGACA.....................TCTGATAGGTACTCTGGAGTCCCT...GATCGTTTCATAGGCAGTGGA......TCTGTGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGATGAAGATGTGGCAGTTTATTTCTGTCAGCAGCATTTACACATTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01638", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-DBG3.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-DBG3*00", "sequence": "GAAAATGTGCTGACCCAGTCTCCAGCAATCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCTGGTAACTTTCACTGGTACCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGGACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTTACAATCAGCAGCATGGAGGCCGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTGGTTACCCACCCA", "coding_sequence": "GAAAATGTGCTGACCCAGTCTCCAGCAATCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCTGGTAACTTTCACTGGTACCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGGACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTTACAATCAGCAGCATGGAGGCCGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTGGTTACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-81*01_S2422_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAAATGTGCTGACCCAGTCTCCAGCAATCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCTGGTAACTTTCACTGGTACCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGGACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTTACAATCAGCAGCATGGAGGCCGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTGGTTACCCACCCA", "aligned_sequence": "GAAAATGTGCTGACCCAGTCTCCAGCAATCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGT...............TCTGGTAACTTTCACTGGTACCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGGACA.....................TCCAACCTGGCTTCTGGAGTCCCC...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTTACAATCAGCAGCATGGAGGCCGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTGGTTACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01589", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-DBGO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-DBGO*00", "sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCGTCACCTGCAAGGCCAGTCAGTATGTGGGTACTTATGTAGCCTGGTATCAACAGAAACCAGGACAATCTCCTAAAGCACTGATTTACTCGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTGAGCAATACAGCAGCTCTCCTCT", "coding_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCGTCACCTGCAAGGCCAGTCAGTATGTGGGTACTTATGTAGCCTGGTATCAACAGAAACCAGGACAATCTCCTAAAGCACTGATTTACTCGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTGAGCAATACAGCAGCTCTCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-15*01_S9094_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCGTCACCTGCAAGGCCAGTCAGTATGTGGGTACTTATGTAGCCTGGTATCAACAGAAACCAGGACAATCTCCTAAAGCACTGATTTACTCGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTGAGCAATACAGCAGCTCTCCTCT", "aligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCGTCACCTGCAAGGCCAGTCAGTATGTG..................GGTACTTATGTAGCCTGGTATCAACAGAAACCAGGACAATCTCCTAAAGCACTGATTTACTCGGCA.....................TCCACCCGGCACACTGGAGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTGAGCAATACAGCAGCTCTCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01595", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-DRM6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-DRM6*00", "sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGAGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACTACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "coding_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGAGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACTACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV5-45*01_S0430_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGAGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACTACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "aligned_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGAGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATT..................AGCAACTACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCT.....................TCCCAGTCCATCTCTGGGATCCCC...TCCAGGTTCAGTGGCAGTGGA......TCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01663", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-DX3G.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-DX3G*00", "sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCTTGTATCAGCAGGAGACAGGGTTACCATAACCTGCAAGGCCAGTCAGAGTGTGAGTAATGATGTAGCTTGGTACCAACAGAAGCCAGGGCAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATATGGGACGGATTTCACTTTCACCATCAGCACTGTGCAGGCTGAAGACCTGGCAGTTTATTTCTGTCAGCAGGATTATAGCTCTCCTCC", "coding_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCTTGTATCAGCAGGAGACAGGGTTACCATAACCTGCAAGGCCAGTCAGAGTGTGAGTAATGATGTAGCTTGGTACCAACAGAAGCCAGGGCAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATATGGGACGGATTTCACTTTCACCATCAGCACTGTGCAGGCTGAAGACCTGGCAGTTTATTTCTGTCAGCAGGATTATAGCTCTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-32*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCTTGTATCAGCAGGAGACAGGGTTACCATAACCTGCAAGGCCAGTCAGAGTGTGAGTAATGATGTAGCTTGGTACCAACAGAAGCCAGGGCAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATATGGGACGGATTTCACTTTCACCATCAGCACTGTGCAGGCTGAAGACCTGGCAGTTTATTTCTGTCAGCAGGATTATAGCTCTCCTCC", "aligned_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCTTGTATCAGCAGGAGACAGGGTTACCATAACCTGCAAGGCCAGTCAGAGTGTG..................AGTAATGATGTAGCTTGGTACCAACAGAAGCCAGGGCAGTCTCCTAAACTGCTGATATACTATGCA.....................TCCAATCGCTACACTGGAGTCCCT...GATCGCTTCACTGGCAGTGGA......TATGGGACGGATTTCACTTTCACCATCAGCACTGTGCAGGCTGAAGACCTGGCAGTTTATTTCTGTCAGCAGGATTATAGCTCTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01611", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-EDU7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-EDU7*00", "sequence": "AAAATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAAGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGGTCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTGATCCTGTGGAGGCTGATGATGCTGCAACCTATTACTGTCAGCAAAATAATGAGGATCCTCC", "coding_sequence": "AAAATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAAGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGGTCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTGATCCTGTGGAGGCTGATGATGCTGCAACCTATTACTGTCAGCAAAATAATGAGGATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-10*01_S5437_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AAAATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAAGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGGTCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTGATCCTGTGGAGGCTGATGATGCTGCAACCTATTACTGTCAGCAAAATAATGAGGATCCTCC", "aligned_sequence": "AAAATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAAGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGT......TATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCA.....................TCCAACCTAGAATCTGGGGTCCCT...GCCAGGTTCAGTGGCAGTGGG......TCTAGGACAGACTTCACCCTCACCATTGATCCTGTGGAGGCTGATGATGCTGCAACCTATTACTGTCAGCAAAATAATGAGGATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01654", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-EGEN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-EGEN*00", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGCCGGGCAAGTCAGGACATTCATGGTTATTTAAACTTGTTTCAGCAGAAACCAGGTGAAACTATTAAACACCTGATCTATGAAACATCCAATTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCATTATCGGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTCTCCTCC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGCCGGGCAAGTCAGGACATTCATGGTTATTTAAACTTGTTTCAGCAGAAACCAGGTGAAACTATTAAACACCTGATCTATGAAACATCCAATTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCATTATCGGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTCTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV9-129*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGCCGGGCAAGTCAGGACATTCATGGTTATTTAAACTTGTTTCAGCAGAAACCAGGTGAAACTATTAAACACCTGATCTATGAAACATCCAATTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCATTATCGGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTCTCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGCCGGGCAAGTCAGGACATT..................CATGGTTATTTAAACTTGTTTCAGCAGAAACCAGGTGAAACTATTAAACACCTGATCTATGAAACA.....................TCCAATTTAGATTCTGGTGTCCCA...AAAAGGTTCAGTGGCAGTAGG......TCTGGGTCAGATTATTCTCTCATTATCGGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTCTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Imported to OGRDB with the following notes:\r\nConserved Trp not found", "curational_tags": null }, { "allele_description_id": "OGRDB:A01648", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-EGPO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-EGPO*00", "sequence": "GATGTTGTGATGACCCAGACTCCACTGTCTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAGACATATTTGAATTGGTTACAACAGAGGCCTGGCCAGGCTCCAAAGCACCTAATGTATCAGGTGTCCAAACTGGACCCTGGCATCCCTGACAGGTTCAGTGGCAGTGGATCAGAAACAGATTTTACACTTAAAATCAGCAGAGTGGAGGCTGAAGATTTGGGAGTTTATTACTGCTTGCAAGGTACATATTATCCTCA", "coding_sequence": "GATGTTGTGATGACCCAGACTCCACTGTCTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAGACATATTTGAATTGGTTACAACAGAGGCCTGGCCAGGCTCCAAAGCACCTAATGTATCAGGTGTCCAAACTGGACCCTGGCATCCCTGACAGGTTCAGTGGCAGTGGATCAGAAACAGATTTTACACTTAAAATCAGCAGAGTGGAGGCTGAAGATTTGGGAGTTTATTACTGCTTGCAAGGTACATATTATCCTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-132*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACCCAGACTCCACTGTCTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAGACATATTTGAATTGGTTACAACAGAGGCCTGGCCAGGCTCCAAAGCACCTAATGTATCAGGTGTCCAAACTGGACCCTGGCATCCCTGACAGGTTCAGTGGCAGTGGATCAGAAACAGATTTTACACTTAAAATCAGCAGAGTGGAGGCTGAAGATTTGGGAGTTTATTACTGCTTGCAAGGTACATATTATCCTCA", "aligned_sequence": "GATGTTGTGATGACCCAGACTCCACTGTCTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGT...AATGGAAAGACATATTTGAATTGGTTACAACAGAGGCCTGGCCAGGCTCCAAAGCACCTAATGTATCAGGTG.....................TCCAAACTGGACCCTGGCATCCCT...GACAGGTTCAGTGGCAGTGGA......TCAGAAACAGATTTTACACTTAAAATCAGCAGAGTGGAGGCTGAAGATTTGGGAGTTTATTACTGCTTGCAAGGTACATATTATCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01630", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-EJQ5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-EJQ5*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-74*01_S3912_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGT...............TCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01602", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ERQ2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ERQ2*00", "sequence": "GACATCAAGATGACCCAGTCTCCATCCTCCATGTATGCATCGCTGGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAAAAGCTATTTAAGCTGGTACCAGCAGAAACCATGGAAATCTCCTAAGACCCTGATCTATTATGCAACAAGCTTGGCAGATGGGGTCCCATCAAGATTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTAACCATCAGCAGCCTGGAGTCTGACGATACAGCAACTTATTACTGTCTACAGCATGGTGAGAGCCCTCC", "coding_sequence": "GACATCAAGATGACCCAGTCTCCATCCTCCATGTATGCATCGCTGGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAAAAGCTATTTAAGCTGGTACCAGCAGAAACCATGGAAATCTCCTAAGACCCTGATCTATTATGCAACAAGCTTGGCAGATGGGGTCCCATCAAGATTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTAACCATCAGCAGCCTGGAGTCTGACGATACAGCAACTTATTACTGTCTACAGCATGGTGAGAGCCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV14-126*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCAAGATGACCCAGTCTCCATCCTCCATGTATGCATCGCTGGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATTAAAAGCTATTTAAGCTGGTACCAGCAGAAACCATGGAAATCTCCTAAGACCCTGATCTATTATGCAACAAGCTTGGCAGATGGGGTCCCATCAAGATTCAGTGGCAGTGGATCTGGGCAAGATTATTCTCTAACCATCAGCAGCCTGGAGTCTGACGATACAGCAACTTATTACTGTCTACAGCATGGTGAGAGCCCTCC", "aligned_sequence": "GACATCAAGATGACCCAGTCTCCATCCTCCATGTATGCATCGCTGGGAGAGAGAGTCACTATCACTTGCAAGGCGAGTCAGGACATT..................AAAAGCTATTTAAGCTGGTACCAGCAGAAACCATGGAAATCTCCTAAGACCCTGATCTATTATGCA.....................ACAAGCTTGGCAGATGGGGTCCCA...TCAAGATTCAGTGGCAGTGGA......TCTGGGCAAGATTATTCTCTAACCATCAGCAGCCTGGAGTCTGACGATACAGCAACTTATTACTGTCTACAGCATGGTGAGAGCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01582", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ESNY.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ESNY*00", "sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGACTGTGACAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTGGAAATCAAAAGAACTACTTGACCTGGTACCAGCAGAAACCAGGGCAGCCTCCTAAACTGTTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCCTCC", "coding_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGACTGTGACAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTGGAAATCAAAAGAACTACTTGACCTGGTACCAGCAGAAACCAGGGCAGCCTCCTAAACTGTTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-19*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGACTGTGACAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTGGAAATCAAAAGAACTACTTGACCTGGTACCAGCAGAAACCAGGGCAGCCTCCTAAACTGTTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCCTCC", "aligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGACTGTGACAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTGGAAATCAAAAGAACTACTTGACCTGGTACCAGCAGAAACCAGGGCAGCCTCCTAAACTGTTGATCTACTGGGCA.....................TCCACTAGGGAATCTGGGGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01604", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-FDVH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-FDVH*00", "sequence": "GACATTGTGATGACTCAGTCTCCAACTTTCCTTGCTGTGACAGCAAGTAAGAAGGTCACCATTAGTTGCACGGCCAGTGAGAGCCTTTATTCAAGCAAACACAAGGTGAACTACTTAGCTTGGTACCAGAAGAAACCAGAGCAATCTCCTAAACTGCTGATTTATGGGGCATCCAACCGATTCACTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTCACACATTATTACTGTGCACAGTTTTACAGCTATCCTCT", "coding_sequence": "GACATTGTGATGACTCAGTCTCCAACTTTCCTTGCTGTGACAGCAAGTAAGAAGGTCACCATTAGTTGCACGGCCAGTGAGAGCCTTTATTCAAGCAAACACAAGGTGAACTACTTAGCTTGGTACCAGAAGAAACCAGAGCAATCTCCTAAACTGCTGATTTATGGGGCATCCAACCGATTCACTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTCACACATTATTACTGTGCACAGTTTTACAGCTATCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV7-33*01_S2856_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACTCAGTCTCCAACTTTCCTTGCTGTGACAGCAAGTAAGAAGGTCACCATTAGTTGCACGGCCAGTGAGAGCCTTTATTCAAGCAAACACAAGGTGAACTACTTAGCTTGGTACCAGAAGAAACCAGAGCAATCTCCTAAACTGCTGATTTATGGGGCATCCAACCGATTCACTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTCACACATTATTACTGTGCACAGTTTTACAGCTATCCTCT", "aligned_sequence": "GACATTGTGATGACTCAGTCTCCAACTTTCCTTGCTGTGACAGCAAGTAAGAAGGTCACCATTAGTTGCACGGCCAGTGAGAGCCTTTATTCAAGCAAACACAAGGTGAACTACTTAGCTTGGTACCAGAAGAAACCAGAGCAATCTCCTAAACTGCTGATTTATGGGGCA.....................TCCAACCGATTCACTGGGGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTCACACATTATTACTGTGCACAGTTTTACAGCTATCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01606", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-FEP6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-FEP6*00", "sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATCACCTGCAGTGTCAGCTCAAGTATAAGTTCCAGCAACTTACACTGGTACCAGCAGAAGTCAGGAACCTCCCCCAAACCCTGGATTTATGGCACATCCAACCTTGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGTCAACAGTGGAGTAGTTACCCACTCA", "coding_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATCACCTGCAGTGTCAGCTCAAGTATAAGTTCCAGCAACTTACACTGGTACCAGCAGAAGTCAGGAACCTCCCCCAAACCCTGGATTTATGGCACATCCAACCTTGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGTCAACAGTGGAGTAGTTACCCACTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-53*01_S3575_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATCACCTGCAGTGTCAGCTCAAGTATAAGTTCCAGCAACTTACACTGGTACCAGCAGAAGTCAGGAACCTCCCCCAAACCCTGGATTTATGGCACATCCAACCTTGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGTCAACAGTGGAGTAGTTACCCACTCA", "aligned_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATCACCTGCAGTGTCAGCTCAAGTATAAGT...............TCCAGCAACTTACACTGGTACCAGCAGAAGTCAGGAACCTCCCCCAAACCCTGGATTTATGGCACA.....................TCCAACCTTGCTTCTGGAGTCCCT...GTTCGCTTCAGTGGCAGTGGA......TCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGTCAACAGTGGAGTAGTTACCCACTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01633", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-FMIF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-FMIF*00", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGAAATTAGTGGTTACTTAAGCTGGCTTCAGCAGAAACCAGATGGAACTATTAAACGCCTGATCTACGCCGCATCCACTTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTATCCT", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGAAATTAGTGGTTACTTAAGCTGGCTTCAGCAGAAACCAGATGGAACTATTAAACGCCTGATCTACGCCGCATCCACTTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTATCCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV9-124*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 285, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGAAATTAGTGGTTACTTAAGCTGGCTTCAGCAGAAACCAGATGGAACTATTAAACGCCTGATCTACGCCGCATCCACTTTAGATTCTGGTGTCCCAAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTATCCT", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGAAATT..................AGTGGTTACTTAAGCTGGCTTCAGCAGAAACCAGATGGAACTATTAAACGCCTGATCTACGCCGCA.....................TCCACTTTAGATTCTGGTGTCCCA...AAAAGGTTCAGTGGCAGTAGG......TCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAATATGCTAGTTATCCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01631", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-FPZM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-FPZM*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCTGGGGAACGGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGCTACTTGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACTATGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTACAGTGGTTACCCATCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCTGGGGAACGGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGCTACTTGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACTATGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTACAGTGGTTACCCATCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-78*01_S3978_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCTGGGGAACGGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGCTACTTGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACTATGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTACAGTGGTTACCCATCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCTGGGGAACGGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGT...............TCCAGCTACTTGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAAACTATGGATTTATAGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTACAGTGGTTACCCATCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01614", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-FUMI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-FUMI*00", "sequence": "GACATTGTGCTGACACAGTCTCCTGCTTCCTTAGCTGTATCTCTGGGGCAGAGGGCCACCATCTCCTGCAGGGCCAGCAAAAGTGTCAGTACATCTAGCTATAGTTACATGCACTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCAAGTATGCATCCTACCTAGAATCTGGGGTTCCTGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACATATTACTGTCAGCACAGTAGGGAGTTTCCTCC", "coding_sequence": "GACATTGTGCTGACACAGTCTCCTGCTTCCTTAGCTGTATCTCTGGGGCAGAGGGCCACCATCTCCTGCAGGGCCAGCAAAAGTGTCAGTACATCTAGCTATAGTTACATGCACTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCAAGTATGCATCCTACCTAGAATCTGGGGTTCCTGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACATATTACTGTCAGCACAGTAGGGAGTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-7*01_S6705_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTGACACAGTCTCCTGCTTCCTTAGCTGTATCTCTGGGGCAGAGGGCCACCATCTCCTGCAGGGCCAGCAAAAGTGTCAGTACATCTAGCTATAGTTACATGCACTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCAAGTATGCATCCTACCTAGAATCTGGGGTTCCTGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACATATTACTGTCAGCACAGTAGGGAGTTTCCTCC", "aligned_sequence": "GACATTGTGCTGACACAGTCTCCTGCTTCCTTAGCTGTATCTCTGGGGCAGAGGGCCACCATCTCCTGCAGGGCCAGCAAAAGTGTCAGTACA......TCTAGCTATAGTTACATGCACTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCAAGTATGCA.....................TCCTACCTAGAATCTGGGGTTCCT...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACATATTACTGTCAGCACAGTAGGGAGTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01616", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-GFUI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-GFUI*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACTCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-57-1*01_S8603_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACTCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCCTCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGT...............TCCAGGTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTATGGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTATCATAGTGACCCACTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01629", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-GIAJ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-GIAJ*00", "sequence": "GACATCCTGATGACCCAATCTCCATCCTCCATGTCTGTATCTCTGGGAGACACAGTCAGCATCACTTGCCATGCAAGTCAGGGCATTAGCAGTAATATAGGGTGGTTGCAGCAGAAACCAGGGAAATCATTTAAGGGCCTGATCTATCATGCAACCAACTTGGAAGATGGAGTTCCATCAAGGTTCAGTGGCAGTGGATCTGGAGCAGATTATTCTCTCACCATCAGCAGCCTGGAATCTGAAGATTTTGCAGACTATTACTGTGTACAGTATGCTCAGTTTCCTCC", "coding_sequence": "GACATCCTGATGACCCAATCTCCATCCTCCATGTCTGTATCTCTGGGAGACACAGTCAGCATCACTTGCCATGCAAGTCAGGGCATTAGCAGTAATATAGGGTGGTTGCAGCAGAAACCAGGGAAATCATTTAAGGGCCTGATCTATCATGCAACCAACTTGGAAGATGGAGTTCCATCAAGGTTCAGTGGCAGTGGATCTGGAGCAGATTATTCTCTCACCATCAGCAGCCTGGAATCTGAAGATTTTGCAGACTATTACTGTGTACAGTATGCTCAGTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV14-100*01_S4794_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCTGATGACCCAATCTCCATCCTCCATGTCTGTATCTCTGGGAGACACAGTCAGCATCACTTGCCATGCAAGTCAGGGCATTAGCAGTAATATAGGGTGGTTGCAGCAGAAACCAGGGAAATCATTTAAGGGCCTGATCTATCATGCAACCAACTTGGAAGATGGAGTTCCATCAAGGTTCAGTGGCAGTGGATCTGGAGCAGATTATTCTCTCACCATCAGCAGCCTGGAATCTGAAGATTTTGCAGACTATTACTGTGTACAGTATGCTCAGTTTCCTCC", "aligned_sequence": "GACATCCTGATGACCCAATCTCCATCCTCCATGTCTGTATCTCTGGGAGACACAGTCAGCATCACTTGCCATGCAAGTCAGGGCATT..................AGCAGTAATATAGGGTGGTTGCAGCAGAAACCAGGGAAATCATTTAAGGGCCTGATCTATCATGCA.....................ACCAACTTGGAAGATGGAGTTCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGAGCAGATTATTCTCTCACCATCAGCAGCCTGGAATCTGAAGATTTTGCAGACTATTACTGTGTACAGTATGCTCAGTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01605", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-I3AX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-I3AX*00", "sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGGCTATGTCAGTAGGACAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTAAGTAGTAGCAATCAAAAGAACTATTTGGCCTGGTACCAGCAGAAACCAGGACAGTCTCCTAAACTTCTGGTATACTTTGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "coding_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGGCTATGTCAGTAGGACAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTAAGTAGTAGCAATCAAAAGAACTATTTGGCCTGGTACCAGCAGAAACCAGGACAGTCTCCTAAACTTCTGGTATACTTTGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-24*01_S8843_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGGCTATGTCAGTAGGACAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTAAGTAGTAGCAATCAAAAGAACTATTTGGCCTGGTACCAGCAGAAACCAGGACAGTCTCCTAAACTTCTGGTATACTTTGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "aligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGGCTATGTCAGTAGGACAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTAAGTAGTAGCAATCAAAAGAACTATTTGGCCTGGTACCAGCAGAAACCAGGACAGTCTCCTAAACTTCTGGTATACTTTGCA.....................TCCACTAGGGAATCTGGGGTCCCT...GATCGCTTCATAGGCAGTGGA......TCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01580", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-IFYI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-IFYI*00", "sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCAGCTGCAAGGCCAGTCAGAATGTGGGTAATATTATAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAAGCACTGATTTACTTGGCATCCTACCGGTACAGTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTCAGCAATATAGCAGCTCTCCTCT", "coding_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCAGCTGCAAGGCCAGTCAGAATGTGGGTAATATTATAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAAGCACTGATTTACTTGGCATCCTACCGGTACAGTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTCAGCAATATAGCAGCTCTCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-15*01_S9105_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCAGCTGCAAGGCCAGTCAGAATGTGGGTAATATTATAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAAGCACTGATTTACTTGGCATCCTACCGGTACAGTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTCAGCAATATAGCAGCTCTCCTCT", "aligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCAGCTGCAAGGCCAGTCAGAATGTG..................GGTAATATTATAGCCTGGTATCAACAGAAACCAGGGCAATCTCCTAAAGCACTGATTTACTTGGCA.....................TCCTACCGGTACAGTGGAGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATTAGCAATGTGCAGTCTGAAGACTTGGCAGAGTATTTCTGTCAGCAATATAGCAGCTCTCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01652", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-IL5X.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-IL5X*00", "sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTCAGTATTCGTGGTACTAGTTTAATGCACTGGTACCAACAGAAACCAGGATATCCACCCAAACTCCTCATCTATGCTGCATCCAACCTAGAATCTGGGGTTCCTGCCAGGTTTAGTGGCAGAAGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAAGATGATGCTGCAACCTATTACTGTCAGCAAAGTAGGGAATATCCTCC", "coding_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTCAGTATTCGTGGTACTAGTTTAATGCACTGGTACCAACAGAAACCAGGATATCCACCCAAACTCCTCATCTATGCTGCATCCAACCTAGAATCTGGGGTTCCTGCCAGGTTTAGTGGCAGAAGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAAGATGATGCTGCAACCTATTACTGTCAGCAAAGTAGGGAATATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-9*01_S5964_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTCAGTATTCGTGGTACTAGTTTAATGCACTGGTACCAACAGAAACCAGGATATCCACCCAAACTCCTCATCTATGCTGCATCCAACCTAGAATCTGGGGTTCCTGCCAGGTTTAGTGGCAGAAGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAAGATGATGCTGCAACCTATTACTGTCAGCAAAGTAGGGAATATCCTCC", "aligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTCAGTATT......CGTGGTACTAGTTTAATGCACTGGTACCAACAGAAACCAGGATATCCACCCAAACTCCTCATCTATGCTGCA.....................TCCAACCTAGAATCTGGGGTTCCT...GCCAGGTTTAGTGGCAGAAGG......TCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAAGATGATGCTGCAACCTATTACTGTCAGCAAAGTAGGGAATATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01640", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-J2R2.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-J2R2*00", "sequence": "GACATTGTGATGACCCAGTCTCCATCCTCCCTGGCTGTGACAGCAGGAGAGAAGGTCACTATGAGATGCAAGTCCAGTCAGAGTCTTTTGTGGAGTGTAAACCAAAAGAACTACTTATCCTGGTACCAGCAGAAACAAGGGCAGCCTCCTAAACTGCTTATCTATGGGGCATCCATTAGAGAATCTTGGGTCCCTGATCGATTCACAGGAAGTGGATCTGGGACAGACTTCACTCTCACCATTAGCAATGTGCATGCTGAAGACCTAGCAGTTTATTACTGTCAGCACAATCATGGCAGCTTTCTCCCCC", "coding_sequence": "GACATTGTGATGACCCAGTCTCCATCCTCCCTGGCTGTGACAGCAGGAGAGAAGGTCACTATGAGATGCAAGTCCAGTCAGAGTCTTTTGTGGAGTGTAAACCAAAAGAACTACTTATCCTGGTACCAGCAGAAACAAGGGCAGCCTCCTAAACTGCTTATCTATGGGGCATCCATTAGAGAATCTTGGGTCCCTGATCGATTCACAGGAAGTGGATCTGGGACAGACTTCACTCTCACCATTAGCAATGTGCATGCTGAAGACCTAGCAGTTTATTACTGTCAGCACAATCATGGCAGCTTTCTCCCCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-18*01_S2898_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 310, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGTCTCCATCCTCCCTGGCTGTGACAGCAGGAGAGAAGGTCACTATGAGATGCAAGTCCAGTCAGAGTCTTTTGTGGAGTGTAAACCAAAAGAACTACTTATCCTGGTACCAGCAGAAACAAGGGCAGCCTCCTAAACTGCTTATCTATGGGGCATCCATTAGAGAATCTTGGGTCCCTGATCGATTCACAGGAAGTGGATCTGGGACAGACTTCACTCTCACCATTAGCAATGTGCATGCTGAAGACCTAGCAGTTTATTACTGTCAGCACAATCATGGCAGCTTTCTCCCCC", "aligned_sequence": "GACATTGTGATGACCCAGTCTCCATCCTCCCTGGCTGTGACAGCAGGAGAGAAGGTCACTATGAGATGCAAGTCCAGTCAGAGTCTTTTGTGGAGTGTAAACCAAAAGAACTACTTATCCTGGTACCAGCAGAAACAAGGGCAGCCTCCTAAACTGCTTATCTATGGGGCA.....................TCCATTAGAGAATCTTGGGTCCCT...GATCGATTCACAGGAAGTGGA......TCTGGGACAGACTTCACTCTCACCATTAGCAATGTGCATGCTGAAGACCTAGCAGTTTATTACTGTCAGCACAATCATGGCAGCTTTCTCCCCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01624", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-J3XP.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-J3XP*00", "sequence": "GATATTGTGATGACGCAGGCTGCATTCTCCAATCCAGTCACTCTTGGAACATCAGCTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTACATAGTAATGGCATCACTTATTTGTATTGGTATCTGCAGAAGCCAGGCCAGTCTCCTCAGCTCCTGATTTATCAGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTAGCAGTGGGTCAGGAACTGATTTCACACTGAGAATCAGCAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTGCTCAAAATCTAGAACTTCCTCC", "coding_sequence": "GATATTGTGATGACGCAGGCTGCATTCTCCAATCCAGTCACTCTTGGAACATCAGCTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTACATAGTAATGGCATCACTTATTTGTATTGGTATCTGCAGAAGCCAGGCCAGTCTCCTCAGCTCCTGATTTATCAGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTAGCAGTGGGTCAGGAACTGATTTCACACTGAGAATCAGCAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTGCTCAAAATCTAGAACTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV2-109*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACGCAGGCTGCATTCTCCAATCCAGTCACTCTTGGAACATCAGCTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTACATAGTAATGGCATCACTTATTTGTATTGGTATCTGCAGAAGCCAGGCCAGTCTCCTCAGCTCCTGATTTATCAGATGTCCAACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTAGCAGTGGGTCAGGAACTGATTTCACACTGAGAATCAGCAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTGCTCAAAATCTAGAACTTCCTCC", "aligned_sequence": "GATATTGTGATGACGCAGGCTGCATTCTCCAATCCAGTCACTCTTGGAACATCAGCTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTACATAGT...AATGGCATCACTTATTTGTATTGGTATCTGCAGAAGCCAGGCCAGTCTCCTCAGCTCCTGATTTATCAGATG.....................TCCAACCTTGCCTCAGGAGTCCCA...GACAGGTTCAGTAGCAGTGGG......TCAGGAACTGATTTCACACTGAGAATCAGCAGAGTGGAGGCTGAGGATGTGGGTGTTTATTACTGTGCTCAAAATCTAGAACTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01617", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-J5UD.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-J5UD*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCTGGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTAGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCATCAGCGGAGTAGTTACCCATTCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCTGGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTAGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCATCAGCGGAGTAGTTACCCATTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-62*01_S2199_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCTGGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCCGCTCGCTTCAGTGGCAGTAGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCATCAGCGGAGTAGTTACCCATTCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTA.....................AGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCTGGATTTATGACACA.....................TCCAACCTGGCTTCTGGAGTCCCC...GCTCGCTTCAGTGGCAGTAGG......TCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCCATCAGCGGAGTAGTTACCCATTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01609", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-JDJH.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-JDJH*00", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGACATTGGTAGTAGCTTAAACTGGCTTCAGCAGGAACCAGATGGAACTATTAAACGCCTGATCTACGCCACATCCAGTTTAGATTCTGGTGTCCCCAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGTAGACTATTACTGTCTACAATATGCTAGTTCTCCT", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGACATTGGTAGTAGCTTAAACTGGCTTCAGCAGGAACCAGATGGAACTATTAAACGCCTGATCTACGCCACATCCAGTTTAGATTCTGGTGTCCCCAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGTAGACTATTACTGTCTACAATATGCTAGTTCTCCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV9-120*01_S2628_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 285, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGACATTGGTAGTAGCTTAAACTGGCTTCAGCAGGAACCAGATGGAACTATTAAACGCCTGATCTACGCCACATCCAGTTTAGATTCTGGTGTCCCCAAAAGGTTCAGTGGCAGTAGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGTAGACTATTACTGTCTACAATATGCTAGTTCTCCT", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCTTATCTGCCTCTCTGGGAGAAAGAGTCAGTCTCACTTGTCGGGCAAGTCAGGACATT..................GGTAGTAGCTTAAACTGGCTTCAGCAGGAACCAGATGGAACTATTAAACGCCTGATCTACGCCACA.....................TCCAGTTTAGATTCTGGTGTCCCC...AAAAGGTTCAGTGGCAGTAGG......TCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTTGAGTCTGAAGATTTTGTAGACTATTACTGTCTACAATATGCTAGTTCTCCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01597", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-JST4.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-JST4*00", "sequence": "CAGATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGGGCCAGCTCAAGTGTAAGTTCCAGTTACTTGCACTGGTACCAGCAGAAGCCAGGATCTTCCCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCAGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGTGTGGAGGCTGAGGATGCTGCCACTTATTACTGCCAGCAGTATGATAGTTCCCCACCCA", "coding_sequence": "CAGATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGGGCCAGCTCAAGTGTAAGTTCCAGTTACTTGCACTGGTACCAGCAGAAGCCAGGATCTTCCCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCAGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGTGTGGAGGCTGAGGATGCTGCCACTTATTACTGCCAGCAGTATGATAGTTCCCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-74*01_S3301_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAGATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGGGCCAGCTCAAGTGTAAGTTCCAGTTACTTGCACTGGTACCAGCAGAAGCCAGGATCTTCCCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCAGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGTGTGGAGGCTGAGGATGCTGCCACTTATTACTGCCAGCAGTATGATAGTTCCCCACCCA", "aligned_sequence": "CAGATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGGGCCAGCTCAAGTGTAAGT...............TCCAGTTACTTGCACTGGTACCAGCAGAAGCCAGGATCTTCCCCCAAACTCTGGATTTATAGCACA.....................TCCAACCTGGCTTCAGGAGTCCCA...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGTGTGGAGGCTGAGGATGCTGCCACTTATTACTGCCAGCAGTATGATAGTTCCCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01661", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-K7I5.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-K7I5*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCCTGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTTACCCACCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCCTGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTTACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-55*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCCTGATTTATGACACATCCAACCTGGCTTCTGGAGTCCCTGTTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTTACCCACCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTA.....................AGTTACATGTACTGGTACCAGCAGAAGCCAGGATCCTCCCCCAGACTCCTGATTTATGACACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GTTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAGTGGAGTAGTTACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01594", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-KM2V.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-KM2V*00", "sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGAGAGGGTCAGCATCACCTGCAAGGCCAGTCAGAATGTAGGTACTAATGTAGCCTGGTATCAGCAGAAAGCAGGGCAGTCTCTTGAACTGCTGATCTATGGGGCATCCAACCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCACCAATGTGCAGTCTGAAGACATGACAAATTATTTCTGTGAGCAATATAGCAGCTATCCTCT", "coding_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGAGAGGGTCAGCATCACCTGCAAGGCCAGTCAGAATGTAGGTACTAATGTAGCCTGGTATCAGCAGAAAGCAGGGCAGTCTCTTGAACTGCTGATCTATGGGGCATCCAACCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCACCAATGTGCAGTCTGAAGACATGACAAATTATTTCTGTGAGCAATATAGCAGCTATCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-23*01_S4960_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGAGAGGGTCAGCATCACCTGCAAGGCCAGTCAGAATGTAGGTACTAATGTAGCCTGGTATCAGCAGAAAGCAGGGCAGTCTCTTGAACTGCTGATCTATGGGGCATCCAACCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCACCAATGTGCAGTCTGAAGACATGACAAATTATTTCTGTGAGCAATATAGCAGCTATCCTCT", "aligned_sequence": "GACATTGTGATGACCCAGTCTCAAAAATTCATGTCCACATCAGTAGGAGAGAGGGTCAGCATCACCTGCAAGGCCAGTCAGAATGTA..................GGTACTAATGTAGCCTGGTATCAGCAGAAAGCAGGGCAGTCTCTTGAACTGCTGATCTATGGGGCA.....................TCCAACCGGCACACTGGAGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCACCAATGTGCAGTCTGAAGACATGACAAATTATTTCTGTGAGCAATATAGCAGCTATCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01664", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-LIEE.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-LIEE*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAAAGGAGTAGTTACCCACCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAAAGGAGTAGTTACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-57*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGATCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAAAGGAGTAGTTACCCACCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATAACCTGCAGTGCCAGCTCAAGTGTA.....................AGTTACATGCACTGGTTCCAGCAGAAGCCAGGCACTTCTCCCAAACTCTGGATTTATAGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGA......TCTGGGACCTCTTACTCTCTCACAATCAGCCGAATGGAGGCTGAAGATGCTGCCACTTATTACTGCCAGCAAAGGAGTAGTTACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01600", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-LJPZ.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-LJPZ*00", "sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTTGATTATGATGGCGATAGTTATATGAACTGGTACCAACAGAAACCAGGACAGCCACCGAAACTCCTCATCTATGCTGCATCCAATCTAGAATCTGGGATCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCTGCAAAGTAATGAGGCTCCTCC", "coding_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTTGATTATGATGGCGATAGTTATATGAACTGGTACCAACAGAAACCAGGACAGCCACCGAAACTCCTCATCTATGCTGCATCCAATCTAGAATCTGGGATCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCTGCAAAGTAATGAGGCTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-4*01_S8857_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTTGATTATGATGGCGATAGTTATATGAACTGGTACCAACAGAAACCAGGACAGCCACCGAAACTCCTCATCTATGCTGCATCCAATCTAGAATCTGGGATCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCTGCAAAGTAATGAGGCTCCTCC", "aligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATCTCCTGCAGAGCCAGCGAAAGTGTTGATTAT......GATGGCGATAGTTATATGAACTGGTACCAACAGAAACCAGGACAGCCACCGAAACTCCTCATCTATGCTGCA.....................TCCAATCTAGAATCTGGGATCCCT...GCCAGGTTTAGTGGCAGTGGG......TCTGGGACAGACTTCACCCTCAACATTCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCTGCAAAGTAATGAGGCTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01646", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-M24V.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-M24V*00", "sequence": "GACATCCAGATGATTCAGTCTCCATCGTCCATGTTTGCCTCTCTGGGAGACAGAGTCAGTCTCTCTTGTCGGGCTAGTCAGGGCATTAGAGGTAATTTAGACTGGTATCAGCAGAAACCAGGTGGAACTATTAAACTCCTGATCTACTCCACATCCAATTTAAATTCTGGTGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTAGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGCGTAATGCGTATCCT", "coding_sequence": "GACATCCAGATGATTCAGTCTCCATCGTCCATGTTTGCCTCTCTGGGAGACAGAGTCAGTCTCTCTTGTCGGGCTAGTCAGGGCATTAGAGGTAATTTAGACTGGTATCAGCAGAAACCAGGTGGAACTATTAAACTCCTGATCTACTCCACATCCAATTTAAATTCTGGTGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTAGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGCGTAATGCGTATCCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV9-123*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 285, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGATTCAGTCTCCATCGTCCATGTTTGCCTCTCTGGGAGACAGAGTCAGTCTCTCTTGTCGGGCTAGTCAGGGCATTAGAGGTAATTTAGACTGGTATCAGCAGAAACCAGGTGGAACTATTAAACTCCTGATCTACTCCACATCCAATTTAAATTCTGGTGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTAGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGCGTAATGCGTATCCT", "aligned_sequence": "GACATCCAGATGATTCAGTCTCCATCGTCCATGTTTGCCTCTCTGGGAGACAGAGTCAGTCTCTCTTGTCGGGCTAGTCAGGGCATT..................AGAGGTAATTTAGACTGGTATCAGCAGAAACCAGGTGGAACTATTAAACTCCTGATCTACTCCACA.....................TCCAATTTAAATTCTGGTGTCCCA...TCAAGGTTCAGTGGCAGTGGG......TCTGGGTCAGATTATTCTCTCACCATCAGCAGCCTAGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGCGTAATGCGTATCCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01641", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-MKM6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-MKM6*00", "sequence": "GATGCTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTTGAAAACAGTAATGGAAACACCTATTTGAACTGGTACCTCCAGAAACCAGGCCAGTCTCCACAGCTCCTGATCTACAGGGTTTCCAACCGATTTTCTGGGGTCCTAGACAGGTTCAGTGGTAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTTCTGCCTCCAAGTTACACATGTCCCTCC", "coding_sequence": "GATGCTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTTGAAAACAGTAATGGAAACACCTATTTGAACTGGTACCTCCAGAAACCAGGCCAGTCTCCACAGCTCCTGATCTACAGGGTTTCCAACCGATTTTCTGGGGTCCTAGACAGGTTCAGTGGTAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTTCTGCCTCCAAGTTACACATGTCCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-122*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGCTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTTGAAAACAGTAATGGAAACACCTATTTGAACTGGTACCTCCAGAAACCAGGCCAGTCTCCACAGCTCCTGATCTACAGGGTTTCCAACCGATTTTCTGGGGTCCTAGACAGGTTCAGTGGTAGTGGATCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTTCTGCCTCCAAGTTACACATGTCCCTCC", "aligned_sequence": "GATGCTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTTGAAAACAGT...AATGGAAACACCTATTTGAACTGGTACCTCCAGAAACCAGGCCAGTCTCCACAGCTCCTGATCTACAGGGTT.....................TCCAACCGATTTTCTGGGGTCCTA...GACAGGTTCAGTGGTAGTGGA......TCAGGGACAGATTTCACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTTCTGCCTCCAAGTTACACATGTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01657", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-NJ2T.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-NJ2T*00", "sequence": "GACATTGTGATGACCCAGACTCCACTCACTTTATCAGCTACCATTGGACAATCAGCCTCCATCTCTTGCAGGTCAAGTCAGAGTCTCTTACATAGTAATGGAAACACATACTTGAATTGGTTTCTACAGAGGCCAGGCCAATCTCCACAGCTTCTGATTTATGGGGTGTTTGAACGGGAATCTGGGGTTCCTGACAGGTTCAGTGGCAGTGGGTCAGGAACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCATGCAAGCTACCTATGAACCTC", "coding_sequence": "GACATTGTGATGACCCAGACTCCACTCACTTTATCAGCTACCATTGGACAATCAGCCTCCATCTCTTGCAGGTCAAGTCAGAGTCTCTTACATAGTAATGGAAACACATACTTGAATTGGTTTCTACAGAGGCCAGGCCAATCTCCACAGCTTCTGATTTATGGGGTGTTTGAACGGGAATCTGGGGTTCCTGACAGGTTCAGTGGCAGTGGGTCAGGAACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCATGCAAGCTACCTATGAACCTC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-35*01_S0416_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 301, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACCCAGACTCCACTCACTTTATCAGCTACCATTGGACAATCAGCCTCCATCTCTTGCAGGTCAAGTCAGAGTCTCTTACATAGTAATGGAAACACATACTTGAATTGGTTTCTACAGAGGCCAGGCCAATCTCCACAGCTTCTGATTTATGGGGTGTTTGAACGGGAATCTGGGGTTCCTGACAGGTTCAGTGGCAGTGGGTCAGGAACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCATGCAAGCTACCTATGAACCTC", "aligned_sequence": "GACATTGTGATGACCCAGACTCCACTCACTTTATCAGCTACCATTGGACAATCAGCCTCCATCTCTTGCAGGTCAAGTCAGAGTCTCTTACATAGT...AATGGAAACACATACTTGAATTGGTTTCTACAGAGGCCAGGCCAATCTCCACAGCTTCTGATTTATGGGGTG.....................TTTGAACGGGAATCTGGGGTTCCT...GACAGGTTCAGTGGCAGTGGG......TCAGGAACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCATGCAAGCTACCTATGAACCTC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01619", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-NQPT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-NQPT*00", "sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAAGGCCAGCCAGAGTATCAATTATTACGGTGATAATTATATGCACTGGTTCCAACAGAAACCAGGACAGCCAACCAAACTCCTTATCTATGATGCATCCAACCTAGAATCTGGAGTTCCTGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCAGCAAAGCAAGGAGTTTCCTCC", "coding_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAAGGCCAGCCAGAGTATCAATTATTACGGTGATAATTATATGCACTGGTTCCAACAGAAACCAGGACAGCCAACCAAACTCCTTATCTATGATGCATCCAACCTAGAATCTGGAGTTCCTGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCAGCAAAGCAAGGAGTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-4*01_S3473_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAAGGCCAGCCAGAGTATCAATTATTACGGTGATAATTATATGCACTGGTTCCAACAGAAACCAGGACAGCCAACCAAACTCCTTATCTATGATGCATCCAACCTAGAATCTGGAGTTCCTGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCAGCAAAGCAAGGAGTTTCCTCC", "aligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAAGGCCAGCCAGAGTATCAATTAT......TACGGTGATAATTATATGCACTGGTTCCAACAGAAACCAGGACAGCCAACCAAACTCCTTATCTATGATGCA.....................TCCAACCTAGAATCTGGAGTTCCT...GACAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACCCTCAACATCCATCCTGTGGAGGAGGAGGATGCTGCAACCTATTACTGTCAGCAAAGCAAGGAGTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01639", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-O366.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-O366*00", "sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAAACCTATTTGAATTGGTTATTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGAACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCGTGCAAGGTACACATTTTCCTCA", "coding_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAAACCTATTTGAATTGGTTATTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGAACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCGTGCAAGGTACACATTTTCCTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-133*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGTAATGGAAAAACCTATTTGAATTGGTTATTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTGTCTAAACTGGACTCTGGAGTCCCTGACAGGTTCACTGGCAGTGGATCAGGAACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCGTGCAAGGTACACATTTTCCTCA", "aligned_sequence": "GATGTTGTGATGACCCAGACTCCACTCACTTTGTCGGTTACCATTGGACAACCAGCCTCTATCTCTTGCAAGTCAAGTCAGAGCCTCTTATATAGT...AATGGAAAAACCTATTTGAATTGGTTATTACAGAGGCCAGGCCAGTCTCCAAAGCGCCTAATCTATCTGGTG.....................TCTAAACTGGACTCTGGAGTCCCT...GACAGGTTCACTGGCAGTGGA......TCAGGAACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATTTGGGAGTTTATTACTGCGTGCAAGGTACACATTTTCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01659", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-OC5U.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-OC5U*00", "sequence": "AACATTATGATGACACAGTCGCCATCATCTCTGGCTGTGTCTGCAGGAGAAAAGGTCACTATGAGCTGTAAGTCCAGTCAAAGTGTTTTATACAGTTCAAATCAGAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGTGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTTACTCTTACCATCAGCAGTGTACAAGCTGAAGACCTGGCAGTTTATTACTGTCATCAATACCTCTCCTCG", "coding_sequence": "AACATTATGATGACACAGTCGCCATCATCTCTGGCTGTGTCTGCAGGAGAAAAGGTCACTATGAGCTGTAAGTCCAGTCAAAGTGTTTTATACAGTTCAAATCAGAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGTGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTTACTCTTACCATCAGCAGTGTACAAGCTGAAGACCTGGCAGTTTATTACTGTCATCAATACCTCTCCTCG", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-27*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 300, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AACATTATGATGACACAGTCGCCATCATCTCTGGCTGTGTCTGCAGGAGAAAAGGTCACTATGAGCTGTAAGTCCAGTCAAAGTGTTTTATACAGTTCAAATCAGAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGTGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTTACTCTTACCATCAGCAGTGTACAAGCTGAAGACCTGGCAGTTTATTACTGTCATCAATACCTCTCCTCG", "aligned_sequence": "AACATTATGATGACACAGTCGCCATCATCTCTGGCTGTGTCTGCAGGAGAAAAGGTCACTATGAGCTGTAAGTCCAGTCAAAGTGTTTTATACAGTTCAAATCAGAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCA.....................TCCACTAGGGAATCTGGTGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTTACTCTTACCATCAGCAGTGTACAAGCTGAAGACCTGGCAGTTTATTACTGTCATCAATACCTCTCCTCG", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01655", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-OD7S.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-OD7S*00", "sequence": "GAAATCCAGATGACCCAGTCTCCATCCTCTATGTCTGCATCTCTGGGAGACAGAATAACCATCACTTGCCAGGCAACTCAAGACATTGTTAAGAATTTAAACTGGTATCAGCAGAAACCAGGGAAACCCCCTTCATTCCTGATCTATTATGCAACTGAACTGGCAGAAGGGGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGACTATTCTCTGACAATCAGCAACCTGGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGTTTTATGAGTTTCCTCC", "coding_sequence": "GAAATCCAGATGACCCAGTCTCCATCCTCTATGTCTGCATCTCTGGGAGACAGAATAACCATCACTTGCCAGGCAACTCAAGACATTGTTAAGAATTTAAACTGGTATCAGCAGAAACCAGGGAAACCCCCTTCATTCCTGATCTATTATGCAACTGAACTGGCAGAAGGGGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGACTATTCTCTGACAATCAGCAACCTGGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGTTTTATGAGTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV14-130*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATCCAGATGACCCAGTCTCCATCCTCTATGTCTGCATCTCTGGGAGACAGAATAACCATCACTTGCCAGGCAACTCAAGACATTGTTAAGAATTTAAACTGGTATCAGCAGAAACCAGGGAAACCCCCTTCATTCCTGATCTATTATGCAACTGAACTGGCAGAAGGGGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGTCAGACTATTCTCTGACAATCAGCAACCTGGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGTTTTATGAGTTTCCTCC", "aligned_sequence": "GAAATCCAGATGACCCAGTCTCCATCCTCTATGTCTGCATCTCTGGGAGACAGAATAACCATCACTTGCCAGGCAACTCAAGACATT..................GTTAAGAATTTAAACTGGTATCAGCAGAAACCAGGGAAACCCCCTTCATTCCTGATCTATTATGCA.....................ACTGAACTGGCAGAAGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGG......TCTGGGTCAGACTATTCTCTGACAATCAGCAACCTGGAGTCTGAAGATTTTGCAGACTATTACTGTCTACAGTTTTATGAGTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01607", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-OPFI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-OPFI*00", "sequence": "GACATTGTGATGTCACAGTCTCCATCCGCCCTAGCTGTGTCAGTTGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTATATAGTAGCAATCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGTTAATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGACCGCTTCACAGGCAGTAGATCAGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCCGTTTATTACTGCAAGCAATCTTATAGCTATCCTC", "coding_sequence": "GACATTGTGATGTCACAGTCTCCATCCGCCCTAGCTGTGTCAGTTGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTATATAGTAGCAATCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGTTAATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGACCGCTTCACAGGCAGTAGATCAGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCCGTTTATTACTGCAAGCAATCTTATAGCTATCCTC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-30*01_S0907_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 304, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGTCACAGTCTCCATCCGCCCTAGCTGTGTCAGTTGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTATATAGTAGCAATCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGTTAATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGACCGCTTCACAGGCAGTAGATCAGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCCGTTTATTACTGCAAGCAATCTTATAGCTATCCTC", "aligned_sequence": "GACATTGTGATGTCACAGTCTCCATCCGCCCTAGCTGTGTCAGTTGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGCCTTTTATATAGTAGCAATCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGTTAATCTACTGGGCA.....................TCCACTAGGGAATCTGGGGTCCCT...GACCGCTTCACAGGCAGTAGA......TCAGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCCGTTTATTACTGCAAGCAATCTTATAGCTATCCTC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01656", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-PFBX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-PFBX*00", "sequence": "ACTGGAGAAACAACACAGTCTCCAGCTTCTCTGAGTTTTTCTCTTGGTGAAACAGCAACACTGTCATGCAGGTCCAGTGAGAGTGTTGGCAGCTACTTAGCCTGGTACCAGCAGAAAGCAGAGCAAGTTCCCCGGCTCCTTATCCATAGTGCCTCCACTAGGGCCGGTGGTGTCCCAGTCCGATTCAGTGGCACTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGTCTAGAACCTGAAGATGCTGCAGTTTACTACTGTCAACCTTTCAAAAGTTGGTCATA", "coding_sequence": "ACTGGAGAAACAACACAGTCTCCAGCTTCTCTGAGTTTTTCTCTTGGTGAAACAGCAACACTGTCATGCAGGTCCAGTGAGAGTGTTGGCAGCTACTTAGCCTGGTACCAGCAGAAAGCAGAGCAAGTTCCCCGGCTCCTTATCCATAGTGCCTCCACTAGGGCCGGTGGTGTCCCAGTCCGATTCAGTGGCACTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGTCTAGAACCTGAAGATGCTGCAGTTTACTACTGTCAACCTTTCAAAAGTTGGTCATA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV18-36*01_S0889_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "ACTGGAGAAACAACACAGTCTCCAGCTTCTCTGAGTTTTTCTCTTGGTGAAACAGCAACACTGTCATGCAGGTCCAGTGAGAGTGTTGGCAGCTACTTAGCCTGGTACCAGCAGAAAGCAGAGCAAGTTCCCCGGCTCCTTATCCATAGTGCCTCCACTAGGGCCGGTGGTGTCCCAGTCCGATTCAGTGGCACTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGTCTAGAACCTGAAGATGCTGCAGTTTACTACTGTCAACCTTTCAAAAGTTGGTCATA", "aligned_sequence": "ACTGGAGAAACAACACAGTCTCCAGCTTCTCTGAGTTTTTCTCTTGGTGAAACAGCAACACTGTCATGCAGGTCCAGTGAGAGTGTT..................GGCAGCTACTTAGCCTGGTACCAGCAGAAAGCAGAGCAAGTTCCCCGGCTCCTTATCCATAGTGCC.....................TCCACTAGGGCCGGTGGTGTCCCA...GTCCGATTCAGTGGCACTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGTCTAGAACCTGAAGATGCTGCAGTTTACTACTGTCAACCTTTCAAAAGTTGGTCATA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01601", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-PHCR.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-PHCR*00", "sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGCGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACAACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAAGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "coding_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGCGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACAACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAAGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV5-43*01_S9511_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGCGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATTAGCAACAACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAGTCCATCTCTGGGATCCCCTCCAAGTTCAGTGGCAGTGGATCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "aligned_sequence": "GATATTGTGCTAACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGCGTCAGTCTTTCCTGCAGGGCCAGCCAAAGTATT..................AGCAACAACCTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCT.....................TCCCAGTCCATCTCTGGGATCCCC...TCCAAGTTCAGTGGCAGTGGA......TCAGGGACAGATTTCACTCTCAGTATCAACAGTGTGGAGACTGAAGATTTTGGAATGTATTTCTGTCAACAGAGTAACAGCTGGCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01591", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-PKZX.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-PKZX*00", "sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCAGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATCATTATGGTACTCCTCC", "coding_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCAGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATCATTATGGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-44*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCAAAAACCTTAGCAGAAGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATCATTATGGTACTCCTCC", "aligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATT..................TACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATAATGCA.....................AAAACCTTAGCAGAAGGTGTGCCA...TCAAGGTTCAGTGGCAGTGGA......TCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATCATTATGGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01581", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-PTVN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-PTVN*00", "sequence": "AACATTGTAATGACCCAATCTCCCAAATCCATGTCCATGTCAGTAGGAGAGAGGGTCACCTTGAGCTGCAAGGCCAGTGAGAATGTGGGTACTTATGTATCCTGGTATCAACAGAAACCAGAGCAGTCTCCTAAACTGCTGATATACGGGGCATCCAACCGGTACACTGGGGTCCCCGATCGCTTCACAGGCAGTGGATCTGCAACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTTGCAGATTATTACTGTGGACAGAGTTACAGCTATCCTCC", "coding_sequence": "AACATTGTAATGACCCAATCTCCCAAATCCATGTCCATGTCAGTAGGAGAGAGGGTCACCTTGAGCTGCAAGGCCAGTGAGAATGTGGGTACTTATGTATCCTGGTATCAACAGAAACCAGAGCAGTCTCCTAAACTGCTGATATACGGGGCATCCAACCGGTACACTGGGGTCCCCGATCGCTTCACAGGCAGTGGATCTGCAACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTTGCAGATTATTACTGTGGACAGAGTTACAGCTATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-20*01_S2082_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AACATTGTAATGACCCAATCTCCCAAATCCATGTCCATGTCAGTAGGAGAGAGGGTCACCTTGAGCTGCAAGGCCAGTGAGAATGTGGGTACTTATGTATCCTGGTATCAACAGAAACCAGAGCAGTCTCCTAAACTGCTGATATACGGGGCATCCAACCGGTACACTGGGGTCCCCGATCGCTTCACAGGCAGTGGATCTGCAACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTTGCAGATTATTACTGTGGACAGAGTTACAGCTATCCTCC", "aligned_sequence": "AACATTGTAATGACCCAATCTCCCAAATCCATGTCCATGTCAGTAGGAGAGAGGGTCACCTTGAGCTGCAAGGCCAGTGAGAATGTG..................GGTACTTATGTATCCTGGTATCAACAGAAACCAGAGCAGTCTCCTAAACTGCTGATATACGGGGCA.....................TCCAACCGGTACACTGGGGTCCCC...GATCGCTTCACAGGCAGTGGA......TCTGCAACAGATTTCACTCTGACCATCAGCAGTGTGCAGGCTGAAGACCTTGCAGATTATTACTGTGGACAGAGTTACAGCTATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01592", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-Q4TS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-Q4TS*00", "sequence": "GATGTTTTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCATTGTACATAGTAATGGAAACACCTATTTAGAATGGTACCTGCAGAAACCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTACTGCTTTCAAGGTTCACATGTTCCTCC", "coding_sequence": "GATGTTTTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCATTGTACATAGTAATGGAAACACCTATTTAGAATGGTACCTGCAGAAACCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTACTGCTTTCAAGGTTCACATGTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-117*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTTTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCATTGTACATAGTAATGGAAACACCTATTTAGAATGGTACCTGCAGAAACCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTACTGCTTTCAAGGTTCACATGTTCCTCC", "aligned_sequence": "GATGTTTTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCATTGTACATAGT...AATGGAAACACCTATTTAGAATGGTACCTGCAGAAACCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTT.....................TCCAACCGATTTTCTGGGGTCCCA...GACAGGTTCAGTGGCAGTGGA......TCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTACTGCTTTCAAGGTTCACATGTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01634", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-QDBO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-QDBO*00", "sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCGTGGCTACAGGAGAAAAAGTCACTATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGCACAGATTTTGTTTTTACAATTGAAAACACGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACATGCCTCT", "coding_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCGTGGCTACAGGAGAAAAAGTCACTATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGCACAGATTTTGTTTTTACAATTGAAAACACGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACATGCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV17-127*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCGTGGCTACAGGAGAAAAAGTCACTATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGCACAGATTTTGTTTTTACAATTGAAAACACGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACATGCCTCT", "aligned_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCGTGGCTACAGGAGAAAAAGTCACTATCAGATGCATAACCAGCACTGATATT..................GATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGC.....................AATACTCTTCGTCCTGGAGTCCCA...TCCCGATTCTCCAGCAGTGGC......TATGGCACAGATTTTGTTTTTACAATTGAAAACACGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACATGCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01632", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-QLMA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-QLMA*00", "sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGAGTGTGTCAGCAGGAGATAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTAGAAACCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCATGGCAGCCTCCTAAACTGCTGATCTACGGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCC", "coding_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGAGTGTGTCAGCAGGAGATAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTAGAAACCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCATGGCAGCCTCCTAAACTGCTGATCTACGGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-28*02_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGAGTGTGTCAGCAGGAGATAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTAGAAACCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCATGGCAGCCTCCTAAACTGCTGATCTACGGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCC", "aligned_sequence": "GACATTGTGATGACACAGTCTCCATCCTCCCTGAGTGTGTCAGCAGGAGATAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTGTTAAACAGTAGAAACCAAAAGAACTACTTGGCCTGGTACCAGCAGAAACCATGGCAGCCTCCTAAACTGCTGATCTACGGGGCA.....................TCCACTAGGGAATCTGGGGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGAACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGTCAGAATGATTATAGTTATCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01598", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-RPJ7.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-RPJ7*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGCAGAAAGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAATTACATGCACTGGTACCAGCAGAAGCTAGGATCCTCCCCCAAACTCTGGATTTATGACACATCCAAACTGGCTCCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCTCTTATTTCTGCCATCAGTGGAGTAGTTACCCACCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGCAGAAAGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAATTACATGCACTGGTACCAGCAGAAGCTAGGATCCTCCCCCAAACTCTGGATTTATGACACATCCAAACTGGCTCCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCTCTTATTTCTGCCATCAGTGGAGTAGTTACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-56*01_S5696_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGCAGAAAGTCACCATAACCTGCAGTGCCAGCTCAAGTGTAAATTACATGCACTGGTACCAGCAGAAGCTAGGATCCTCCCCCAAACTCTGGATTTATGACACATCCAAACTGGCTCCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCTCTTATTTCTGCCATCAGTGGAGTAGTTACCCACCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGCAGAAAGTCACCATAACCTGCAGTGCCAGCTCAAGTGTA.....................AATTACATGCACTGGTACCAGCAGAAGCTAGGATCCTCCCCCAAACTCTGGATTTATGACACA.....................TCCAAACTGGCTCCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCTCTTATTTCTGCCATCAGTGGAGTAGTTACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01587", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-RUQU.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-RUQU*00", "sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAATTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTATGGTACTCCTCC", "coding_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAATTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTATGGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-46*01_S4541_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAATTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTATGGTACTCCTCC", "aligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATT..................TACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCA.....................ACAAATTTAGCAGATGGTGTGCCA...TCAAGGTTCAGTGGCAGTGGA......TCAGGCACACAGTTTTCTCTGAAGATCAACAGCCTGCAGCCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTATGGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01645", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-RXCT.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-RXCT*00", "sequence": "GACATTGTGATGACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGGGTCTCTCTTTCCTGCAGGGCCAGTCAGAGTATTAGCGACTACTTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAATCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGTCAGATTTCACTCTCAGTATCAACAGTGTGGAACCTGAAGATGTTGGAGTGTATTACTGTCAAAATGGTCACAGCTTTCCTCC", "coding_sequence": "GACATTGTGATGACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGGGTCTCTCTTTCCTGCAGGGCCAGTCAGAGTATTAGCGACTACTTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAATCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGTCAGATTTCACTCTCAGTATCAACAGTGTGGAACCTGAAGATGTTGGAGTGTATTACTGTCAAAATGGTCACAGCTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV5-39*01_S3142_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGGGTCTCTCTTTCCTGCAGGGCCAGTCAGAGTATTAGCGACTACTTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCTTCCCAATCCATCTCTGGGATCCCCTCCAGGTTCAGTGGCAGTGGATCAGGGTCAGATTTCACTCTCAGTATCAACAGTGTGGAACCTGAAGATGTTGGAGTGTATTACTGTCAAAATGGTCACAGCTTTCCTCC", "aligned_sequence": "GACATTGTGATGACTCAGTCTCCAGCCACCCTGTCTGTGACTCCAGGAGATAGGGTCTCTCTTTCCTGCAGGGCCAGTCAGAGTATT..................AGCGACTACTTACACTGGTATCAACAAAAATCACATGAGTCTCCAAGGCTTCTCATCAAGTATGCT.....................TCCCAATCCATCTCTGGGATCCCC...TCCAGGTTCAGTGGCAGTGGA......TCAGGGTCAGATTTCACTCTCAGTATCAACAGTGTGGAACCTGAAGATGTTGGAGTGTATTACTGTCAAAATGGTCACAGCTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01599", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-RYSO.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-RYSO*00", "sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGTATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAACTTAGCAGATGGTGTTCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCCCTCAAGATCAACAGCCTGCAGTCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTGGGGTACTCCTCC", "coding_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGTATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAACTTAGCAGATGGTGTTCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCCCTCAAGATCAACAGCCTGCAGTCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTGGGGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-46*01_S4026_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGTATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTTACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACAAACTTAGCAGATGGTGTTCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCCCTCAAGATCAACAGCCTGCAGTCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTGGGGTACTCCTCC", "aligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTATCTGTATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATT..................TACAGTAATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCA.....................ACAAACTTAGCAGATGGTGTTCCA...TCAAGGTTCAGTGGCAGTGGA......TCAGGCACACAGTATTCCCTCAAGATCAACAGCCTGCAGTCTGAAGATTTTGGGAGTTATTACTGTCAACATTTTTGGGGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01586", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-SAZU.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-SAZU*00", "sequence": "GACATTGTGATGTCACAGTCTCCATCCTCCCTGGCTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAATCCAGTCAGAGTCTGTTCAACAGTAGAACCCGAAAGAACTACTTGGCTTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGCAAGCAATCTTATTATCTTCC", "coding_sequence": "GACATTGTGATGTCACAGTCTCCATCCTCCCTGGCTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAATCCAGTCAGAGTCTGTTCAACAGTAGAACCCGAAAGAACTACTTGGCTTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGCAAGCAATCTTATTATCTTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-21*01_S1419_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGATGTCACAGTCTCCATCCTCCCTGGCTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAATCCAGTCAGAGTCTGTTCAACAGTAGAACCCGAAAGAACTACTTGGCTTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCATCCACTAGGGAATCTGGGGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGCAAGCAATCTTATTATCTTCC", "aligned_sequence": "GACATTGTGATGTCACAGTCTCCATCCTCCCTGGCTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAATCCAGTCAGAGTCTGTTCAACAGTAGAACCCGAAAGAACTACTTGGCTTGGTACCAGCAGAAACCAGGGCAGTCTCCTAAACTGCTGATCTACTGGGCA.....................TCCACTAGGGAATCTGGGGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGTGTGCAGGCTGAAGACCTGGCAGTTTATTACTGCAAGCAATCTTATTATCTTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01626", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-SG5Q.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-SG5Q*00", "sequence": "GATATTGTGATAACCCAGGATGAACTCTCCAATCCTGTCACTTCTGGAGAATCAGTTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTATATAAGGATGGGAAGACATACTTGAATTGGTTTCTGCAGAGACCAGGACAATCTCCTCAGCTCCTGATCTATTTGATGTCCACCCGTGCATCAGGAGTCTCAGACCGGTTTAGTGGCAGTGGGTCAGGAACAGATTTCACCCTGGAAATCAGTAGAGTGAAGGCTGAGGATGTGGGTGTGTATTACTGTCAACAACTTGTAGAGTATCCT", "coding_sequence": "GATATTGTGATAACCCAGGATGAACTCTCCAATCCTGTCACTTCTGGAGAATCAGTTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTATATAAGGATGGGAAGACATACTTGAATTGGTTTCTGCAGAGACCAGGACAATCTCCTCAGCTCCTGATCTATTTGATGTCCACCCGTGCATCAGGAGTCTCAGACCGGTTTAGTGGCAGTGGGTCAGGAACAGATTTCACCCTGGAAATCAGTAGAGTGAAGGCTGAGGATGTGGGTGTGTATTACTGTCAACAACTTGTAGAGTATCCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV2-112*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 300, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATAACCCAGGATGAACTCTCCAATCCTGTCACTTCTGGAGAATCAGTTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTATATAAGGATGGGAAGACATACTTGAATTGGTTTCTGCAGAGACCAGGACAATCTCCTCAGCTCCTGATCTATTTGATGTCCACCCGTGCATCAGGAGTCTCAGACCGGTTTAGTGGCAGTGGGTCAGGAACAGATTTCACCCTGGAAATCAGTAGAGTGAAGGCTGAGGATGTGGGTGTGTATTACTGTCAACAACTTGTAGAGTATCCT", "aligned_sequence": "GATATTGTGATAACCCAGGATGAACTCTCCAATCCTGTCACTTCTGGAGAATCAGTTTCCATCTCCTGCAGGTCTAGTAAGAGTCTCCTATATAAG...GATGGGAAGACATACTTGAATTGGTTTCTGCAGAGACCAGGACAATCTCCTCAGCTCCTGATCTATTTGATG.....................TCCACCCGTGCATCAGGAGTCTCA...GACCGGTTTAGTGGCAGTGGG......TCAGGAACAGATTTCACCCTGGAAATCAGTAGAGTGAAGGCTGAGGATGTGGGTGTGTATTACTGTCAACAACTTGTAGAGTATCCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01585", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-TGAG.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-TGAG*00", "sequence": "GACATCCAGATGACTCAGTCTCCAGCTTCCCTGTCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTGACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACACTCTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCTCTCAAGATCAACAGCCTGCAGTCTGAAGATGTTGCGAGATATTACTGTCAACATTATTATAGTACTCCTCC", "coding_sequence": "GACATCCAGATGACTCAGTCTCCAGCTTCCCTGTCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTGACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACACTCTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCTCTCAAGATCAACAGCCTGCAGTCTGAAGATGTTGCGAGATATTACTGTCAACATTATTATAGTACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-46*01_S1254_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCTTCCCTGTCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATTGACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCAACACTCTTAGCAGATGGTGTGCCATCAAGGTTCAGTGGCAGTGGATCAGGCACACAGTATTCTCTCAAGATCAACAGCCTGCAGTCTGAAGATGTTGCGAGATATTACTGTCAACATTATTATAGTACTCCTCC", "aligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCTTCCCTGTCTGCATCTGTGGGAGAAACTGTCACCATCACATGTCGAGCAAGTGAGAATATT..................GACAGTTATTTAGCATGGTATCAGCAGAAACAGGGAAAATCTCCTCAGCTCCTGGTCTATGCTGCA.....................ACACTCTTAGCAGATGGTGTGCCA...TCAAGGTTCAGTGGCAGTGGA......TCAGGCACACAGTATTCTCTCAAGATCAACAGCCTGCAGTCTGAAGATGTTGCGAGATATTACTGTCAACATTATTATAGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01660", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-TYZI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-TYZI*00", "sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGATCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTAATCCTGTGGAGGCTGATGATGTTGCAACCTATTACTGTCAGCAAAGTAATGAGGATCCTCC", "coding_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGATCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTAATCCTGTGGAGGCTGATGATGTTGCAACCTATTACTGTCAGCAAAGTAATGAGGATCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-5*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGTTATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCATCCAACCTAGAATCTGGGATCCCTGCCAGGTTCAGTGGCAGTGGGTCTAGGACAGACTTCACCCTCACCATTAATCCTGTGGAGGCTGATGATGTTGCAACCTATTACTGTCAGCAAAGTAATGAGGATCCTCC", "aligned_sequence": "GACATTGTGCTGACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGGGCCACCATATCCTGCAGAGCCAGTGAAAGTGTTGATAGT......TATGGCAATAGTTTTATGCACTGGTACCAGCAGAAACCAGGACAGCCACCCAAACTCCTCATCTATCGTGCA.....................TCCAACCTAGAATCTGGGATCCCT...GCCAGGTTCAGTGGCAGTGGG......TCTAGGACAGACTTCACCCTCACCATTAATCCTGTGGAGGCTGATGATGTTGCAACCTATTACTGTCAGCAAAGTAATGAGGATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01615", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-TZSN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-TZSN*00", "sequence": "GAAATTGTGCTTACCCAGTCTCCAACCACCATGGCTGCATCTCCTGGGGAGAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTATAAGTTCCAATTACTTGCACTGGTATCAGCAGAAGCCAGGATTCCCTCCTAAACTCTTGATATATAGGACATCCAATCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATTGGCACCATGGAGGCTGAAGGTGCTGCCACTTATTACTGCCAGCATGGTAGTAGTTTACTACGCA", "coding_sequence": "GAAATTGTGCTTACCCAGTCTCCAACCACCATGGCTGCATCTCCTGGGGAGAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTATAAGTTCCAATTACTTGCACTGGTATCAGCAGAAGCCAGGATTCCCTCCTAAACTCTTGATATATAGGACATCCAATCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATTGGCACCATGGAGGCTGAAGGTGCTGCCACTTATTACTGCCAGCATGGTAGTAGTTTACTACGCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-91*01_S4811_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTTACCCAGTCTCCAACCACCATGGCTGCATCTCCTGGGGAGAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTATAAGTTCCAATTACTTGCACTGGTATCAGCAGAAGCCAGGATTCCCTCCTAAACTCTTGATATATAGGACATCCAATCTGGCTTCTGGAGTCCCAGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATTGGCACCATGGAGGCTGAAGGTGCTGCCACTTATTACTGCCAGCATGGTAGTAGTTTACTACGCA", "aligned_sequence": "GAAATTGTGCTTACCCAGTCTCCAACCACCATGGCTGCATCTCCTGGGGAGAAGGTCACCATCACCTGCAGTGCCAGCTCAAGTATAAGT...............TCCAATTACTTGCACTGGTATCAGCAGAAGCCAGGATTCCCTCCTAAACTCTTGATATATAGGACA.....................TCCAATCTGGCTTCTGGAGTCCCA...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATTGGCACCATGGAGGCTGAAGGTGCTGCCACTTATTACTGCCAGCATGGTAGTAGTTTACTACGCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01588", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-U7PS.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-U7PS*00", "sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCCTGTATCAGCAGGAGACAGGGTTACCATGACCTGCAAGGCCAGTCAGAGTGTGGGTAATAATGTAGCCTGGTACCAACAGAAGCCAGGACAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATCTGGGACAGATTTCACTTTCACCATCAGCAGTGTGCAGGTTGAAGACCTGGCAGTTTATTTCTGTCAGCAGCATTATAGCTCTCCTCC", "coding_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCCTGTATCAGCAGGAGACAGGGTTACCATGACCTGCAAGGCCAGTCAGAGTGTGGGTAATAATGTAGCCTGGTACCAACAGAAGCCAGGACAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATCTGGGACAGATTTCACTTTCACCATCAGCAGTGTGCAGGTTGAAGACCTGGCAGTTTATTTCTGTCAGCAGCATTATAGCTCTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-b*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCCTGTATCAGCAGGAGACAGGGTTACCATGACCTGCAAGGCCAGTCAGAGTGTGGGTAATAATGTAGCCTGGTACCAACAGAAGCCAGGACAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGGAGTCCCTGATCGCTTCACTGGCAGTGGATCTGGGACAGATTTCACTTTCACCATCAGCAGTGTGCAGGTTGAAGACCTGGCAGTTTATTTCTGTCAGCAGCATTATAGCTCTCCTCC", "aligned_sequence": "AGTATTGTGATGACCCAGACTCCCAAATTCCTGCCTGTATCAGCAGGAGACAGGGTTACCATGACCTGCAAGGCCAGTCAGAGTGTG..................GGTAATAATGTAGCCTGGTACCAACAGAAGCCAGGACAGTCTCCTAAACTGCTGATATACTATGCA.....................TCCAATCGCTACACTGGAGTCCCT...GATCGCTTCACTGGCAGTGGA......TCTGGGACAGATTTCACTTTCACCATCAGCAGTGTGCAGGTTGAAGACCTGGCAGTTTATTTCTGTCAGCAGCATTATAGCTCTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01622", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-UJUV.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-UJUV*00", "sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAGGTTCCAGTTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTACGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTTGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGATGCAACTTATTACTGCCAGCAGGGGTGGGATTACCCACTCA", "coding_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAGGTTCCAGTTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTACGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTTGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGATGCAACTTATTACTGCCAGCAGGGGTGGGATTACCCACTCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-57-1*01_S1729_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 292, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAGGTTCCAGTTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTACGGCACATCCAACCTGGCTTCTGGAGTCCCTGCTTGCTTCAGTGGCAGTGGGTCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGATGCAACTTATTACTGCCAGCAGGGGTGGGATTACCCACTCA", "aligned_sequence": "GAAATTGTGCTCACCCAGTCTCCAGCACTCATGGCTGCATCTCCAGGGGAGAAGGTCACCATGACCTGCAGTGCCAGCTCAAGTGTAGGT...............TCCAGTTACTTGCACTGGTACCAGCAGAAGTCAGGAGCCTCCCCCAAACTCTGGATTTACGGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...GCTTGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTACTCTCTCACAATCAGCAGCGTGGAGGCTGAAGATGATGCAACTTATTACTGCCAGCAGGGGTGGGATTACCCACTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01610", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ULOI.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ULOI*00", "sequence": "GACATTTTGATGACTCAGTCTCCATCCTCCCTGACTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTTTTAGCTAGTGCCAACCAAAATAACTACTTGGCCTGGCACCAGCAGAAACCAGGACGATCTCCTAAAATGCTGATAATTTGGGCATCCACTAGGGTATCTGGAGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACGGATTTCACTCTGACCATCAACAGTGTGCAGGCTGAAGATCTGGCTGTTTATTACTGTCAGCAGTCCTACAGCGCTCCTAC", "coding_sequence": "GACATTTTGATGACTCAGTCTCCATCCTCCCTGACTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTTTTAGCTAGTGCCAACCAAAATAACTACTTGGCCTGGCACCAGCAGAAACCAGGACGATCTCCTAAAATGCTGATAATTTGGGCATCCACTAGGGTATCTGGAGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACGGATTTCACTCTGACCATCAACAGTGTGCAGGCTGAAGATCTGGCTGTTTATTACTGTCAGCAGTCCTACAGCGCTCCTAC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV8-34*01_S3615_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 305, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTTTGATGACTCAGTCTCCATCCTCCCTGACTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTTTTAGCTAGTGCCAACCAAAATAACTACTTGGCCTGGCACCAGCAGAAACCAGGACGATCTCCTAAAATGCTGATAATTTGGGCATCCACTAGGGTATCTGGAGTCCCTGATCGCTTCATAGGCAGTGGATCTGGGACGGATTTCACTCTGACCATCAACAGTGTGCAGGCTGAAGATCTGGCTGTTTATTACTGTCAGCAGTCCTACAGCGCTCCTAC", "aligned_sequence": "GACATTTTGATGACTCAGTCTCCATCCTCCCTGACTGTGTCAGCAGGAGAGAAGGTCACTATGAGCTGCAAGTCCAGTCAGAGTCTTTTAGCTAGTGCCAACCAAAATAACTACTTGGCCTGGCACCAGCAGAAACCAGGACGATCTCCTAAAATGCTGATAATTTGGGCA.....................TCCACTAGGGTATCTGGAGTCCCT...GATCGCTTCATAGGCAGTGGA......TCTGGGACGGATTTCACTCTGACCATCAACAGTGTGCAGGCTGAAGATCTGGCTGTTTATTACTGTCAGCAGTCCTACAGCGCTCCTAC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01649", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-VCOM.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-VCOM*00", "sequence": "TGCATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGAGTACTGCTGTAGCCTGGTATCAACAAAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "coding_sequence": "TGCATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGAGTACTGCTGTAGCCTGGTATCAACAAAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV6-25*01_S3519_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "TGCATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTGAGTACTGCTGTAGCCTGGTATCAACAAAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCATCCACCCGGCACACTGGAGTCCCTGATCGCTTCACAGGCAGTGGATCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "aligned_sequence": "TGCATTGTGATGACCCAGTCTCACAAATTCATGTCCACATCAGTAGGAGACAGGGTCAGCATCACCTGCAAGGCCAGTCAGGATGTG..................AGTACTGCTGTAGCCTGGTATCAACAAAAACCAGGGCAATCTCCTAAACTACTGATTTACTGGGCA.....................TCCACCCGGCACACTGGAGTCCCT...GATCGCTTCACAGGCAGTGGA......TCTGGGACAGATTTCACTCTTACCATCAGCAGTGTGCAGGCTGAAGACCTGGCACTTTATTACTGTCAGCAACATTATAGCACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01647", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-VSWF.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-VSWF*00", "sequence": "GACATCCAAATGACCCAGTCCTCATCATTTCTCTCTGCATCTCTAGGAGATCATCTTACAATCAACTGCAGGGCCAGTAAGGATATTAACAAGTATTTTGCTTGGGTTCAACAGAAGCCAGGGAAGGCTCCAAGGATGTTGATTCATTTTGCTTCCACCTTGCTACCTGGGGTTCCAGAAAAGTTCAGTGGGAGTGGATCTGGGACAGATTTTTCTCTCACTATCAGAAACATAGAGTCTGAAGATATTGCAATGTATTACTGTCTACAGTATTCTGAGCATCCGTA", "coding_sequence": "GACATCCAAATGACCCAGTCCTCATCATTTCTCTCTGCATCTCTAGGAGATCATCTTACAATCAACTGCAGGGCCAGTAAGGATATTAACAAGTATTTTGCTTGGGTTCAACAGAAGCCAGGGAAGGCTCCAAGGATGTTGATTCATTTTGCTTCCACCTTGCTACCTGGGGTTCCAGAAAAGTTCAGTGGGAGTGGATCTGGGACAGATTTTTCTCTCACTATCAGAAACATAGAGTCTGAAGATATTGCAATGTATTACTGTCTACAGTATTCTGAGCATCCGTA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV16-104*01_S9985_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAAATGACCCAGTCCTCATCATTTCTCTCTGCATCTCTAGGAGATCATCTTACAATCAACTGCAGGGCCAGTAAGGATATTAACAAGTATTTTGCTTGGGTTCAACAGAAGCCAGGGAAGGCTCCAAGGATGTTGATTCATTTTGCTTCCACCTTGCTACCTGGGGTTCCAGAAAAGTTCAGTGGGAGTGGATCTGGGACAGATTTTTCTCTCACTATCAGAAACATAGAGTCTGAAGATATTGCAATGTATTACTGTCTACAGTATTCTGAGCATCCGTA", "aligned_sequence": "GACATCCAAATGACCCAGTCCTCATCATTTCTCTCTGCATCTCTAGGAGATCATCTTACAATCAACTGCAGGGCCAGTAAGGATATT..................AACAAGTATTTTGCTTGGGTTCAACAGAAGCCAGGGAAGGCTCCAAGGATGTTGATTCATTTTGCT.....................TCCACCTTGCTACCTGGGGTTCCA...GAAAAGTTCAGTGGGAGTGGA......TCTGGGACAGATTTTTCTCTCACTATCAGAAACATAGAGTCTGAAGATATTGCAATGTATTACTGTCTACAGTATTCTGAGCATCCGTA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01596", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-VX7D.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-VX7D*00", "sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGATATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACCATCAGCAACCTGGAACCTGAAGATATTGCCACTTACTATTGTCAGCAGTATAGTAAGCTTCCTCC", "coding_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGATATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACCATCAGCAACCTGGAACCTGAAGATATTGCCACTTACTATTGTCAGCAGTATAGTAAGCTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV10-94*03_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGATATTAGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACATCAAGATTACACTCAGGAGTCCCATCAAGGTTCAGTGGCAGTGGGTCTGGGACAGATTATTCTCTCACCATCAGCAACCTGGAACCTGAAGATATTGCCACTTACTATTGTCAGCAGTATAGTAAGCTTCCTCC", "aligned_sequence": "GATATCCAGATGACACAGACTACATCCTCCCTGTCTGCCTCTCTGGGAGACAGAGTCACCATCAGTTGCAGGGCAAGTCAGGATATT..................AGCAATTATTTAAACTGGTATCAGCAGAAACCAGATGGAACTGTTAAACTCCTGATCTACTACACA.....................TCAAGATTACACTCAGGAGTCCCA...TCAAGGTTCAGTGGCAGTGGG......TCTGGGACAGATTATTCTCTCACCATCAGCAACCTGGAACCTGAAGATATTGCCACTTACTATTGTCAGCAGTATAGTAAGCTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01590", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-W67N.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-W67N*00", "sequence": "GATGTTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCCTTGTACACAGTAATGGAAACACCTATTTACATTGGTACCTGCAGAAGCCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCTGCTCTCAAAGTACACATGTTCCTCC", "coding_sequence": "GATGTTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCCTTGTACACAGTAATGGAAACACCTATTTACATTGGTACCTGCAGAAGCCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCTGCTCTCAAAGTACACATGTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV1-110*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCCTTGTACACAGTAATGGAAACACCTATTTACATTGGTACCTGCAGAAGCCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTTTCCAACCGATTTTCTGGGGTCCCAGACAGGTTCAGTGGCAGTGGATCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCTGCTCTCAAAGTACACATGTTCCTCC", "aligned_sequence": "GATGTTGTGATGACCCAAACTCCACTCTCCCTGCCTGTCAGTCTTGGAGATCAAGCCTCCATCTCTTGCAGATCTAGTCAGAGCCTTGTACACAGT...AATGGAAACACCTATTTACATTGGTACCTGCAGAAGCCAGGCCAGTCTCCAAAGCTCCTGATCTACAAAGTT.....................TCCAACCGATTTTCTGGGGTCCCA...GACAGGTTCAGTGGCAGTGGA......TCAGGGACAGATTTCACACTCAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCTGCTCTCAAAGTACACATGTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01637", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-WTAN.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-WTAN*00", "sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTGGCTGCATCTGTGGGAGAAACCATCACCATCACATGTCAAGCAAGTGAGAACATTTACTTCAGTTTAGCATGGTATCAGCAGAAGCAAGGGAAATCTCCTCAGCTCCTGATCTATAATGCAAACAGCTTGGAAGATGGTGTCCCATCGAGGTTCAGTGGCAGTGGATCTGGGACACAGTATTCTATGAAGATCAACAGCATGCAGCCTGAAGATACTGCAACTTATTTCTGTAAACAGGCTTATGACTTTCCTCC", "coding_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTGGCTGCATCTGTGGGAGAAACCATCACCATCACATGTCAAGCAAGTGAGAACATTTACTTCAGTTTAGCATGGTATCAGCAGAAGCAAGGGAAATCTCCTCAGCTCCTGATCTATAATGCAAACAGCTTGGAAGATGGTGTCCCATCGAGGTTCAGTGGCAGTGGATCTGGGACACAGTATTCTATGAAGATCAACAGCATGCAGCCTGAAGATACTGCAACTTATTTCTGTAAACAGGCTTATGACTTTCCTCC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV12-38*01_S2611_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTGGCTGCATCTGTGGGAGAAACCATCACCATCACATGTCAAGCAAGTGAGAACATTTACTTCAGTTTAGCATGGTATCAGCAGAAGCAAGGGAAATCTCCTCAGCTCCTGATCTATAATGCAAACAGCTTGGAAGATGGTGTCCCATCGAGGTTCAGTGGCAGTGGATCTGGGACACAGTATTCTATGAAGATCAACAGCATGCAGCCTGAAGATACTGCAACTTATTTCTGTAAACAGGCTTATGACTTTCCTCC", "aligned_sequence": "GACATCCAGATGACTCAGTCTCCAGCCTCCCTGGCTGCATCTGTGGGAGAAACCATCACCATCACATGTCAAGCAAGTGAGAACATT..................TACTTCAGTTTAGCATGGTATCAGCAGAAGCAAGGGAAATCTCCTCAGCTCCTGATCTATAATGCA.....................AACAGCTTGGAAGATGGTGTCCCA...TCGAGGTTCAGTGGCAGTGGA......TCTGGGACACAGTATTCTATGAAGATCAACAGCATGCAGCCTGAAGATACTGCAACTTATTTCTGTAAACAGGCTTATGACTTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01593", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-XMA6.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-XMA6*00", "sequence": "GACATTGTGCTCACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGTGTCACCATCTCCTGCAGAGCCAGTGAAAGTGTTGAATATTATGGCACTAGTTTAATGCAGTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCTATGGTGCATCCAACGTAGAATCTGGGGTCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCAGCCTCAACATCCATCCTGTGGAGGAGGATGATATTGCAATGTATTTCTGTCAGCAAAGTAGGAAGGTTCCTTC", "coding_sequence": "GACATTGTGCTCACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGTGTCACCATCTCCTGCAGAGCCAGTGAAAGTGTTGAATATTATGGCACTAGTTTAATGCAGTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCTATGGTGCATCCAACGTAGAATCTGGGGTCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCAGCCTCAACATCCATCCTGTGGAGGAGGATGATATTGCAATGTATTTCTGTCAGCAAAGTAGGAAGGTTCCTTC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV3-1*01_S7345_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 299, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATTGTGCTCACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGTGTCACCATCTCCTGCAGAGCCAGTGAAAGTGTTGAATATTATGGCACTAGTTTAATGCAGTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCTATGGTGCATCCAACGTAGAATCTGGGGTCCCTGCCAGGTTTAGTGGCAGTGGGTCTGGGACAGACTTCAGCCTCAACATCCATCCTGTGGAGGAGGATGATATTGCAATGTATTTCTGTCAGCAAAGTAGGAAGGTTCCTTC", "aligned_sequence": "GACATTGTGCTCACCCAATCTCCAGCTTCTTTGGCTGTGTCTCTAGGGCAGAGTGTCACCATCTCCTGCAGAGCCAGTGAAAGTGTTGAATAT......TATGGCACTAGTTTAATGCAGTGGTACCAACAGAAACCAGGACAGCCACCCAAACTCCTCATCTATGGTGCA.....................TCCAACGTAGAATCTGGGGTCCCT...GCCAGGTTTAGTGGCAGTGGG......TCTGGGACAGACTTCAGCCTCAACATCCATCCTGTGGAGGAGGATGATATTGCAATGTATTTCTGTCAGCAAAGTAGGAAGGTTCCTTC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 108, "fwr2_start": 109, "fwr2_end": 159, "cdr2_start": 160, "cdr2_end": 168, "fwr3_start": 169, "fwr3_end": 276, "cdr3_start": 277, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01608", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-YAUA.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-YAUA*00", "sequence": "GACATCCAGATGACACAGTCTCCATCCTCACTGTCTGCATCTCTGGGAGGCAAAGTCACCATCACTTGCAAGGCAAGCCAAGACATTAACAAGAATATAGCTTGGTACCAACACAAGCCTGGAAAAGGTCCTAGGCTGCTCATATGGTACACATCTACATTACAGCCAGGCATCCCATCAAGGTTCAGTGGAAGTGGGTCTGGGAGAGATTATTCCTTCAGCATCAGCAACCTGGAGCCTGAAGATATTGCAACTTATTACTGTCTACAGTATGATAATCTTCCACC", "coding_sequence": "GACATCCAGATGACACAGTCTCCATCCTCACTGTCTGCATCTCTGGGAGGCAAAGTCACCATCACTTGCAAGGCAAGCCAAGACATTAACAAGAATATAGCTTGGTACCAACACAAGCCTGGAAAAGGTCCTAGGCTGCTCATATGGTACACATCTACATTACAGCCAGGCATCCCATCAAGGTTCAGTGGAAGTGGGTCTGGGAGAGATTATTCCTTCAGCATCAGCAACCTGGAGCCTGAAGATATTGCAACTTATTACTGTCTACAGTATGATAATCTTCCACC", "ext_3prime": null, "aliases": [ "Kos et al: IGKV19-93*01_S8964_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACACAGTCTCCATCCTCACTGTCTGCATCTCTGGGAGGCAAAGTCACCATCACTTGCAAGGCAAGCCAAGACATTAACAAGAATATAGCTTGGTACCAACACAAGCCTGGAAAAGGTCCTAGGCTGCTCATATGGTACACATCTACATTACAGCCAGGCATCCCATCAAGGTTCAGTGGAAGTGGGTCTGGGAGAGATTATTCCTTCAGCATCAGCAACCTGGAGCCTGAAGATATTGCAACTTATTACTGTCTACAGTATGATAATCTTCCACC", "aligned_sequence": "GACATCCAGATGACACAGTCTCCATCCTCACTGTCTGCATCTCTGGGAGGCAAAGTCACCATCACTTGCAAGGCAAGCCAAGACATT..................AACAAGAATATAGCTTGGTACCAACACAAGCCTGGAAAAGGTCCTAGGCTGCTCATATGGTACACA.....................TCTACATTACAGCCAGGCATCCCA...TCAAGGTTCAGTGGAAGTGGG......TCTGGGAGAGATTATTCCTTCAGCATCAGCAACCTGGAGCCTGAAGATATTGCAACTTATTACTGTCTACAGTATGATAATCTTCCACC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01636", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ZF6M.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ZF6M*00", "sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCATGGCTATAGGAGAAAAAGTCACCATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGTACAGATTTTGTTTTTACAATTGAAAACATGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACTTGCCTCT", "coding_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCATGGCTATAGGAGAAAAAGTCACCATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGTACAGATTTTGTTTTTACAATTGAAAACATGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACTTGCCTCT", "ext_3prime": null, "aliases": [ "Kos et al: IGKV17-121*01_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCATGGCTATAGGAGAAAAAGTCACCATCAGATGCATAACCAGCACTGATATTGATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGCAATACTCTTCGTCCTGGAGTCCCATCCCGATTCTCCAGCAGTGGCTATGGTACAGATTTTGTTTTTACAATTGAAAACATGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACTTGCCTCT", "aligned_sequence": "GAAACAACTGTGACCCAGTCTCCAGCATCCCTGTCCATGGCTATAGGAGAAAAAGTCACCATCAGATGCATAACCAGCACTGATATT..................GATGATGATATGAACTGGTACCAGCAGAAGCCAGGGGAACCTCCTAAGCTCCTTATTTCAGAAGGC.....................AATACTCTTCGTCCTGGAGTCCCA...TCCCGATTCTCCAGCAGTGGC......TATGGTACAGATTTTGTTTTTACAATTGAAAACATGCTCTCAGAAGATGTTGCAGATTACTACTGTTTGCAAAGTGATAACTTGCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01620", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ZM2S.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ZM2S*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCTAGGGGAGGAGATCACCCTAACCTGCAGTGCCAGCTCGAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGTCAGGCACTTCTCCCAAACTCTTGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTTCTCGCTTCAGTGGCAGTGGGTCTGGGACCTTTTATTCTCTCACAATCAGCAGTGTGGAGGCTGAAGATGCTGCCGATTATTACTGCCATCAGTGGAGTAGTTATCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCTAGGGGAGGAGATCACCCTAACCTGCAGTGCCAGCTCGAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGTCAGGCACTTCTCCCAAACTCTTGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTTCTCGCTTCAGTGGCAGTGGGTCTGGGACCTTTTATTCTCTCACAATCAGCAGTGTGGAGGCTGAAGATGCTGCCGATTATTACTGCCATCAGTGGAGTAGTTATCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-80*01_S4247_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 282, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCTAGGGGAGGAGATCACCCTAACCTGCAGTGCCAGCTCGAGTGTAAGTTACATGCACTGGTTCCAGCAGAAGTCAGGCACTTCTCCCAAACTCTTGATTTATAGCACATCCAACCTGGCTTCTGGAGTCCCTTCTCGCTTCAGTGGCAGTGGGTCTGGGACCTTTTATTCTCTCACAATCAGCAGTGTGGAGGCTGAAGATGCTGCCGATTATTACTGCCATCAGTGGAGTAGTTATCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCTAGGGGAGGAGATCACCCTAACCTGCAGTGCCAGCTCGAGTGTA.....................AGTTACATGCACTGGTTCCAGCAGAAGTCAGGCACTTCTCCCAAACTCTTGATTTATAGCACA.....................TCCAACCTGGCTTCTGGAGTCCCT...TCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTTTTATTCTCTCACAATCAGCAGTGTGGAGGCTGAAGATGCTGCCGATTATTACTGCCATCAGTGGAGTAGTTATCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null }, { "allele_description_id": "OGRDB:A01603", "allele_description_ref": "OGRDB:Mus musculus/AKR/J_IGK:IGKV-ZPKW.1", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "03-May-2022", "release_description": "This version as published in preprint at https://www.biorxiv.org/content/10.1101/2022.05.01.489089v1", "label": "IGKV0-ZPKW*00", "sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACATGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAAAGATGGATTTATGACACATCCAAACTGGATTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCTATCAGTGGAGTAGTTACCCACCCA", "coding_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACATGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAAAGATGGATTTATGACACATCCAAACTGGATTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCTATCAGTGGAGTAGTTACCCACCCA", "ext_3prime": null, "aliases": [ "Kos et al: IGKV4-59*01_S1025_AKR" ], "locus": "IGK", "chromosome": null, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:10090", "label": "Mus musculus" }, "species_subgroup": "AKR/J", "species_subgroup_type": "strain", "status": null, "gene_designation": null, "subgroup_designation": null, "allele_designation": null, "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 286, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACATGCAGTGCCAGCTCAAGTGTAAGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAAAGATGGATTTATGACACATCCAAACTGGATTCTGGAGTCCCTGCTCGCTTCAGTGGCAGTGGGTCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCTATCAGTGGAGTAGTTACCCACCCA", "aligned_sequence": "CAAATTGTTCTCACCCAGTCTCCAGCAATCATGTCTGCATCTCCAGGGGAGAAGGTCACCATGACATGCAGTGCCAGCTCAAGTGTA.....................AGTTACATGCACTGGTACCAGCAGAAGTCAGGCACCTCCCCCAAAAGATGGATTTATGACACA.....................TCCAAACTGGATTCTGGAGTCCCT...GCTCGCTTCAGTGGCAGTGGG......TCTGGGACCTCTTATTCTCTCACAATCAGCAGCATGGAGGCTGAAGATGCTGCCACTTATTACTGCTATCAGTGGAGTAGTTACCCACCCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 93, "fwr2_start": 94, "fwr2_end": 144, "cdr2_start": 145, "cdr2_end": 153, "fwr3_start": 154, "fwr3_end": 261, "cdr3_start": 262, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": null, "curational_tags": null } ], "curation": "The germline set is based on sequences published in Kos et al. (2022) (in preparation)" } ] }