{ "GermlineSet": [ { "germline_set_id": "OGRDB:G00061", "author": "William Lees", "lab_name": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "acknowledgements": null, "release_version": 1, "release_description": "Pre-release, for testing. Not to be used for publication.", "release_date": "2023-07-10", "germline_set_name": "IGKappa_VJ_extended", "germline_set_ref": "OGRDB:IGKappa_VJ.1", "pub_ids": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "locus": "IGK", "allele_descriptions": [ { "allele_description_id": "OGRDB:A02788", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ1*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ1*01", "sequence": "GGTTTCTGTTCAGCAAGACAATGGAGAGCTCTCACTGTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC", "coding_sequence": "GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": null, "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 77, "j_codon_frame": 1, "j_cdr3_end": 77, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "1439", "sequence": "GGTTTCTGTTCAGCAAGACAATGGAGAGCTCTCACTGTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC", "repository_name": "GenBank", "repository_ref": "AH002839", "patch_no": "2", "gff_seqid": null, "gff_start": 212, "gff_end": 288, "strand": null }, { "sequence_id": "1440", "sequence": "GGTTTTTGTTCAGCAAGACAATGGAGAGCTCTCACTGTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 479739, "gff_end": 479815, "strand": null }, { "sequence_id": "1441", "sequence": "GGTTTTTGTTCAGCAAGACAATGGAGAGCTCTCACTGTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377947, "gff_end": 1377871, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AH002839\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02789", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ2*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ2*01", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAAGAGGAACCATTGTGTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "coding_sequence": "TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": null, "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 78, "j_codon_frame": 2, "j_cdr3_end": 78, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "1442", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAAGAGGAACCATTGTGTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "AH002839", "patch_no": "2", "gff_seqid": null, "gff_start": 573, "gff_end": 650, "strand": null }, { "sequence_id": "1443", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAAGAGGAACCATTGTGTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 480099, "gff_end": 480176, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AH002839\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02790", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ2*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ2*03", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAACAGGAACCATTGTGTGTACAGTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "coding_sequence": "TGTACAGTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": null, "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 78, "j_codon_frame": 2, "j_cdr3_end": 78, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "1444", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAACAGGAACCATTGTGTGTACAGTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "AC231119", "patch_no": "2", "gff_seqid": null, "gff_start": 26524, "gff_end": 26601, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC231119\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02791", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ2*04.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ2*04", "sequence": "AGTTTTTGTATAGGAGGGAAGTTAAGAGGAACCATTGTGTGTGCAGTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "coding_sequence": "TGTGCAGTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": null, "allele_designation": "04", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 78, "j_codon_frame": 2, "j_cdr3_end": 2, "j_rs_start": 79, "j_rs_end": 41, "unrearranged_support": [], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample GRCh38:NC_000002.12\r\nVDJbase example haplotype: P1_I11", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02792", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ3*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ3*01", "sequence": "GGTTTTTGTAAAGGGAAAAGTTAAGACGAATCACTGTGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC", "coding_sequence": "ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3", "subgroup_designation": null, "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 39, "gene_end": 76, "j_codon_frame": 1, "j_cdr3_end": 76, "j_rs_start": 1, "j_rs_end": 38, "unrearranged_support": [ { "sequence_id": "1446", "sequence": "GGTTTTTGTAAAGGGAAAAGTTAAGACGAATCACTGTGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC", "repository_name": "GenBank", "repository_ref": "AH002839", "patch_no": "2", "gff_seqid": null, "gff_start": 880, "gff_end": 955, "strand": null }, { "sequence_id": "1447", "sequence": "GGTTTTTGTAAAGGGAAAAGTTAAGACGAATCACTGTGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 480405, "gff_end": 480480, "strand": null }, { "sequence_id": "1448", "sequence": "GGTTTTTGTAAAGGGAAAAGTTAAGACGAATCACTGTGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377946, "gff_end": 1377871, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AH002839\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02793", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ4*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ4*01", "sequence": "GGTTTTTGTTGAGGGGAAAGGGTGAGATCCCTCACTGTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC", "coding_sequence": "GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "4", "subgroup_designation": null, "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 77, "j_codon_frame": 1, "j_cdr3_end": 77, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "1449", "sequence": "GGTTTTTGTTGAGGGGAAAGGGTGAGATCCCTCACTGTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "AH002839", "patch_no": "2", "gff_seqid": null, "gff_start": 1221, "gff_end": 1297, "strand": null }, { "sequence_id": "1450", "sequence": "GGTTTTTGTTGAGGGGAAAGGGTGAGATCCCTCACTGTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 480739, "gff_end": 480815, "strand": null }, { "sequence_id": "1451", "sequence": "GGTTTTTGTTGAGGGGAAAGGGTGAGATCCCTCACTGTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377947, "gff_end": 1377871, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AH002839\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02794", "allele_description_ref": "OGRDB:Homo sapiens:IGKJ5*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKJ5*01", "sequence": "GATTTTTGTTAAGGGGAAAGTAATTAAGTTAACACTGTGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC", "coding_sequence": "GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "J", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "5", "subgroup_designation": null, "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 40, "gene_end": 77, "j_codon_frame": 1, "j_cdr3_end": 77, "j_rs_start": 1, "j_rs_end": 39, "unrearranged_support": [ { "sequence_id": "1452", "sequence": "GATTTTTGTTAAGGGGAAAGTAATTAAGTTAACACTGTGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC", "repository_name": "GenBank", "repository_ref": "AH002839", "patch_no": "2", "gff_seqid": null, "gff_start": 1536, "gff_end": 1612, "strand": null }, { "sequence_id": "1453", "sequence": "GATTTTTGTTAAGGGGAAAGTAATTAAGTTAACACTGTGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 481057, "gff_end": 481133, "strand": null }, { "sequence_id": "1454", "sequence": "GATTTTTGTTAAGGGGAAAGTAATTAAGTTAACACTGTGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377947, "gff_end": 1377871, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AH002839\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02795", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-12*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-12*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "12", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1455", "sequence": "GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "repository_name": "GenBank", "repository_ref": "X93623", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1456", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 100324, "gff_end": 100822, "strand": null }, { "sequence_id": "1457", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 301013, "gff_end": 301511, "strand": null }, { "sequence_id": "1458", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377692, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02796", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-13*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-13*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCACATAGTGTTACAAACCCGAACATAAACC", "coding_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "13", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 187, "gene_end": 473, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 176, "leader_2_end": 186, "v_rs_start": 474, "v_rs_end": 501, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCA", "aligned_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATT..................AGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCC.....................TCCAGTTTGGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1459", "sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCA", "repository_name": "GenBank", "repository_ref": "X93647", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1460", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCACATAGTGTTACAAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 106090, "gff_end": 106590, "strand": null }, { "sequence_id": "1461", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGATATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAATTACCCTCACATAGTGTTACAAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 295245, "gff_end": 295745, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02797", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-16*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-16*02", "sequence": "ATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "16", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATT..................AGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAAGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1462", "sequence": "ATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 159959, "gff_end": 160458, "strand": null }, { "sequence_id": "1463", "sequence": "ATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 241382, "gff_end": 241881, "strand": null }, { "sequence_id": "1464", "sequence": "ATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377693, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02798", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-17*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-17*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "17", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATT..................AGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1465", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "X72808", "patch_no": "1", "gff_seqid": null, "gff_start": 403, "gff_end": 902, "strand": null }, { "sequence_id": "1466", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 177442, "gff_end": 177941, "strand": null }, { "sequence_id": "1467", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377693, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X72808\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02799", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-17*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-17*03", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "17", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATT..................AGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCGCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1468", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 223896, "gff_end": 224395, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample NG_000834\r\nVDJbase example haplotype: P1_I74", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02800", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-27*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-27*01", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "27", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATT..................AGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAATCAGGGGTCCCA...TCTCGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1469", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "repository_name": "GenBank", "repository_ref": "X93622", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1470", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 81713, "gff_end": 82211, "strand": null }, { "sequence_id": "1471", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 127839, "gff_end": 128337, "strand": null }, { "sequence_id": "1472", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377692, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC244255\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02801", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-27*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-27*02", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "27", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATT..................AGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAATCAGGGGTCCCA...TCTCGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1473", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGGTAAGGAGGGAAACAACAAAAATTTTATTCAGCCAGTGTAGCCACTAATGCCTGGCACTTCAGGAAATTCTTCTTAGAACATTACTAATCATGTGGATATGTGTTTTTATGTTCCTAATATCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCCACTGTGATACAAGCCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "OL352710", "patch_no": "1", "gff_seqid": null, "gff_start": 6960, "gff_end": 7458, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample OL352710\r\nVDJbase example haplotype: P1_I10 (*01_T231C)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02802", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-33*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-33*01", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTAAGGAAGGATAACACTAGGAATTTTCTCAGCCAGTGTGCTCAGTACAGCCTGGCTCTTGATGGAAGCCTTCCTATAATATGACTAATAGTATGAATATTTGTGTTTATGTTTCTAATCGCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCCACAGTGTAACAAGTCATAACATAAATC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "33", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATT..................AGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCA.....................TCCAATTTGGAAACAGGGGTCCCA...TCAAGGTTCAGTGGAAGTGGA......TCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1474", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC", "repository_name": "GenBank", "repository_ref": "X93620", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1475", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTAAGGAAGGATAACACTAGGAATTTTCTCAGCCAGTGTGCTCAGTACAGCCTGGCTCTTGATGGAAGCCTTCCTATAATATGACTAATAGTATGAATATTTGTGTTTATGTTTCTAATCGCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCCACAGTGTAACAAGTCATAACATAAATC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 136291, "gff_end": 136789, "strand": null }, { "sequence_id": "1476", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTAAGGAAGGATAACACTAGGAATTTTCTCAGCCAGTGGGCTCAGTACAGCCTGGCTCTTGATGGAAGCCTTCCTATAATATGACTAATAGTATGAATATTTGTGTTTATGTTTCTAATCGCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCCACAGTGTAACAAGTCATAACATAAATC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 73156, "gff_end": 73654, "strand": null }, { "sequence_id": "1477", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTAAGGAAGGATAACACTAGGAATTTTCTCAGCCAGTGTGCTCAGTACAGCCTGGCTCTTGATGGAAGCCTTCCTATAATATGACTAATAGTATGAATATTTGTGTTTATGTTTCTAATCGCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCCACAGTGTAACAAGTCATAACATAAATC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377692, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGKV1D-33*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC244255\r\nVDJbase example haplotype: Identical to D allele", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02803", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-39*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-39*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGACTGGAACTTCAGGGAAGTTCTCTGATAACATGATTAATAGTAAGAATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCCACAGTGTTACAAGTCATAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "39", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATT..................AGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1478", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC", "repository_name": "GenBank", "repository_ref": "X93627", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1479", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGACTGGAACTTCAGGGAAGTTCTCTGATAACATGATTAATAGTAAGAATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCCACAGTGTTACAAGTCATAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 187915, "gff_end": 188413, "strand": null }, { "sequence_id": "1480", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGACTGGAACTTCAGGGAAGTTCTCTGATAACATGATTAATAGTAAGAATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCCACAGTGTTACAAGTCATAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 21534, "gff_end": 22032, "strand": null }, { "sequence_id": "1481", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGACTGGAACTTCAGGGAAGTTCTCTGATAACATGATTAATAGTAAGAATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCCACAGTGTTACAAGTCATAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377692, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGKV1D-39*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC244255\r\nVDJbase example haplotype: E", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02804", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-5*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-5*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "5", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATT..................AGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGATGCC.....................TCCAGTTTGGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1482", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "J00245", "patch_no": "1", "gff_seqid": null, "gff_start": 128, "gff_end": 627, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample J00245\r\nVDJbase example haplotype: P1_I74", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02805", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-5*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-5*03", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "5", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATT..................AGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCG.....................TCTAGTTTAGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1483", "sequence": "GTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "X72813", "patch_no": "1", "gff_seqid": null, "gff_start": 34, "gff_end": 359, "strand": null }, { "sequence_id": "1484", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 7400, "gff_end": 7899, "strand": null }, { "sequence_id": "1485", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 393915, "gff_end": 394414, "strand": null }, { "sequence_id": "1486", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377693, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02806", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-5*04.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-5*04", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "5", "allele_designation": "04", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATT..................AGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCA.....................TCTAGTTTAGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1487", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "MW316670", "patch_no": "1", "gff_seqid": null, "gff_start": 79, "gff_end": 578, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MW316670\r\nVDJbase example haplotype: P1_I65 (*03_G171A)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02807", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-5*05.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-5*05", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGCTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGCTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "5", "allele_designation": "05", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGCTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATT..................AGTAGCTGGCTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCA.....................TCTAGTTTAGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1488", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTCAGTACTGCCTGGTTATTCAGGGAAGTCTTCCTATAATATGATCAATAGTATGAATATTTGTGTTTCTATTTCCAATCTCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGCTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "MW316676", "patch_no": "1", "gff_seqid": null, "gff_start": 79, "gff_end": 578, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MW316676\r\nVDJbase example haplotype: P1_I57 (*03_T115C_G171A)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02808", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-6*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-6*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGATGGAGAACACTGGCAGTTTACTCAGCCCAGGGTGCTCAGCACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTTTTTGTGTTTCCAATCTCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCCCACAGTGTTACACACCCGAACAGAAACC", "coding_sequence": "GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "6", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 187, "gene_end": 473, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 176, "leader_2_end": 186, "v_rs_start": 474, "v_rs_end": 501, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCC", "aligned_sequence": "GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATT..................AGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCAGTTTACAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1489", "sequence": "GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCC", "repository_name": "GenBank", "repository_ref": "X93621", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1490", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGATGGAGAACACTGGCAGTTTACTCAGCCCAGGGTGCTCAGCACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTTTTTGTGTTTCCAATCTCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCCCACAGTGTTACACACCCGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 374952, "gff_end": 375452, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample NG_000834\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02809", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-8*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-8*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "coding_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "8", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "aligned_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1491", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 52509, "gff_end": 53008, "strand": null }, { "sequence_id": "1492", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 348806, "gff_end": 349305, "strand": null }, { "sequence_id": "1493", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "MW316672", "patch_no": "1", "gff_seqid": null, "gff_start": 328, "gff_end": 827, "strand": null }, { "sequence_id": "1494", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377693, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02810", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-8*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-8*02", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATAACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "coding_sequence": "GCCATCCGGATAACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "8", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCGGATAACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "aligned_sequence": "GCCATCCGGATAACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1495", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATAACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "MW316669", "patch_no": "1", "gff_seqid": null, "gff_start": 328, "gff_end": 827, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MW316669\r\nVDJbase example haplotype: P1_I65 (*01_G12A_T31C)\r\nMapped' by haplotype", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02811", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-8*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-8*03", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "coding_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "8", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "aligned_sequence": "GCCATCCGGATGACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1496", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGCTTGGTACAGCCTGGCCCTTCAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCACTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "MW316671", "patch_no": "1", "gff_seqid": null, "gff_start": 328, "gff_end": 827, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MW316671\r\nVDJbase example haplotype: P1_I74 (*01_T31C)\r\nMapped' by haplotype", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02812", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-9*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-9*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "coding_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "9", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1497", "sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "repository_name": "GenBank", "repository_ref": "X93626", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1498", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 70082, "gff_end": 70581, "strand": null }, { "sequence_id": "1499", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 331254, "gff_end": 331753, "strand": null }, { "sequence_id": "1500", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377693, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02813", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-9*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-9*02", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "coding_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "9", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1501", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTCTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCCCACAGTGTTACAAACCTGAACATAAACC", "repository_name": "GenBank", "repository_ref": "OL352717", "patch_no": "1", "gff_seqid": null, "gff_start": 35319, "gff_end": 35818, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample OL352717\r\nVDJbase example haplotype: P1_I11 (*01_C70T)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02814", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1-NL1*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1-NL1*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGTCTGCCTATTTAGGGAAGTTACCTTACTACATGATTAATTGTGTAGACATTTGTTTTTATGTTTCCAATCTCAGGTACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGCTCTATGCTGCATCCAGATTGGAAAGTGGGGTCCCATCCAGGTTCAGTGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCGAACAAAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGCTCTATGCTGCATCCAGATTGGAAAGTGGGGTCCCATCCAGGTTCAGTGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1", "subgroup_designation": "NL1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGCTCTATGCTGCATCCAGATTGGAAAGTGGGGTCCCATCCAGGTTCAGTGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATT..................AGCAATTCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGCTCTATGCTGCA.....................TCCAGATTGGAAAGTGGGGTCCCA...TCCAGGTTCAGTGGCAGTGGA......TCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1502", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGATGGAGAACACTAGGAATTTACTCAGCCAGTGTGCTCAGTACTGTCTGCCTATTTAGGGAAGTTACCTTACTACATGATTAATTGTGTAGACATTTGTTTTTATGTTTCCAATCTCAGGTACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGCTCTATGCTGCATCCAGATTGGAAAGTGGGGTCCCATCCAGGTTCAGTGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC145029", "patch_no": "2", "gff_seqid": null, "gff_start": 27414, "gff_end": 27912, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC145029\r\nVDJbase example haplotype: P1_I10", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02815", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-12*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-12*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "12", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1503", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "X17263", "patch_no": "1", "gff_seqid": null, "gff_start": 137, "gff_end": 635, "strand": null }, { "sequence_id": "1504", "sequence": "GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC", "repository_name": "GenBank", "repository_ref": "X93624", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1505", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGAAAGGAGAACACTAGGATTATACTCGGTCAGTGTGCTGAGTACTGCTTTACTATTCAGGGAACTTCTCTTACAGCATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCCACAGTGTTACCAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 88446, "gff_end": 88944, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X17263", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02816", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-13*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-13*02", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCACACAGTGTTACAAACCCGAACATAAACC", "coding_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "13", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 187, "gene_end": 473, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 176, "leader_2_end": 186, "v_rs_start": 474, "v_rs_end": 501, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCA", "aligned_sequence": "GCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATT..................AGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCC.....................TCCAGTTTGGAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1506", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCACACAGTGTTACAAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 71589, "gff_end": 72089, "strand": null }, { "sequence_id": "1507", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTTCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGCAGTTTACTCAGCCCAGGGGGCTCAGTACAGCCTGGCTATTCAGGGAAATTCTCTTACTACATGATTAATTGTGTGGACCATTTGTGTTTATGCTTCCAATCTCAGGTGCCAGATGTGCCATCCAGTTGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGCAGTGCTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCTCCTAAGCTCCTGATCTATGATGCCTCCAGTTTGGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTTTAATAGTTACCCTCACACAGTGTTACAAACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1296744, "gff_end": 1297244, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02817", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-16*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-16*01", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "16", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATT..................AGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1508", "sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "repository_name": "GenBank", "repository_ref": "X93625", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1509", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 125425, "gff_end": 125924, "strand": null }, { "sequence_id": "1510", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 148056, "gff_end": 148555, "strand": null }, { "sequence_id": "1511", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1242909, "gff_end": 1243408, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02818", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-16*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-16*02", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "16", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGTATT..................AGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1512", "sequence": "ATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTAAGGATGGAGAACACTAGCAGTTTACTCAGCCCAGGGTGCTCAGTACTGCTTTACTATTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCCCACAGTGTTACACACCCAAACATAAACC", "repository_name": "GenBank", "repository_ref": "V00558", "patch_no": "1", "gff_seqid": null, "gff_start": 137, "gff_end": 636, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample V00558\r\nVDJbase example haplotype: P1_I11 (4 seq)\r\nMapped' by expression level", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02819", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-17*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-17*01", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAACAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTAACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "coding_sequence": "AACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "17", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "AACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "aligned_sequence": "AACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATT..................AGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1513", "sequence": "AACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC", "repository_name": "GenBank", "repository_ref": "Z27498", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1514", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAACAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTAACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 142872, "gff_end": 143371, "strand": null }, { "sequence_id": "1515", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAACAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTAACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 165503, "gff_end": 166002, "strand": null }, { "sequence_id": "1516", "sequence": "ATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGATGGAGAACACTAACAGTTTACTCAGCCCAGAGTGCTCAGTACTGCTTTACTGTTCAGGGAAATTCTCTTACAACATGATTAATTGTGTGGACATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTAACATCCAGATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGGCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGTCCCTAAGCACCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCCACAGTGTTACACACCCGAACATAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1225462, "gff_end": 1225961, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I74 (2 seq)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02822", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-42*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-42*01", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "coding_sequence": "GACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "42", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 177, "gene_end": 463, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 166, "leader_2_end": 176, "v_rs_start": 464, "v_rs_end": 491, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATT..................AGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCA.....................AAAGATTTGCACCCTGGGGTCTCA...TCGAGGTTCAGTGGCAGGGGA......TCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1525", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "repository_name": "GenBank", "repository_ref": "X72816", "patch_no": "1", "gff_seqid": null, "gff_start": 215, "gff_end": 705, "strand": null }, { "sequence_id": "1526", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGATCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 58105, "gff_end": 58595, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X72816", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02823", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-42*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-42*02", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "coding_sequence": "GACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "42", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 177, "gene_end": 463, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 166, "leader_2_end": 176, "v_rs_start": 464, "v_rs_end": 491, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "aligned_sequence": "GACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATT..................AGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCA.....................AAAGATTTGCACCCTGGGGTCTCA...TCGAGGTTCAGTGGCAGGGGA......TCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1527", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 35484, "gff_end": 35974, "strand": null }, { "sequence_id": "1528", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTTCTTAGCCCACTGTGCTCTGGCACTTCTGGGAAGTTCTCTTATACCATGATTCATGGTGTGGATATTTGTTTTTATGTTTCCAATCTCAGGTGTCAGATTTGACATCCAGATGACCCAGTCTCCATCTTTCCTGTCTGCATCTGTAGGAGACAGAGTCAGTATCATTTGCTGGGCAAGTGAGGGCATTAGCAGTAATTTAGCCTGGTATCTGCAGAAACCAGGGAAATCCCCTAAGCTCTTCCTCTATGATGCAAAAGATTTGCACCCTGGGGTCTCATCGAGGTTCAGTGGCAGGGGATCTGGGACGGATTTCACTCTCACCATCATCAGCCTGAAGCCTGAAGATTTTGCAGCTTATTACTGTAAACAGGACTTCAGTTACCCTCCCACAGGGTTACAAGCCTGAACATAAGCC", "repository_name": "GenBank", "repository_ref": "KM455560", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 491, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02824", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-43*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-43*01", "sequence": "ATGAGGGTGCCCGCTCAGCGCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGAAGGAGAACCCTAGCAGTTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCAAACAAAAACC", "coding_sequence": "GCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "43", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 186, "gene_end": 472, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 175, "leader_2_end": 185, "v_rs_start": 473, "v_rs_end": 500, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "aligned_sequence": "GCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCA.....................TCCAGTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGCGGCAGTGGA......TCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1529", "sequence": "ATGAGGGTGCCCGCTCAGCGCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGAAGGAGAACCCTAGCAGTTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "X72817", "patch_no": "1", "gff_seqid": null, "gff_start": 156, "gff_end": 655, "strand": null }, { "sequence_id": "1530", "sequence": "ATGAGGGTGCCCGCTCAGCGCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGAAGGAGAACCCTAGCAGTTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 15634, "gff_end": 16133, "strand": null }, { "sequence_id": "1531", "sequence": "ATGAGGGTGCCCGCTCAGCGCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTAAGGAAGGAGAACCCTAGCAGTTTACTCAGCCCAGTGTGTTCCGTACAGCCTGGCTCTTGAGGGAAGTTCTCTTACAACATGATTAATTGTATGGACATTTGTGTTTATATTTCCAATCTCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATTCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCTGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGCAAAAGCCCCTAAGCTCTTCATCTATTATGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACGGATTACACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTACCCCTCCCACAGTGTTACACACCCAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 38241, "gff_end": 38740, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X72817\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02825", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-8*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-8*01", "sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "coding_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "8", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 287, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "aligned_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1532", "sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "repository_name": "GenBank", "repository_ref": "X93628", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X93628\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02826", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-8*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-8*02", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCAATGTGCTCAGTACAGCCTGGCCCTTCAGGGAAATTCTCTTACTACATGATTAATTGTATGGATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCCCACAGTGTTACACACCCGAACAAAAACC", "coding_sequence": "GCCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "8", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 185, "gene_end": 471, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 174, "leader_2_end": 184, "v_rs_start": 472, "v_rs_end": 499, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GCCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "aligned_sequence": "GCCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1533", "sequence": "ATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTAAGGAAGGAGAACACTAGGAATTTACTCAGCCAATGTGCTCAGTACAGCCTGGCCCTTCAGGGAAATTCTCTTACTACATGATTAATTGTATGGATATTTGTTTTTATGTTTCCAATCTCAGGTGCCAGATGTGCCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCCCACAGTGTTACACACCCGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 4781, "gff_end": 5279, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I74", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A00052", "allele_description_ref": "OGRDB:Homo sapiens:IGKV1D-8*04.2_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 2, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV1D-8*04", "sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCATCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "coding_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCATCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "ext_3prime": "TCC", "aliases": [ "IGKV1D-8*i01" ], "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": "Rearranged only", "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "1D", "subgroup_designation": "8", "allele_designation": "04", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 284, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCATCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "aligned_sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCATCATCAGTTGTCGGATGAGTCAGGGCATT..................AGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCA.....................TCCACTTTGCAAAGTGGGGTCCCA...TCAAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1534", "sequence": "GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCATCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC", "repository_name": "GenBank", "repository_ref": "MK308861", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 284, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "This inference was considered at IARC Meeting 49 on February 4th 2020, at which it was noted:\r\n\r\nThe sequence was seen in 0.3% of all unmutated rearrangements, with 747 sequences including 538 perfect matches to the inferred allele. There was abundant variation in the CDR3 regions of the aligned sequences, though relatively large numbers of sequences were clonally related (42 \u201cUnique CDR3s with unmutated\u201d). The IGKV1D-8*01 allele was also present in the genotype, at a similar frequency (0.4% of all unmutated sequences; 976 sequences; 758 unmutated sequences). It was noted that the select set available in SRA/ENA is very limited in size (essentially only representing 2 different rearrangements, either involving IGKJ1 or IGKJ2) as only full-length sequences (covering all bases of the V gene up to and including base 335) had been included in the submitted set. IGKV1-8*01 was also present at high frequency (7743 sequences), but this sequence has 12 nucleotide differences to the inference under consideration. Haplotype data is unavailable. Plots of the final 3\u2019 nucleotides showed a high level of variability, making it impossible to determine the final three nucleotides with certainty. The sequence, up to and including nucleotide 332, was affirmed as a Level 1 sequence. Uncertainty regarding nucleotides 333-335 will be indicated in IARC and OGRDB publications by three dots at the end of the affirmed sequence.\r\n\r\nAdditional information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MK308861", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02827", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-18*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-18*01", "sequence": "ATAAGGGTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTTTGGGTTCCTGGTAAGGACAGAAGGGAGATAAGGGAGGAGAATGGAGTGTGAGGGTGAGCTCTGGGGGTCCCACTGCCTGTCCACATGCACATCTTGACCTGCAAGAAAAGGTGTATAAAGTTTAGAACTGCAAGAGTCAGAAAGAGAAGATTCCTCACTCTTATAGTTCTAAACTTCATATCCTAGAAGGACAAAGGACTTGTGCTCTCATGAAGAGTGTCACACAGGAAGAGGATAATAGTGTAGGCGACTTCTTGAGTCTCTTTTGTGCCTTGTGAATGTTGGTTCTTTTTATGCCTGGATGTTTAGGGGTATGAACCAAAGTCACACAAAAAAATCACTTAGCATAAAGTAGATAACAGAAAGAATATCATTTCAATGGTTCCCAATATTTGTACATAACTTTGCACTTCTCTCACTATTTCAGGATCCAGTGGAGATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTTTCCAATCATCTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAACACAGTGGTACAACCCTGAACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTTTCCAATCATCTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "18", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 478, "gene_end": 779, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 467, "leader_2_end": 477, "v_rs_start": 780, "v_rs_end": 807, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTTTCCAATCATCTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGT...AATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTT.....................TCCAATCATCTTTCTGGGGTCCCA...GACAGGTTTAGTGGCAGTGGG......TCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1535", "sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTTTCCAATCATCTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "repository_name": "GenBank", "repository_ref": "X93643", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1536", "sequence": "ATAAGGGTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTTTGGGTTCCTGGTAAGGACAGAAGGGAGATAAGGGAGGAGAATGGAGTGTGAGGGTGAGCTCTGGGGGTCCCACTGCCTGTCCACATGCACATCTTGACCTGCAAGAAAAGGTGTATAAAGTTTAGAACTGCAAGAGTCAGAAAGAGAAGATTCCTCACTCTTATAGTTCTAAACTTCATATCCTAGAAGGACAAAGGACTTGTGCTCTCATGAAGAGTGTCACACAGGAAGAGGATAATAGTGTAGGCGACTTCTTGAGTCTCTTTTGTGCCTTGTGAATGTTGGTTCTTTTTATGCCTGGATGTTTAGGGGTATGAACCAAAGTCACACAAAAAAATCACTTAGCATAAAGTAGATAACAGAAAGAATATCATTTCAATGGTTCCCAATATTTGTACATAACTTTGCACTTCTCTCACTATTTCAGGATCCAGTGGAGATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCTTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTATAGGGTTTCCAATCATCTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGTAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAACACAGTGGTACAACCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 188806, "gff_end": 189612, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24 (3 seq)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02828", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-24*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-24*01", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "24", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 504, "gene_end": 805, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 493, "leader_2_end": 503, "v_rs_start": 806, "v_rs_end": 833, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCA", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGT...GATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATT.....................TCTAACCGGTTCTCTGGGGTCCCA...GACAGATTCAGTGGCAGTGGG......GCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1537", "sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCA", "repository_name": "GenBank", "repository_ref": "X93633", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1538", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 236428, "gff_end": 237260, "strand": null }, { "sequence_id": "1539", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 164595, "gff_end": 165427, "strand": null }, { "sequence_id": "1540", "sequence": "ATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCATGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377932, "gff_end": 1377179, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02829", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-24*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-24*02", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "24", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 504, "gene_end": 805, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 493, "leader_2_end": 503, "v_rs_start": 806, "v_rs_end": 833, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGT...GATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATT.....................TCTAACCGGTTCTCTGGGGTCCCA...GACAGATTCAGTGGCAGTGGG......GCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1541", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCACCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGATTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCTCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "OL352729", "patch_no": "1", "gff_seqid": null, "gff_start": 22148, "gff_end": 22980, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample OL352729\r\nVDJbase example haplotype: P1_I65 (*01_T314C)\r\nMapped' by expression level", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02830", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-28*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-28*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGTAAGAAAAGAAGGAGATGAGGAAGGAGAATAGGGTGGGAGGGTGAGCTCTAGGGCTCCACAGCATCCCATGATCCCATGTTTAGTCTAACCCTGTGTTAGAGGAGTATAATCTGTGCTGTAGAAAAGGGAACTTGATATTTTGCTCTGTGAATAATTAGAAGCCTCATAAGAAATATGACGTCTGGTGCTCCGATTAAGATTTTCAAAATATAAAGGTCTCTTATACTTTACAAAAATTGAATTCATTTTAGAATGTGTATTTTTATGGCATAAATCAGTATTTTTTAAAATTAAGTTTAAATAAATGACATAAGATAAATTATGAAAATTGCTCATTAGGTTTGTACATAACTTTGCAATTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCACAGTGGTACAACCCCTAACAGAAACC", "coding_sequence": "GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "28", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 435, "gene_end": 736, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 424, "leader_2_end": 434, "v_rs_start": 737, "v_rs_end": 764, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC", "aligned_sequence": "GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGT...AATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGT.....................TCTAATCGGGCCTCCGGGGTCCCT...GACAGGTTCAGTGGCAGTGGA......TCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1542", "sequence": "GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC", "repository_name": "GenBank", "repository_ref": "X93632", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1543", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGTAAGAAAAGAAGGAGATGAGGAAGGAGAATAGGGTGGGAGGGTGAGCTCTAGGGCTCCACAGCATCCCATGATCCCATGTTTAGTCTAACCCTGTGTTAGAGGAGTATAATCTGTGCTGTAGAAAAGGGAACTTGATATTTTGCTCTGTGAATAATTAGAAGCCTCATAAGAAATATGACGTCTGGTGCTCCGATTAAGATTTTCAAAATATAAAGGTCTCTTATACTTTACAAAAATTGAATTCATTTTAGAATGTGTATTTTTATGGCATAAATCAGTATTTTTTAAAATTAAGTTTAAATAAATGACATAAGATAAATTATGAAAATTGCTCATTAGGTTTGTACATAACTTTGCAATTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCACAGTGGTACAACCCCTAACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 122442, "gff_end": 123205, "strand": null }, { "sequence_id": "1544", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGTAAGAAAAGAAGGAGATGAGGAAGGAGAATAGGGTGGGAGGGTGAGCTCTAGGGCTCCACAGCATCCCATGATCCCATGTTTAGTCTTACCCTGTGTTAGAGGAGTATAATCTGTGCTGTAGAAAAGGGAACTTGATATTTTGCTCTGTGAATAATTAGAAGCCTCATAAGAAATATGACGTCTGGTGCTCTGATTAAGATCTTCAAAATATAAAGGTCTCTTATACTTTACAAAAATTGAATTCATTTTAGAATGTGTATTTTTATGGCATAAATCACTATTTTTTAAAATTAAGTTTAAATAAATGACATAAGATAAATTATGAAAATTGCTCATTAGGTTTGTACATAACTTTGCAATTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCACAGTGGTACAACCCCTAACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 119295, "gff_end": 120058, "strand": null }, { "sequence_id": "1545", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGTAAGAAAAGAAGGAGATGAGGAAGGAGAATAGGGTGGGAGGGTGAGCTCTAGGGCTCCACAGCATCCCATGATCCCATGTTTAGTCTTACCCTGTGTTAGAGGAGTATAATCTGTGCTGTAGAAAAGGGAACTTGATATTTTGCTCTGTGAATAATTAGAAGCCTCATAAGAAATATGACGTCTGGTGCTCTGATTAAGATCTTCAAAATATAAAGGTCTCTTATACTTTACAAAAATTGAATTCATTTTAGAATGTGTATTTTTATGGCATAAATCACTATTTTTTAAAATTAAGTTTAAATAAATGACATAAGATAAATTATGAAAATTGCTCATTAGGTTTGTACATAACTTTGCAATTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCACAGTGGTACAACCCCTAACAGAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377942, "gff_end": 1377179, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGKV2D-28*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02831", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-29*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-29*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATCCCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAGGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGCCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAATTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATATCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCGGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": false, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "29", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 428, "gene_end": 729, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 417, "leader_2_end": 427, "v_rs_start": 730, "v_rs_end": 757, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCC", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGT...GATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTT.....................TCCAGCCGGTTCTCTGGAGTGCCA...GATAGGTTCAGTGGCAGCGGG......TCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1546", "sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCC", "repository_name": "GenBank", "repository_ref": "X93644", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1547", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATCCCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAGGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGCCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAATTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATATCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCGGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 102475, "gff_end": 103231, "strand": null }, { "sequence_id": "1548", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATCCCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAGGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGCCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAATTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATATCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCGGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGAATGCAAGGTATACACCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 106814, "gff_end": 107570, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC244255", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02832", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-29*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-29*02", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATCCCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAGGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGCCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAATTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATATCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCGGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTATACACCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTATACACCTTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "29", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 428, "gene_end": 729, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 417, "leader_2_end": 427, "v_rs_start": 730, "v_rs_end": 757, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTATACACCTTCCTCC", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGT...GATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATCTATGAAGTT.....................TCCAGCCGGTTCTCTGGAGTGCCA...GATAGGTTCAGTGGCAGCGGG......TCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTATACACCTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1549", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATCCCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAGGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGCCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAATTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATATCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCGGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTAATCTATGAAGTTTCCAGCCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTATACACCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "OL352710", "patch_no": "1", "gff_seqid": null, "gff_start": 27743, "gff_end": 28499, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample OL352710\r\nVDJbase example haplotype: P1_I10\r\nMapped' (see Comment)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02833", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-30*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-30*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAGTGGGGCATGTGATGATCAGATCTGTGAGAGTGAGGAAGATTCAAGCAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTGTATTTTTGAAATATGAACAAATACATATATAGCCTGAAATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "coding_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "30", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 487, "gene_end": 788, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 476, "leader_2_end": 486, "v_rs_start": 789, "v_rs_end": 816, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "aligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGT...GATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTT.....................TCTAACCGGGACTCTGGGGTCCCA...GACAGATTCAGCGGCAGTGGG......TCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1550", "sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "repository_name": "GenBank", "repository_ref": "X93635", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1551", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAGTGGGGCATGTGATGATCAGATCTGTGAGAGTGAGGAAGATTCAAGCAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTGTATTTTTGAAATATGAACAAATACATATATAGCCTGAAATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 113071, "gff_end": 113886, "strand": null }, { "sequence_id": "1552", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAGTGGGGCATGTGATGATCAGATCTGTGAGAGTGAGGAAGATTCAAGCAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTGTATTTTTGAAATATGAACAAATACATATATAGCCTGAAATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 96159, "gff_end": 96974, "strand": null }, { "sequence_id": "1553", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAGTGGGGCATGTGATGATCAGATCTGTGAGAGTGAGGAAGATTCAAGCAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTGTATTTTTGAAATATGAACAAATACATATATAGCCTGAAATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377994, "gff_end": 1377179, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC244255\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02834", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-30*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-30*02", "sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "coding_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "30", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 1, "gene_end": 302, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": null, "leader_2_end": null, "v_rs_start": null, "v_rs_end": null, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "aligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGT...GATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTT.....................TCTAACCGGGACTCTGGGGTCCCA...GACAGATTCAGCGGCAGTGGG......TCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1554", "sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "repository_name": "GenBank", "repository_ref": "FM164408", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample FM164408\r\nVDJbase example haplotype: P1_I10\r\nMapped' (see Comment)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02835", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2-40*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2-40*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCTGGTAAGGACAGAAAGAGATGAGGGAGGACAACTGGGTGGGAGGTGAGCTCTGTGGGCTCCACAGCTTCACATGTTTATTCCAATAATGTGATAGAGGCACATGGTCTATGCTCCAGGGAATGGAATTCAGGTTTGTCTTATGAATAATCAGGATTCACCTCCAGGGAACGATGACCAGTGCTCTGATTAAGAACTTGAAAAAAAAGAGTTCCCTTGTGGCTAATAAATAATGGGTCTATTTTAGAAAGTCTACTTTTCATGATATAAATCAAAACTTTAAAAATGTAACTGTAAATTTATATCACAAGAGAAATTATGAAAGTTGCTCATAATGTATCTATATAAACTTGCACTTCTCTGTTATTATTTCAGGATCCAGTGAGGATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTCCACAGTGGTACAGCCCTGAACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2", "subgroup_designation": "40", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 432, "gene_end": 736, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 421, "leader_2_end": 431, "v_rs_start": 737, "v_rs_end": 764, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTC", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTT.....................TCCTATCGGGCCTCTGGAGTCCCA...GACAGGTTCAGTGGCAGTGGG......TCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1555", "sequence": "GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTC", "repository_name": "GenBank", "repository_ref": "X93631", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 305, "strand": null }, { "sequence_id": "1556", "sequence": "ACGATGACCAGTGCTCTGATTAAGAACTTGAAAAAAAAGAGTTCCCTTGTGGCTAATAAATAATGGGTCTATTTTAGAAAGTCTACTTTTCATGATATAAATCAAAACTTTAAAAATGTAACTGTAAATTTATATCACAAGAGAAATTATGAAAGTTGCTCATAATGTATCTATATAAACTTGCACTTCTCTGTTATTATTTCAGGATCCAGTGAGGATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTCCACAGTGGTACAGCCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC244255", "patch_no": "3", "gff_seqid": null, "gff_start": 198406, "gff_end": 198954, "strand": null }, { "sequence_id": "1557", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCTGGTAAGGACAGAAAGAGATGAGGGAGGACAACTGGGTGGGAGGTGAGCTCTGTGGGCTCCACAGCTTCACATGTTTATTCCAATAATGTGATAGAGGCACATGGTCTATGCTCCAGGGAATGGAATTCAGGTTTGTCTTATGAATAATCAGGATTCACCTCCAGGGAACGATGACCAGTGCTCTGATTAAGAACTTGAAAAAAAAGAGTTCCCTTGTGGCTAATAAATAATGGGTCTATTTTAGAAAGTCTACTTTTCATGATATAAATCAAAACTTTAAAAATGTAACTGTAAATTTATATCACAAGAGAAATTATGAAAGTTGCTCATAATGTATCTATATAAACTTGCACTTCTCTGTTATTATTTCAGGATCCAGTGAGGATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTCCACAGTGGTACAGCCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 10779, "gff_end": 11542, "strand": null }, { "sequence_id": "1558", "sequence": "NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTCAGGTTTGTCTTATGAATAATCAGGATTCACCTCCAGGGAACGATGACCAGTGCTCTGATTAAGAACTTGAAAAAAAAGAGTTCCCTTGTGGCTAATAAATAATGGGTCTATTTTAGAAAGTCTACTTTTCATGATATAAATCAAAACTTTAAAAATGTAACTGTAAATTTATATCACAAGAGAAATTATGAAAGTTGCTCATAATGTATCTATATAAACTTGCACTTCTCTGTTATTATTTCAGGATCCAGTGAGGATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCTTCCACAGTGGTACAGCCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1378008, "gff_end": 1377176, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGKV2D-40*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample NG_000834", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02836", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-18*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-18*01", "sequence": "ATAAGGTTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTTTGGGTTCCTGGTAAGGACAGAAGGGAGATAAGGGAGGAGAATGGAGTGTGAGGGTGAGCTCTGGGGGCCCCACTGCCTGTCCACATGCACATCTTGACCTGCAAGAAAAGGTGTATAAAGTTTAGAACTGCAAGAGTCAGAAAGAGAAGATTCCTCACTCTTATAGTTCTAAACTTCATATCCTAGAAGGACAAAGGACTTGTGCTCTCATGAAGAGTGTCACACAGGAAGAGGATAATAGTGTAGGTGACTTCTTGAGTCTCTTTTGTGCCTTGTGAATGTTGGTTCTTTTTATGCCTGGATGTTTAGGGGTATGAACCAAAGTCACACAAAAAAATCACTTAGCATAAAGTAGATAACAGAAAGAATATCATTTCAATGGTTCCCAATATTTGTACATAACCTTGCACTTCTCTCACTACTTCAGGATCCAGTGGAGATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTTTCCAGTCGTTTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAACACAGTGGTACAACCCTGAACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTTTCCAGTCGTTTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "18", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 478, "gene_end": 779, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 467, "leader_2_end": 477, "v_rs_start": 780, "v_rs_end": 807, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTTTCCAGTCGTTTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGT...AATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTT.....................TCCAGTCGTTTTTCTGGGGTCCCA...GACAGGTTTAGTGGCAGTGGG......TCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1559", "sequence": "ATAAGGTTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTTTGGGTTCCTGGTAAGGACAGAAGGGAGATAAGGGAGGAGAATGGAGTGTGAGGGTGAGCTCTGGGGGCCCCACTGCCTGTCCACATGCACATCTTGACCTGCAAGAAAAGGTGTATAAAGTTTAGAACTGCAAGAGTCAGAAAGAGAAGATTCCTCACTCTTATAGTTCTAAACTTCATATCCTAGAAGGACAAAGGACTTGTGCTCTCATGAAGAGTGTCACACAGGAAGAGGATAATAGTGTAGGTGACTTCTTGAGTCTCTTTTGTGCCTTGTGAATGTTGGTTCTTTTTATGCCTGGATGTTTAGGGGTATGAACCAAAGTCACACAAAAAAATCACTTAGCATAAAGTAGATAACAGAAAGAATATCATTTCAATGGTTCCCAATATTTGTACATAACCTTGCACTTCTCTCACTACTTCAGGATCCAGTGGAGATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTTTCCAGTCGTTTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAACACAGTGGTACAACCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 29832, "gff_end": 30638, "strand": null }, { "sequence_id": "1560", "sequence": "ATAAGGTTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTTTGGGTTCCTGGTAAGGACAGAAGGGAGATAAGGGAGGAGAATGGAGTGTGAGGGTGAGCTCTGGGGGCCCCACTGCCTGTCCACATGCACATCTTGACCTGCAAGAAAAGGTGTATAAAGTTTAGAACTGCAAGAGTCAGAAAGAGAAGATTCCTCACTCTTATAGTTCTAAACTTCATATCCTAGAAGGACAAAGGACTTGTGCTCTCATGAAGAGTGTCACACAGGAAGAGGATAATAGTGTAGGTGACTTCTTGAGTCTCTTTTGTGCCTTGTGAATGTTGGTTCTTTTTATGCCTGGATGTTTAGGGGTATGAACCAAAGTCACACAAAAAAATCACTTAGCATAAAGTAGATAACAGAAAGAATATCATTTCAATGGTTCCCAATATTTGTACATAACCTTGCACTTCTCTCACTACTTCAGGATCCAGTGGAGATATTGTGATGACCCAGACTCCACCCTCCCTGCCCGTCAACCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCCTGCATAGTAATGGATATACCTATTTGCATTGGTACCCGCAGAAGCCAGGGCAATCTCCACAGCTCCTGATTTATAGGGTTTCCAGTCGTTTTTCTGGGGTCCCAGACAGGTTTAGTGGCAGTGGGTCAGGCAGTGATTTCACACTGAAAATCAGCTGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTACACAGTTTCCTAACACAGTGGTACAACCCTGAACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 195432, "gff_end": 196238, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I31 (1 seq)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02837", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-24*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-24*01", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCCCTGAACAAAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "24", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 504, "gene_end": 805, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 493, "leader_2_end": 503, "v_rs_start": 806, "v_rs_end": 833, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGT...GATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTT.....................TCTAACCGGTTCTCTGGGGTCCCA...GACAGATTCAGTGGCAGTGGG......GCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1561", "sequence": "GATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCA", "repository_name": "GenBank", "repository_ref": "X93634", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1562", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 77561, "gff_end": 78393, "strand": null }, { "sequence_id": "1563", "sequence": "ATGAGGCTCCTTGCTCAGCTTCTGGGGCTGCTAATGCTCTGGGTCCCTGGTGAGGACAGAAGAGAGATGAGGGAGGAGAATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 243197, "gff_end": 244029, "strand": null }, { "sequence_id": "1564", "sequence": "ATGGGGTGGGAGGGTGAACTCTGGGGGCCCCATTGCCTCCCATGTGTGTTCTGTCCTCATGTTAGATGTGTACGTCTTGTACTCCAGGATGGGGCTTGTAACTTTTATATCTGCGTGAGTAAGGCATGTGAGGTTTAGATCTGTAAGAATGAGGAAGATTCCAGAAGGAACAAAGACCAGTGCTCCGGTGAAGACTCTAACAGAGAAAGAGGGAATGGTAGAGGAAACTTCTAGCACTCAAAGCACTCTGCTGTGCTTTGAAAATATGTTTTTATTTTGAAATTATATATTACTAGGGTCTGAATCAAATTATAAAAATTGATTTAGCCTGAAATAAATAACAGAAGAAAAATTATTTTAAAATTGTGCTTAAAGTTTCTACATAACCTTGCACTTCTCTCTCATTATTTCAGGATCCAGTGGGGATATTGTGATGACCCAGACTCCACTCTCCTCGCCTGTCACCCTTGGACAGCCGGCCTCCATCTCCTTCAGGTCTAGTCAAAGCCTCGTACACAGTGATGGAAACACCTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCTCCAAGACTCCTAATTTATAAGGTTTCTAACCGGTTCTCTGGGGTCCCAGACAGATTCAGTGGCAGTGGGGCAGGGACAGATTTCACACTGAAAATCAGCAGGGTGGAAGCTGAGGATGTCGGGGTTTATTACTGCACGCAAGCTACACAATTTCCTCACACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1147546, "gff_end": 1148299, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I74 (5 seq)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02838", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-26*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-26*03", "sequence": "ATGAGGCTCCCTGCTCAGCTCTTGGGGCTGCTAATGCTCTGGGTCCCTGGTAAGGACAGAAGGAGATGAGGGAGGAGAATGGGGTGGGAAGGTAAGCCTGGGGACCCCACTGCCTTCCATGTGTGTTCTGCCCTGCCCATGTGTTAGATGTACAGGTCTTGTTCTCCAGGATGGGGAATGTGAGGTTTAAATCTGTGAGAGTGAGGACGATTCAAAAAGAAGCAAGGACCTGTGTGCTCTGGTGAATATCGTCACACAGAGAAAGGGAGGTGGTGTAGGTGACTTCTAGAATCCCCTTTGCAGCTTGCAAATTTGGAATATGTTTAGTGTATAAATACAAACAACAAAAAATTATATAGCCTGAAATAAAAAATGAAAATTTATGATAAATGACACATGATATTTGTACATATCCTTCCACTTCTTTCTATCTATTTTAGGATCCAGTGCAGAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTGATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCCCACAGTGCTACAGCCCTGAGCACAAACC", "coding_sequence": "GAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTGATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "26", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 452, "gene_end": 753, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 441, "leader_2_end": 451, "v_rs_start": 754, "v_rs_end": 781, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTGATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCC", "aligned_sequence": "GAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGT...GATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTT.....................TCCAACCGGTTCTCTGGAGTGCCA...GATAGGTTCAGTGGCAGCGGG......TCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1565", "sequence": "ATGAGGCTCCCTGCTCAGCTCTTGGGGCTGCTAATGCTCTGGGTCCCTGGTAAGGACAGAAGGAGATGAGGGAGGAGAATGGGGTGGGAAGGTAAGCCTGGGGACCCCACTGCCTTCCATGTGTGTTCTGCCCTGCCCATGTGTTAGATGTACAGGTCTTGTTCTCCAGGATGGGGAATGTGAGGTTTAAATCTGTGAGAGTGAGGACGATTCAAAAAGAAGCAAGGACCTGTGTGCTCTGGTGAATATCGTCACACAGAGAAAGGGAGGTGGTGTAGGTGACTTCTAGAATCCCCTTTGCAGCTTGCAAATTTGGAATATGTTTAGTGTATAAATACAAACAACAAAAAATTATATAGCCTGAAATAAAAAATGAAAATTTATGATAAATGACACATGATATTTGTACATATCCTTCCACTTCTTTCTATCTATTTTAGGATCCAGTGCAGAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTGATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCCCACAGTGCTACAGCCCTGAGCACAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 96488, "gff_end": 97268, "strand": null }, { "sequence_id": "1566", "sequence": "ATGAGGCTCCCTGCTCAGCTCTTGGGGCTGCTAATGCTCTGGGTCCCTGGTAAGGACAGAAGGAGATGAGGGAGGAGAATGGGGTGGGAAGGTAAGCCTGGGGACCCCACTGCCTTCCATGTGTGTTCTGCCCTGCCCATGTGTTAGATGTACAGGTCTTGTTCTCCAGGATGGGGAATGTGAGGTTTAAATCTGTGAGAGTGAGGACGATTCAAAAAGAAGCAAGGACCTGTGTGCTCTGGTGAATATCGTCACACAGAGAAAGGGAGGTGGTGTAGGTGACTTCTAGAATCCCCTTTGCAGCTTGCAAATTTGGAATATGTTTAGTGTATAAATACAAACAACAAAAAATTATATAGCCTGAAATAAAAAATGAAAATTTATGATAAATGACACATGATATTTGTACATATCCTTCCACTTCTTTCTATCTATTTTAGGATCCAGTGCAGAGATTGTGATGACCCAGACTCCACTCTCCTTGTCTATCACCCCTGGAGAGCAGGCCTCCATGTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTGATGGATACACCTATTTGTATTGGTTTCTGCAGAAAGCCAGGCCAGTCTCCACGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATTTTGGAGTTTATTACTGCATGCAAGATGCACAAGATCCTCCCACAGTGCTACAGCCCTGAGCACAAACC", "repository_name": "GenBank", "repository_ref": "AC233264", "patch_no": "2", "gff_seqid": null, "gff_start": 16316, "gff_end": 17096, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I24 (5 seq)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02840", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-29*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-29*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "29", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 429, "gene_end": 730, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 418, "leader_2_end": 428, "v_rs_start": 731, "v_rs_end": 758, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGT...GATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTT.....................TCCAACCGGTTCTCTGGAGTGCCA...GATAGGTTCAGTGGCAGCGGG......TCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1572", "sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "repository_name": "GenBank", "repository_ref": "X93630", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1573", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 134921, "gff_end": 135678, "strand": null }, { "sequence_id": "1574", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 300557, "gff_end": 301314, "strand": null }, { "sequence_id": "1575", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1090182, "gff_end": 1090939, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02841", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-29*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-29*02", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "coding_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "29", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 429, "gene_end": 730, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 418, "leader_2_end": 428, "v_rs_start": 731, "v_rs_end": 758, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "aligned_sequence": "GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGT...GATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTT.....................TCCAACCGGTTCTCTGGAGTGCCA...GATAGGTTCAGTGGCAGCGGG......TCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1576", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGTAAGGATGGAAGGAGATGAGGGAGGAGGAGGGGGTGGGAAGCTGAGCTCTGGCGGCCCCACTGATTCCCGTGTTTATTCTAACCATGTGTTAAAGGAATATGGCCTATGCTCCAGGGAGAGGAATTCATATTTTGCCCTGATGATGATTTGAAAACTCCTAAAAGCAGTGCTCTGAATAATATCTTGAGAAATGAAAGAACTCTTGTGCCTATTTAATAAAGGGTTCATTTAAAGAGTTTGTTTTTATGATATGAATACAAATTTGTAAAAATAAAAGATTAGCCATAAATCAATACCATAAGGCAAATCTCAAAAGTTGTTCATTATGCTTTCACATAACCTTGCACTTCTCTCTCATAATTTCAGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCTCCCACAGTGGTACAGACCAATACAGAAACC", "repository_name": "GenBank", "repository_ref": "U41644", "patch_no": "1", "gff_seqid": null, "gff_start": 157, "gff_end": 914, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample U41644\r\nVDJbase example haplotype: P1_I45 (6 seq)\r\nMapped' (see Comment)", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02842", "allele_description_ref": "OGRDB:Homo sapiens:IGKV2D-30*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV2D-30*01", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAATGGGGCATGTGATGATCAGATCTGTGAGAGTCAGGAAGATTCAAGAAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTATATTTTTGAAATATGAACAAATACATATATAGCCTGAGATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "coding_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "2D", "subgroup_designation": "30", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 487, "gene_end": 788, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 476, "leader_2_end": 486, "v_rs_start": 789, "v_rs_end": 816, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "aligned_sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGT...GATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTT.....................TCTAACTGGGACTCTGGGGTCCCA...GACAGATTCAGCGGCAGTGGG......TCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 111, "fwr2_start": 112, "fwr2_end": 162, "cdr2_start": 163, "cdr2_end": 171, "fwr3_start": 172, "fwr3_end": 279, "cdr3_start": 280, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1577", "sequence": "GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC", "repository_name": "GenBank", "repository_ref": "X93636", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 302, "strand": null }, { "sequence_id": "1578", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAATGGGGCATGTGATGATCAGATCTGTGAGAGTCAGGAAGATTCAAGAAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTATATTTTTGAAATATGAACAAATACATATATAGCCTGAGATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 145511, "gff_end": 146326, "strand": null }, { "sequence_id": "1579", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAATGGGGCATGTGATGATCAGATCTGTGAGAGTCAGGAAGATTCAAGAAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTATATTTTTGAAATATGAACAAATACATATATAGCCTGAGATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 311147, "gff_end": 311962, "strand": null }, { "sequence_id": "1580", "sequence": "ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGTAAGGGTAGAAGGGAGATGAGGGAGGAGAATGGCATGGAACGGTGAGTTCTGGGGCCCCACTGCCTCTAACAACAGTGATCTCTGGGGGTCTCACTACACTCCTATGTGTGTTCCTTTCCTGTATTGGACATGCACATGTTGTCCTCCAGAATGGGGCATGTGATGATCAGATCTGTGAGAGTCAGGAAGATTCAAGAAGAAACAAGGATCTGTGCTCTGGGGAAGACTGACACAGAAAGGGGATGGTGTGGGGTCTTCTGGAGACCCCTTTGAGCCTTGGATCCCTTGAGTTCCATTTTGAAACTGTATATTTTTGAAATATGAACAAATACATATATAGCCTGAGATAAACAACAAATCAAAATTTATGAAAATTACACATAAACTTTATACATAACCTTGCTCTTCTTTCTATTTATTTCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACTGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCCACAGTGGTACAGCCCTGAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1079534, "gff_end": 1080349, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02844", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3-11*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3-11*01", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATTAGTGAAAACTCTTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTATATCAACAATTTTGGCTCTACTCAAAGACAGTTGGTTTGATCTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCACAGTGATTCCACATGAAACAAAAACC", "coding_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3", "subgroup_designation": "11", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC", "aligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTT..................AGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCA.....................TCCAACAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1585", "sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCG", "repository_name": "GenBank", "repository_ref": "X92342", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1586", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATTAGTGAAAACTCTTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTATATCAACAATTTTGGCTCTACTCAAAGACAGTTGGTTTGATCTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCACAGTGATTCCACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 87271, "gff_end": 87814, "strand": null }, { "sequence_id": "1587", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATTAGTGAAAACTCTTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTATATCAACAATTTTGGCTCTACTCAAAGACAGTTGGTTTGATCTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCACAGTGATTCCACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 314021, "gff_end": 314564, "strand": null }, { "sequence_id": "1588", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATTAGTGAAAACTCTTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTATATCAACAATTTTGGCTCTACTCAAAGACAGTTGGTTTGATCTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCACAGTGATTCCACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377737, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02845", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3-15*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3-15*01", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "coding_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3", "subgroup_designation": "15", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "aligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTT..................AGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCA.....................TCCACCAGGGCCACTGGTATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1589", "sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "repository_name": "GenBank", "repository_ref": "X93638", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1590", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 145277, "gff_end": 145820, "strand": null }, { "sequence_id": "1591", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377737, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24\r\nMapped' by expression level", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02846", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3-20*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3-20*01", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTCAGTCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAATGGGTTTGATTTAGATTACATGGGTGACTTTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "coding_sequence": "GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3", "subgroup_designation": "20", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 248, "gene_end": 537, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 237, "leader_2_end": 247, "v_rs_start": 538, "v_rs_end": 565, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "aligned_sequence": "GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGC...............AGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCA.....................TCCAGCAGGGCCACTGGCATCCCA...GACAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1592", "sequence": "GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "repository_name": "GenBank", "repository_ref": "X93639", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 290, "strand": null }, { "sequence_id": "1593", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTCAGTCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAATGGGTTTGATTTAGATTACATGGGTGACTTTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 202674, "gff_end": 203238, "strand": null }, { "sequence_id": "1594", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTCAGTCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAATGGGTTTGATTTAGATTACATGGGTGACTTTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 198605, "gff_end": 199169, "strand": null }, { "sequence_id": "1595", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTCAGTCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAATGGGTTTGATTTAGATTACATGGGTGACTTTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377755, "gff_end": 1377191, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02847", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3-7*04.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3-7*04", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTTGGATACCACCAGAGAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "coding_sequence": "GAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3", "subgroup_designation": "7", "allele_designation": "04", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 519, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 51, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 520, "v_rs_end": 547, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "aligned_sequence": "GAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGC...............AGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCA.....................TCCACCAGGGCCACTAGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1596", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTTGGATACCACCAGAGAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 38568, "gff_end": 39114, "strand": null }, { "sequence_id": "1597", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTTGGATACCACCAGAGAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 362700, "gff_end": 363246, "strand": null }, { "sequence_id": "1598", "sequence": "ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTTGGATACCACCAGAGAAATTGTAATGACACAGTCTCCACCCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAACCTGGTATCAGCAGAAACCTGGCCAGGCGCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTAGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377737, "gff_end": 1377191, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02848", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-11*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-11*01", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGTCTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAATAGATCAACAATTTTGGCTCTACTCAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGGGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCCCACAGTGATTCCACATGAAACAAAAACC", "coding_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGGGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "11", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGGGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "aligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGGGTGTT..................AGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCA.....................TCCAACAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......CCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1599", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGTCTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAATAGATCAACAATTTTGGCTCTACTCAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGGGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCCCACAGTGATTCCACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 75383, "gff_end": 75926, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample NG_000833\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02849", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-11*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-11*02", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAATAGATCAACAATTTTGGCTCTACTCAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCCCACAGTGATTCCACATGAAACAAAAACC", "coding_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "11", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "aligned_sequence": "GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTT..................AGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCA.....................TCCAACAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......CCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1600", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAATAGATCAACAATTTTGGCTCTACTCAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGCCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCATCCCACAGTGATTCCACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 52751, "gff_end": 53294, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I74", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02850", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-15*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-15*01", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "coding_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "15", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "aligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTT..................AGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCA.....................TCCACCAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1601", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "X72815", "patch_no": "1", "gff_seqid": null, "gff_start": 71, "gff_end": 614, "strand": null }, { "sequence_id": "1602", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 133378, "gff_end": 133921, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X72815\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02851", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-15*03.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-15*03", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCATCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "coding_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCATCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "15", "allele_designation": "03", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 230, "gene_end": 516, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 219, "leader_2_end": 229, "v_rs_start": 517, "v_rs_end": 544, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCATCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "aligned_sequence": "GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTT..................AGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCA.....................TCCATCAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1603", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCATCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 110763, "gff_end": 111306, "strand": null }, { "sequence_id": "1604", "sequence": "ATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCTGCCACCTCTGCTCAGCAAGAAATATAATTAAAATTCAATGTAGATCAACAATTTTGGCTCTACTTAAAGACAGTGGGTTTGATTTTGATTACATGAGTGCATTTCTGTTTTATTTCCAATTTCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCATCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCATCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1257527, "gff_end": 1258070, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I74", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02852", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-20*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-20*01", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTGAATCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAGTGGGTTTGATTTAGATTACATGGGTGACTTTTCTATTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "coding_sequence": "GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "20", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 248, "gene_end": 537, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 237, "leader_2_end": 247, "v_rs_start": 538, "v_rs_end": 565, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "aligned_sequence": "GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGC...............AGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCA.....................TCCAGCAGGGCCACTGGCATCCCA...GACAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1605", "sequence": "GAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC", "repository_name": "GenBank", "repository_ref": "X93637", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 290, "strand": null }, { "sequence_id": "1606", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTGAATCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAGTGGGTTTGATTTAGATTACATGGGTGACTTTTCTATTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243981", "patch_no": "3", "gff_seqid": null, "gff_start": 186684, "gff_end": 187248, "strand": null }, { "sequence_id": "1607", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTGAATCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAGTGGGTTTGATTTAGATTACATGGGTGACTTTTCTATTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 209325, "gff_end": 209889, "strand": null }, { "sequence_id": "1608", "sequence": "ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAACATGGGATGGTTTTGCATGTCAGTGAAAACCCTCTCAAGTCCTGTTACCTGGCAACTCTGCTGAATCAATACAATAATTAAAGCTCAATATAAAGCAATAATTCTGGCTCTTCTGGGAAGACAGTGGGTTTGATTTAGATTACATGGGTGACTTTTCTATTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCGGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCTGGCGCCCAGGCTCCTCATCTATGATGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCCACAGTGATTCAGCTTGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1181585, "gff_end": 1182149, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243981\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02853", "allele_description_ref": "OGRDB:Homo sapiens:IGKV3D-7*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV3D-7*01", "sequence": "ATGGAACCATGGAAGCCCCAGCACAGCTTCTTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCATCAGGAGTTTTCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTAGATGAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "coding_sequence": "GAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "3D", "subgroup_designation": "7", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 245, "gene_end": 534, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 58, "leader_2_start": 234, "leader_2_end": 244, "v_rs_start": 535, "v_rs_end": 562, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "aligned_sequence": "GAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGC...............AGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCA.....................TCCACCAGGGCCACTGGCATCCCA...GCCAGGTTCAGTGGCAGTGGG......TCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 99, "fwr2_start": 100, "fwr2_end": 150, "cdr2_start": 151, "cdr2_end": 159, "fwr3_start": 160, "fwr3_end": 267, "cdr3_start": 268, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1609", "sequence": "ATGGAACCATGGAAGCCCCAGCACAGCTTCTTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCATCAGGAGTTTTCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTAGATGAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "X72820", "patch_no": "1", "gff_seqid": null, "gff_start": 441, "gff_end": 1002, "strand": null }, { "sequence_id": "1610", "sequence": "GAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCC", "repository_name": "GenBank", "repository_ref": "Z27500", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 290, "strand": null }, { "sequence_id": "1611", "sequence": "ATGGAACCATGGAAGCCCCAGCACAGCTTCTTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCATCAGGAGTTTTCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTAGATGAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC247037", "patch_no": "2", "gff_seqid": null, "gff_start": 151625, "gff_end": 152186, "strand": null }, { "sequence_id": "1612", "sequence": "ATGGAACCATGGAAGCCCCAGCACAGCTTCTTCTTCCTCCTGCTACTCTGGCTCCCAGGTGAGGGGAATATGAGGTGGTTTTGCACATCAGTGAAAACTCCATCAGGAGTTTTCTCTGCTCAGCAAGAAATATAATTAAAATTCAAAGTAGATGAACAATTTTGGCTCTACTCAAAGACAGCTGGTTTGATCTAGATTACATGAGTGCATTTCTGTTTTATTTCCAATCTCAGATACCACCGGAGAAATTGTAATGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTATCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGGATTATAACTTACCTCCCACAGTGATTCAACATGAAACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 13401, "gff_end": 13962, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample X72820\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02854", "allele_description_ref": "OGRDB:Homo sapiens:IGKV4-1*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV4-1*01", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "coding_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "4", "subgroup_designation": "1", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 280, "gene_end": 584, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 269, "leader_2_end": 279, "v_rs_start": 585, "v_rs_end": 612, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC", "aligned_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCA.....................TCTACCCGGGAATCCGGGGTCCCT...GACCGATTCAGTGGCAGCGGG......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1613", "sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC", "repository_name": "GenBank", "repository_ref": "X93640", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 305, "strand": null }, { "sequence_id": "1614", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "repository_name": "GenBank", "repository_ref": "AC243970", "patch_no": "3", "gff_seqid": null, "gff_start": 78803, "gff_end": 79414, "strand": null }, { "sequence_id": "1615", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 455518, "gff_end": 456129, "strand": null }, { "sequence_id": "1616", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 28212, "gff_end": 28823, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243970\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02855", "allele_description_ref": "OGRDB:Homo sapiens:IGKV4-1*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV4-1*02", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAGTATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "coding_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAGTATTATAGTACTCCTCC", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "4", "subgroup_designation": "1", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 280, "gene_end": 584, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 269, "leader_2_end": 279, "v_rs_start": 585, "v_rs_end": 612, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAGTATTATAGTACTCCTCC", "aligned_sequence": "GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCA.....................TCTACCCGGGAATCCGGGGTCCCT...GACCGATTCAGTGGCAGCGGG......TCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAGTATTATAGTACTCCTCC", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 114, "fwr2_start": 115, "fwr2_end": 165, "cdr2_start": 166, "cdr2_end": 174, "fwr3_start": 175, "fwr3_end": 282, "cdr3_start": 283, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1617", "sequence": "ATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGAGGAATTAAAAAGTGCCACAGTCTTTTCAGAGTAATATCTGTGTAGAAATAAAAAAAATTAAGATATAGTTGGAAATAATGACTATTTCCAATATGGATCCAATTATCTGCTGACTTATAATACTACTAGAAAGCAAATTTAAATGACATATTTCAATTATATCTGAGACAGCGTGTATAAGTTTATGTATAATCATTGTCCATTACTGACTACAGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAGTATTATAGTACTCCTCCCACAGTGCTTCAGCCTCGAACACAAACC", "repository_name": "GenBank", "repository_ref": "MW316673", "patch_no": "1", "gff_seqid": null, "gff_start": 309, "gff_end": 920, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample MW316673\r\nVDJbase example haplotype: P1_I74 (*01_A318G)\r\nMapped' by haplotyping", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02856", "allele_description_ref": "OGRDB:Homo sapiens:IGKV5-2*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV5-2*01", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATATCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "coding_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "5", "subgroup_designation": "2", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 206, "gene_end": 492, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 195, "leader_2_end": 205, "v_rs_start": 493, "v_rs_end": 520, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "aligned_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATT..................GATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCT.....................ACTACTCTCGTTCCTGGAATCCCA...CCTCGATTCAGTGGCAGCGGG......TATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1618", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATATCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "repository_name": "GenBank", "repository_ref": "AC243970", "patch_no": "3", "gff_seqid": null, "gff_start": 67172, "gff_end": 67691, "strand": null }, { "sequence_id": "1619", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATATCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 443887, "gff_end": 444406, "strand": null }, { "sequence_id": "1620", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATATCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 39935, "gff_end": 40454, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC243970\r\nVDJbase example haplotype: P1_I24", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02857", "allele_description_ref": "OGRDB:Homo sapiens:IGKV5-2*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV5-2*02", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATCTCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCTCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "coding_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCTCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "5", "subgroup_designation": "2", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 206, "gene_end": 492, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 195, "leader_2_end": 205, "v_rs_start": 493, "v_rs_end": 520, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCTCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "aligned_sequence": "GAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATT..................GATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCT.....................ACTACTCTCGTTCCTGGAATCTCA...CCTCGATTCAGTGGCAGCGGG......TATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCT", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1621", "sequence": "ATGGGGTCCCAGGTTCACCTCCTCAGCTTCCTCCTCCTTTGGATCTCTGGTAAGAGAAACACTTCCTCTCCTCTGTGCCACCAAGTCCCCTGCATCTCCACAAAAATAATATATTTTCATAAGGAATTGATTTTCCTCATTCTCTGCAAATATGATGCATTTGATTTATGTTTTTTACTTTGCTCCATAATCAGATACCAGGGCAGAAACGACACTCACGCAGTCTCCAGCATTCATGTCAGCGACTCCAGGAGACAAAGTCAACATCTCCTGCAAAGCCAGCCAAGACATTGATGATGATATGAACTGGTACCAACAGAAACCAGGAGAAGCTGCTATTTTCATTATTCAAGAAGCTACTACTCTCGTTCCTGGAATCTCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAATTAATAACATAGAATCTGAGGATGCTGCATATTACTTCTGTCTACAACATGATAATTTCCCTCTCACAGTGATACACCCTGTTACAAAAACC", "repository_name": "GenBank", "repository_ref": "OL352726", "patch_no": "1", "gff_seqid": null, "gff_start": 21494, "gff_end": 22013, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample OL352726\r\nVDJbase example haplotype: P1_I13 (*01_C214T)\r\nMapped' by haplotyping", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02858", "allele_description_ref": "OGRDB:Homo sapiens:IGKV6-21*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV6-21*01", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "coding_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "6", "subgroup_designation": "21", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 268, "gene_end": 554, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 46, "leader_2_start": 257, "leader_2_end": 267, "v_rs_start": 555, "v_rs_end": 582, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "aligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATT..................GGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCT.....................TCCCAGTCCTTCTCAGGGGTCCCC...TCGAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1622", "sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "repository_name": "GenBank", "repository_ref": "X93642", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1623", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "AC245015", "patch_no": "2", "gff_seqid": null, "gff_start": 219851, "gff_end": 220432, "strand": null }, { "sequence_id": "1624", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1377775, "gff_end": 1377194, "strand": null } ], "rearranged_support": [], "paralogs": [ "IGKV6D-21*01" ], "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245015", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02859", "allele_description_ref": "OGRDB:Homo sapiens:IGKV6-21*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV6-21*02", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "coding_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "6", "subgroup_designation": "21", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 268, "gene_end": 554, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": null, "leader_1_end": null, "leader_2_start": 257, "leader_2_end": 267, "v_rs_start": 555, "v_rs_end": 582, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "aligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATT..................GGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCT.....................TCCCAGTCCATCTCAGGGGTCCCC...TCGAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1625", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "KM455568", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 582, "strand": null }, { "sequence_id": "1626", "sequence": "ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "NG_000834", "patch_no": "1", "gff_seqid": null, "gff_start": 181417, "gff_end": 181998, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample KM455568\r\nVDJbase example haplotype: P1_I65 as 6E-21*02", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02861", "allele_description_ref": "OGRDB:Homo sapiens:IGKV6D-21*02.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV6D-21*02", "sequence": "ATGTCGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "coding_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "6D", "subgroup_designation": "21", "allele_designation": "02", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 268, "gene_end": 554, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 46, "leader_2_start": 257, "leader_2_end": 267, "v_rs_start": 555, "v_rs_end": 582, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "aligned_sequence": "GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATT..................GGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCT.....................TCCCAGTCCATCTCAGGGGTCCCC...TCGAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1629", "sequence": "ATGTCGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 61005, "gff_end": 61586, "strand": null }, { "sequence_id": "1630", "sequence": "ATGTCGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 226641, "gff_end": 227222, "strand": null }, { "sequence_id": "1631", "sequence": "ATGTCGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGGTGAGAATATTTCCACAAACCTAGGCGGAGATATTCTTTCAATCTGTAATTTCTTTCATTGGGGACTCTGCAATAGGTGATTTTTGGCTTGATTTTAAAATCCTAATTTTAAAAATGTAATGCATATTCTTTCTTCATGTCTAGCAAGATTAAAGGTGATTTTCATACACAGATATTTATGTTGTACTGATGTTTGCTGTATATTTTCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCTCACACTGTGTTACAACCCAGAACAAAAACT", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1164274, "gff_end": 1164855, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506", "curational_tags": [ "likely_full_length" ] }, { "allele_description_id": "OGRDB:A02862", "allele_description_ref": "OGRDB:Homo sapiens:IGKV6D-41*01.1_ext", "maintainer": "William Lees", "acknowledgements": null, "lab_address": "Birkbeck College, University of London, Malet Street, London", "release_version": 1, "release_date": "10-Jul-2023", "release_description": "Bulk upload of sequences for the AIRR-C Human IG germline sets", "label": "IGKV6D-41*01", "sequence": "ATGGTGTCCCCGTTGCAATTCCTGCGGCTTCTGCTCCTCTGGGTTCCAGGTGAGAATATTTAGAAAAAGCTAAAACTAATTCTTTGAACCATTAATTTTCTTAATTAGGAACCTGGCACCATATGGAACTTGGCTTGTTTTTAAATGTGATTTTTTTTTAAGTAATGCGTATTCTTTCATCTTGTGCTACTAGATTAGTGGTGATTTCATTAAGCAGATGCTTATATTGTGCTAATGTTTGCTGTATGGTTTCAGCCTCCAGGGGTGATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCACACTGTGCTACAACCCAAAACAAAAATT", "coding_sequence": "GATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCA", "ext_3prime": null, "aliases": null, "locus": "IGK", "chromosome": 2, "sequence_type": "V", "functional": true, "inference_type": null, "species": { "id": "NCBITAXON:9606", "label": "Homo sapiens" }, "species_subgroup": null, "species_subgroup_type": null, "status": null, "gene_designation": "6D", "subgroup_designation": "41", "allele_designation": "01", "allele_similarity_cluster_designation": null, "allele_similarity_cluster_member_id": null, "gene_start": 267, "gene_end": 553, "utr_5_prime_start": null, "utr_5_prime_end": null, "leader_1_start": 1, "leader_1_end": 49, "leader_2_start": 256, "leader_2_end": 266, "v_rs_start": 554, "v_rs_end": 581, "v_gene_delineations": [ { "sequence_delineation_id": "1", "delineation_scheme": "IMGT", "unaligned_sequence": "GATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCA", "aligned_sequence": "GATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATT..................GGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCT.....................TCCCAGTCCATCTCAGGGGTCCCC...TCGAGGTTCAGTGGCAGTGGA......TCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCA", "fwr1_start": 1, "fwr1_end": 78, "cdr1_start": 79, "cdr1_end": 96, "fwr2_start": 97, "fwr2_end": 147, "cdr2_start": 148, "cdr2_end": 156, "fwr3_start": 157, "fwr3_end": 264, "cdr3_start": 265, "alignment_labels": [ "1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", "25", "26", "27", "28", "29", "30", "31", "32", "33", "34", "35", "36", "37", "38", "39", "40", "41", "42", "43", "44", "45", "46", "47", "48", "49", "50", "51", "52", "53", "54", "55", "56", "57", "58", "59", "60", "61", "62", "63", "64", "65", "66", "67", "68", "69", "70", "71", "72", "73", "74", "75", "76", "77", "78", "79", "80", "81", "82", "83", "84", "85", "86", "87", "88", "89", "90", "91", "92", "93", "94", "95", "96", "97", "98", "99", "100", "101", "102", "103", "104" ] } ], "unrearranged_support": [ { "sequence_id": "1632", "sequence": "GATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCA", "repository_name": "GenBank", "repository_ref": "X93641", "patch_no": "1", "gff_seqid": null, "gff_start": 1, "gff_end": 287, "strand": null }, { "sequence_id": "1633", "sequence": "ATGGTGTCCCCGTTGCAATTCCTGCGGCTTCTGCTCCTCTGGGTTCCAGGTGAGAATATTTAGAAAAAGCTAAAACTAATTCTTTGAACCATTAATTTTCTTAATTAGGAACCTGGCACCATATGGAACTTGGCTTGTTTTTAAATGTGATTTTTTTTTAAGTAATGCGTATTCTTTCATCTTGTGCTACTAGATTAGTGGTGATTTCATTAAGCAGATGCTTATATTGTGCTAATGTTTGCTGTATGGTTTCAGCCTCCAGGGGTGATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCACACTGTGCTACAACCCAAAACAAAAATT", "repository_name": "GenBank", "repository_ref": "AC245506", "patch_no": "3", "gff_seqid": null, "gff_start": 12952, "gff_end": 13532, "strand": null }, { "sequence_id": "1634", "sequence": "ATGGTGTCCCCGTTGCAATTCCTGCGGCTTCTGCTCCTCTGGGTTCCAGGTGAGAATATTTAGAAAAAGCTAAAACTAATTCTTTGAACCATTAATTTTCTTAATTAGGAACCTGGCACCATATGGAACTTGGCTTGTTTTTAAATGTGATTTTTTTTTAAGTAATGCGTATTCTTTCATCTTGTGCTACTAGATTAGTGGTGATTTCATTAAGCAGATGCTTATATTGTGCTAATGTTTGCTGTATGGTTTCAGCCTCCAGGGGTGATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCACACTGTGCTACAACCCAAAACAAAAATT", "repository_name": "GenBank", "repository_ref": "NG_000833", "patch_no": "2", "gff_seqid": null, "gff_start": 178556, "gff_end": 179136, "strand": null }, { "sequence_id": "1635", "sequence": "ATGGTGTCCCCGTTGCAATTCCTGCGGCTTCTGCTCCTCTGGGTTCCAGGTGAGAATATTTAGAAAAAGCTAAAACTAATTCTTTGAACCATTAATTTTCTTAATTAGGAACCTGGCACCATATGGAACTTGGCTTGTTTTTAAATGTGATTTTTTTTTAAGTAATGCGTATTCTTTCATCTTGTGCTACTAGATTAGTGGTGATTTCATTAAGCAGATGCTTATATTGTGCTAATGTTTGCTGTATGGTTTCAGCCTCCAGGGGTGATGTTGTGATGACACAGTCTCCAGCTTTCCTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAAGGCATTGGCAACTACTTATACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCTTTACCATCAGTAGCCTGGAAGCTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCTCACACTGTGCTACAACCCAAAACAAAAATT", "repository_name": "GenBank", "repository_ref": "GRCh38:NC_000002.12", "patch_no": null, "gff_seqid": null, "gff_start": 1212328, "gff_end": 1212908, "strand": null } ], "rearranged_support": [], "paralogs": null, "curation": "Information for this sequence was imported into OGRDB via bulk update with the following notes:\r\nSequence annotation is based on Genbank sample AC245506\r\nVDJbase example haplotype: P1_I24 (1 seq)", "curational_tags": [ "likely_full_length" ] } ], "curation": null } ] }